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MELO3C033436 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033436
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Genome locationchr08:27503182..27505283
RNA-Seq ExpressionMELO3C033436
SyntenyMELO3C033436
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033996.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.3e-6479.04Show/hide
Query:  SYPRNNFMEMDVMFLKFGDNLD-NIAGGYSS--QQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIFPVRCLKW
        SY R+NFME D MFL+F D+LD NIAGG SS      TPTP+RRAQSRLLELERHVAINGRI MTI PGAEKPI PH VRFS+AI VCVRK FPVRCLKW
Subjt:  SYPRNNFMEMDVMFLKFGDNLD-NIAGGYSS--QQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIFPVRCLKW

Query:  AD-------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED
        AD       RLFVLDFNDQAMNRFVEHQMLTTFKEF+ +CHRHFKKYSD EEARANPPNALVGR ED
Subjt:  AD-------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED

KAA0056494.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.2e-6371.2Show/hide
Query:  MSSSYPRNNFMEMDVMFLKFGDNLDNIAG----------GYSSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVR
        MSSS+ RNNFME D MFL+F D+LDNIAG          G SSQQP TPT +RR QSRLLELERHVAINGRI MTI PG EKPI PHA+ F +AI VCVR
Subjt:  MSSSYPRNNFMEMDVMFLKFGDNLDNIAG----------GYSSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVR

Query:  KIFPVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED
        K F V CLKWAD              RLFVLDFNDQAMNRFVEHQM TTFKEF ++CHRHFKKYSD EEARANPPNALVGRHED
Subjt:  KIFPVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED

KAA0063477.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.8e-6373.33Show/hide
Query:  SYPRNNFMEMDVMFLKFGDNLDNIAGGY---------SSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIFP
        SY R+NFME D MFLKF D+LDNIAGG          SS Q  TPTP+RRAQSRLLELERHVAINGRI MTI PGAEKPI PHAV FS+AI VCVRK FP
Subjt:  SYPRNNFMEMDVMFLKFGDNLDNIAGGY---------SSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIFP

Query:  VRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED
        VRCLKWAD              RLFVLDFNDQAMNRFVEHQMLTTFKEF+ +CHRHFKKYSD +EARANPPNALVG  ED
Subjt:  VRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED

TYK18843.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.8e-6373.48Show/hide
Query:  SYPRNNFMEMDVMFLKFGDNLD-NIAGGY---------SSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIF
        SY R+NFME D MFL+F D+LD NIAGG          SS Q  TPTP+RRAQSRLLELERHVAINGRI MTI PGAEKPI PHAVRFS+AI VCVRK F
Subjt:  SYPRNNFMEMDVMFLKFGDNLD-NIAGGY---------SSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIF

Query:  PVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED
        PVRCLKW D              RLFVLDFNDQAMNRFVEHQMLTTFKEF+ +CHRHFKKYSD EEARANPPNALVGR ED
Subjt:  PVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED

TYK29029.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.2e-6371.2Show/hide
Query:  MSSSYPRNNFMEMDVMFLKFGDNLDNIAG----------GYSSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVR
        MSSS+ RNNFME D MFL+F D+LDNIAG          G SSQQP TPT +RR QSRLLELERHVAINGRI MTI PG EKPI PHA+ F +AI VCVR
Subjt:  MSSSYPRNNFMEMDVMFLKFGDNLDNIAG----------GYSSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVR

Query:  KIFPVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED
        K F V CLKWAD              RLFVLDFNDQAMNRFVEHQM TTFKEF ++CHRHFKKYSD EEARANPPNALVGRHED
Subjt:  KIFPVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED

TrEMBL top hitse value%identityAlignment
A0A5A7SVK7 CACTA en-spm transposon protein2.1e-6479.04Show/hide
Query:  SYPRNNFMEMDVMFLKFGDNLD-NIAGGYSS--QQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIFPVRCLKW
        SY R+NFME D MFL+F D+LD NIAGG SS      TPTP+RRAQSRLLELERHVAINGRI MTI PGAEKPI PH VRFS+AI VCVRK FPVRCLKW
Subjt:  SYPRNNFMEMDVMFLKFGDNLD-NIAGGYSS--QQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIFPVRCLKW

Query:  AD-------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED
        AD       RLFVLDFNDQAMNRFVEHQMLTTFKEF+ +CHRHFKKYSD EEARANPPNALVGR ED
Subjt:  AD-------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED

A0A5A7UMS8 CACTA en-spm transposon protein1.0e-6371.2Show/hide
Query:  MSSSYPRNNFMEMDVMFLKFGDNLDNIAG----------GYSSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVR
        MSSS+ RNNFME D MFL+F D+LDNIAG          G SSQQP TPT +RR QSRLLELERHVAINGRI MTI PG EKPI PHA+ F +AI VCVR
Subjt:  MSSSYPRNNFMEMDVMFLKFGDNLDNIAG----------GYSSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVR

Query:  KIFPVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED
        K F V CLKWAD              RLFVLDFNDQAMNRFVEHQM TTFKEF ++CHRHFKKYSD EEARANPPNALVGRHED
Subjt:  KIFPVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED

A0A5A7V916 CACTA en-spm transposon protein1.4e-6373.33Show/hide
Query:  SYPRNNFMEMDVMFLKFGDNLDNIAGGY---------SSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIFP
        SY R+NFME D MFLKF D+LDNIAGG          SS Q  TPTP+RRAQSRLLELERHVAINGRI MTI PGAEKPI PHAV FS+AI VCVRK FP
Subjt:  SYPRNNFMEMDVMFLKFGDNLDNIAGGY---------SSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIFP

Query:  VRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED
        VRCLKWAD              RLFVLDFNDQAMNRFVEHQMLTTFKEF+ +CHRHFKKYSD +EARANPPNALVG  ED
Subjt:  VRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED

A0A5D3D5L1 CACTA en-spm transposon protein2.3e-6373.48Show/hide
Query:  SYPRNNFMEMDVMFLKFGDNLD-NIAGGY---------SSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIF
        SY R+NFME D MFL+F D+LD NIAGG          SS Q  TPTP+RRAQSRLLELERHVAINGRI MTI PGAEKPI PHAVRFS+AI VCVRK F
Subjt:  SYPRNNFMEMDVMFLKFGDNLD-NIAGGY---------SSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIF

Query:  PVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED
        PVRCLKW D              RLFVLDFNDQAMNRFVEHQMLTTFKEF+ +CHRHFKKYSD EEARANPPNALVGR ED
Subjt:  PVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED

A0A5D3E035 CACTA en-spm transposon protein1.0e-6371.2Show/hide
Query:  MSSSYPRNNFMEMDVMFLKFGDNLDNIAG----------GYSSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVR
        MSSS+ RNNFME D MFL+F D+LDNIAG          G SSQQP TPT +RR QSRLLELERHVAINGRI MTI PG EKPI PHA+ F +AI VCVR
Subjt:  MSSSYPRNNFMEMDVMFLKFGDNLDNIAG----------GYSSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVR

Query:  KIFPVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED
        K F V CLKWAD              RLFVLDFNDQAMNRFVEHQM TTFKEF ++CHRHFKKYSD EEARANPPNALVGRHED
Subjt:  KIFPVRCLKWAD--------------RLFVLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCGTCATATCCACGTAATAATTTTATGGAGATGGACGTTATGTTCCTCAAGTTTGGGGACAATTTAGATAACATCGCGGGAGGGTATTCTTCTCAACAA
CCTGTGACTCCGACTCCTAAGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTTTGATGACGATCGTCCCTGGAGCG
GAGAAGCCTATTTTCCCACACGCCGTTCGCTTCAGCGAGGCGATAAGCGTGTGCGTGCGAAAGATATTTCCCGTCCGCTGCCTTAAGTGGGCGGACCGATTGTTT
GTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTTCAGGTCAACTGTCACAGACATTTCAAAAAGTAC
AGCGACCTAGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACGTCATGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACATGTATAGATACATACACACACATGTACATACATACACATATACATGCACTACAAGAAAACGGAAATTTTCCGACATCAAAAAATACGTCGGGAATAAG
TGTATTCTCGACGCTAGGCACATTGCGTCAGGAGAGGCGTCGATAATATCCTTTTTCCCGATGCTTGAAGCACGCGTTGGGCAACCGACATCAGGAATAGAGTGC
GTCGAAAACGACGTCGGGCATAAGGGATTTTTCCGACGCACCGTAGCGCGTCGGGAAACCCTTTTAGAACTGAAACTGAAAGGGAAAGGAAGAAGAAAGAGCCGT
CAAGGCTTCGCTACCCGTAGCTCGCCGCCTTCCGTTCGTCGTCGTTGCCGTCCCTCGCCGTTTCGTCGTCGTCTGCCACCTTAGGAGAATTGTTAAATGGTTTTA
TAGTTAAATTGAAAATCGAATTGGGGGAGGGGGGGTTTCTAGTTAAATTGAAAATTGAATTTGGGGGAGGGGCCATTATGTCATCGTCATATCCACGTAATAATT
TTATGGAGATGGACGTTATGTTCCTCAAGTTTGGGGACAATTTAGATAACATCGCGGGAGGGTATTCTTCTCAACAACCTGTGACTCCGACTCCTAAGAGACGTG
CGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTTTGATGACGATCGTCCCTGGAGCGGAGAAGCCTATTTTCCCACACGCCGTTC
GCTTCAGCGAGGCGATAAGCGTGTGCGTGCGAAAGATATTTCCCGTCCGCTGCCTTAAGTGGGCGGACCGATTGTTTGTGCTTGATTTCAATGATCAAGCAATGA
ATAGGTTTGTTGAGCATCAGATGCTCACGACCTTTAAAGAGTTTCAGGTCAACTGTCACAGACATTTCAAAAAGTACAGCGACCTAGAGGAGGCTCGTGCCAACC
CACCAAACGCATTGGTTGGACGTCATGAGGATTGA
Protein sequenceShow/hide protein sequence
MSSSYPRNNFMEMDVMFLKFGDNLDNIAGGYSSQQPVTPTPKRRAQSRLLELERHVAINGRILMTIVPGAEKPIFPHAVRFSEAISVCVRKIFPVRCLKWADRLF
VLDFNDQAMNRFVEHQMLTTFKEFQVNCHRHFKKYSDLEEARANPPNALVGRHED