; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C033455 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033455
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr08:28462670..28464657
RNA-Seq ExpressionMELO3C033455
SyntenyMELO3C033455
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046937.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.3e-0540.4Show/hide
Query:  VEYKVNADDLKHEMRLLESSAPGICEELESIGF-----------------------LSGLMCSHH---------VNLVNNIKYQVIDGTSQYVVYLPTK
        +  K    D +HEMRLLESSA GI +E ESI F                       L+  M             VN +NN+KYQV D TSQYV+YLPTK
Subjt:  VEYKVNADDLKHEMRLLESSAPGICEELESIGF-----------------------LSGLMCSHH---------VNLVNNIKYQVIDGTSQYVVYLPTK
TrEMBL top hitse value%identityAlignment
A0A5A7TYE6 Ty3-gypsy retrotransposon protein2.1e-0540.4Show/hide
Query:  VEYKVNADDLKHEMRLLESSAPGICEELESIGF-----------------------LSGLMCSHH---------VNLVNNIKYQVIDGTSQYVVYLPTK
        +  K    D +HEMRLLESSA GI +E ESI F                       L+  M             VN +NN+KYQV D TSQYV+YLPTK
Subjt:  VEYKVNADDLKHEMRLLESSAPGICEELESIGF-----------------------LSGLMCSHH---------VNLVNNIKYQVIDGTSQYVVYLPTK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTATCGTTGAGGCCTGAAGGACTCCAACACACCAGCGACAGCAGCAGCTACCAAAGCCTTTATTTATTTAGTGCCATTGGCGTCAGTTCTGTTGTTGAATACAA
AGTTAATGCCGATGACTTAAAACACGAAATGCGATTGTTGGAATCTTCTGCCCCTGGTATATGTGAGGAGCTTGAATCCATTGGTTTTCTAAGTGGCCTCATGTGTAGTC
ACCATGTTAATCTGGTTAACAACATCAAATACCAGGTCATAGATGGAACCTCGCAATATGTGGTTTACTTACCTACGAAGAGGAGTAATAAATCCATTATGCGATCATCG
ATAATGGCAAATACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTATCGTTGAGGCCTGAAGGACTCCAACACACCAGCGACAGCAGCAGCTACCAAAGCCTTTATTTATTTAGTGCCATTGGCGTCAGTTCTGTTGTTGAATACAA
AGTTAATGCCGATGACTTAAAACACGAAATGCGATTGTTGGAATCTTCTGCCCCTGGTATATGTGAGGAGCTTGAATCCATTGGTTTTCTAAGTGGCCTCATGTGTAGTC
ACCATGTTAATCTGGTTAACAACATCAAATACCAGGTCATAGATGGAACCTCGCAATATGTGGTTTACTTACCTACGAAGAGGAGTAATAAATCCATTATGCGATCATCG
ATAATGGCAAATACCTGA
Protein sequenceShow/hide protein sequence
MRLSLRPEGLQHTSDSSSYQSLYLFSAIGVSSVVEYKVNADDLKHEMRLLESSAPGICEELESIGFLSGLMCSHHVNLVNNIKYQVIDGTSQYVVYLPTKRSNKSIMRSS
IMANT