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MELO3C033488 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033488
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionsignal recognition particle 19 kDa protein
Genome locationchr08:31732115..31734632
RNA-Seq ExpressionMELO3C033488
SyntenyMELO3C033488
Gene Ontology termsGO:0048500 - signal recognition particle (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582147.1 Signal recognition particle 19 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]5.8e-1461.9Show/hide
Query:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
        H ++ F  +IDKAYPRDFMQRG     +++ +G          KQLMLRIAE+VPRH GR KKQEPASSSTAGPSKG  GRKKK
Subjt:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
XP_004147628.1 signal recognition particle 19 kDa protein [Cucumis sativus]1.2e-1463.1Show/hide
Query:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
        H ++ F  +IDKAYPRDFMQRG     +++ +G          KQLMLRIAE+VPRH GRTKKQEPASSSTAGPSKG  GRKKK
Subjt:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
XP_008438988.1 PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo]1.5e-1461.9Show/hide
Query:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
        H ++ F  +IDKAYPRDFMQRG     +++ +G          KQLMLR+AE+VPRH GRTKKQEPASSSTAGPSKG  GRKKK
Subjt:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
XP_022955603.1 signal recognition particle 19 kDa protein [Cucurbita moschata]5.8e-1461.9Show/hide
Query:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
        H ++ F  +IDKAYPRDFMQRG     +++ +G          KQLMLRIAE+VPRH GR KKQEPASSSTAGPSKG  GRKKK
Subjt:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
XP_038879562.1 signal recognition particle 19 kDa protein [Benincasa hispida]1.2e-1463.1Show/hide
Query:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
        H ++ F  +IDKAYPRDFMQRG     +++ +G          KQLMLRIAE+VPRH GRTKKQEPASSSTAGPSKG  GRKKK
Subjt:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
TrEMBL top hitse value%identityAlignment
A0A0A0L5F9 Uncharacterized protein5.7e-1563.1Show/hide
Query:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
        H ++ F  +IDKAYPRDFMQRG     +++ +G          KQLMLRIAE+VPRH GRTKKQEPASSSTAGPSKG  GRKKK
Subjt:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
A0A1S3AYC2 signal recognition particle 19 kDa protein7.4e-1561.9Show/hide
Query:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
        H ++ F  +IDKAYPRDFMQRG     +++ +G          KQLMLR+AE+VPRH GRTKKQEPASSSTAGPSKG  GRKKK
Subjt:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
A0A6J1CAM2 signal recognition particle 19 kDa protein2.4e-1361.18Show/hide
Query:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSK-GNYGRKKK
        H ++ F  +IDKAYPRDFMQRG     +++ +G          KQ+MLRIAE+VPRH GRTKKQEPASSSTAGPSK G  GRKKK
Subjt:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSK-GNYGRKKK
A0A6J1GUF8 signal recognition particle 19 kDa protein2.8e-1461.9Show/hide
Query:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
        H ++ F  +IDKAYPRDFMQRG     +++ +G          KQLMLRIAE+VPRH GR KKQEPASSSTAGPSKG  GRKKK
Subjt:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
A0A6J1IY39 signal recognition particle 19 kDa protein2.8e-1461.9Show/hide
Query:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
        H ++ F  +IDKAYPRDFMQRG     +++ +G          KQLMLRIAE+VPRH GR KKQEPASSSTAGPSKG  GRKKK
Subjt:  HKEMAFP-QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
SwissProt top hitse value%identityAlignment
P49964 Signal recognition particle 19 kDa protein6.7e-1355.26Show/hide
Query:  QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
        ++DKAYPRDF Q G     +++ +G          KQLM++IAE+VP+H GRTKKQEPA+SSTAG SKG  G+KKK
Subjt:  QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK
Q943Z6 Signal recognition particle 19 kDa protein3.9e-0544.19Show/hide
Query:  QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQE---------PASSSTAG-PSKGNYGRKKK
        +IDKAYPRDFMQ G     ++  +G          K LM +IAE+VPRH  R KKQE          A++ST+G  SK   G KKK
Subjt:  QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQE---------PASSSTAG-PSKGNYGRKKK
Arabidopsis top hitse value%identityAlignment
AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative2.8e-0644.19Show/hide
Query:  QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQE---------PASSSTAG-PSKGNYGRKKK
        +IDKAYPRDFMQ G     ++  +G          K LM +IAE+VPRH  R KKQE          A++ST+G  SK   G KKK
Subjt:  QIDKAYPRDFMQRG-----MRESEG----------KQLMLRIAEVVPRHLGRTKKQE---------PASSSTAG-PSKGNYGRKKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAATTGGTATAAGAATCCTTCAGTTAGGGATGTTAAGGGGTATCTTTCATGTGGTATCGTAGGAATTTGGTTGGAACATGGATGGAGAAATTCCCAACATAAAGA
GATGGCATTCCCGCAAATTGATAAAGCTTATCCTCGTGATTTCATGCAAAGAGGCATGAGGGAGAGTGAGGGAAAACAACTGATGCTTCGTATAGCAGAAGTTGTTCCTA
GACATCTTGGAAGGACAAAGAAGCAGGAGCCTGCATCATCATCAACTGCAGGACCTTCAAAAGGCAATTATGGAAGAAAGAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAATTGGTATAAGAATCCTTCAGTTAGGGATGTTAAGGGGTATCTTTCATGTGGTATCGTAGGAATTTGGTTGGAACATGGATGGAGAAATTCCCAACATAAAGA
GATGGCATTCCCGCAAATTGATAAAGCTTATCCTCGTGATTTCATGCAAAGAGGCATGAGGGAGAGTGAGGGAAAACAACTGATGCTTCGTATAGCAGAAGTTGTTCCTA
GACATCTTGGAAGGACAAAGAAGCAGGAGCCTGCATCATCATCAACTGCAGGACCTTCAAAAGGCAATTATGGAAGAAAGAAGAAATAGTTACAATACATAATTACAAGA
AACAGATTGTTATTGACCAAGCCTCATATCTTAATTCGTAATGACATTTGAGTATTTGTGTTCTGCTCCGGCTCCCAAAGAAACTAGACAATCGGTTTGTTTTGAACAAT
TTTTTAAAATAGTGGATCCTGGGTTTTTTT
Protein sequenceShow/hide protein sequence
MVNWYKNPSVRDVKGYLSCGIVGIWLEHGWRNSQHKEMAFPQIDKAYPRDFMQRGMRESEGKQLMLRIAEVVPRHLGRTKKQEPASSSTAGPSKGNYGRKKK