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MELO3C033491 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033491
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Genome locationchr05:4649993..4650832
RNA-Seq ExpressionMELO3C033491
SyntenyMELO3C033491
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045433.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]7.7e-6891.16Show/hide
Query:  MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQ
        ++  Y+ IVIMSYRRSNFMETDDMFLQFEEDL+NI GGSSSVGDNT GSSSQQTTPTPRRRAQSRLLELERH+AING IPMTIAPGAEKPISPH IRFSQ
Subjt:  MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQ

Query:  AIGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR
        AIGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFV+DFNDQAMNR
Subjt:  AIGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR

TYJ96549.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.2e-6692.91Show/hide
Query:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCV
        ++ IMSYRRSNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAING IPMTIAPGAEKPISPHA RFSQAIGVCV
Subjt:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCV

Query:  RKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR
        RKTFPVRCLKW DVGREYIEVVKGDLQR FV+DFNDQAMNR
Subjt:  RKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR

TYJ99698.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.8e-6793.62Show/hide
Query:  SIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCV
        ++VIMSYRRS+FMETDDMFLQFEEDLDNIAGGSSSVGDNT GSSSQQTTPTPRRRAQSRLLELERHVAING IPMTIAPGAEKPISPHA+RFSQAIGVCV
Subjt:  SIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCV

Query:  RKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR
        RKTFPVRCLKW DVGREYIEVVKGDLQR FV+DFNDQAMNR
Subjt:  RKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR

TYK11476.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]7.2e-6694.2Show/hide
Query:  IMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCVRKT
        IMSYR SNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAING IPMTIAPGAEKPISPHA+RFSQAIGVCVRKT
Subjt:  IMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCVRKT

Query:  FPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR
        FPVRCLKW DVGREYIEVVKGDLQR FV+DFNDQAMNR
Subjt:  FPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR

TYK18843.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.5e-6692.96Show/hide
Query:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVC
        ++ IMSYRRSNFMETDDMFLQFE+DLD NIAGGSSSVGDNT GSSSQQTTPTPRRRAQSRLLELERHVAING IPMTIAPGAEKPISPHA+RFSQAIGVC
Subjt:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVC

Query:  VRKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR
        VRKTFPVRCLKW DVGREYIEVVKGDLQRLFV+DFNDQAMNR
Subjt:  VRKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR

TrEMBL top hitse value%identityAlignment
A0A5A7TPH1 CACTA en-spm transposon protein3.7e-6891.16Show/hide
Query:  MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQ
        ++  Y+ IVIMSYRRSNFMETDDMFLQFEEDL+NI GGSSSVGDNT GSSSQQTTPTPRRRAQSRLLELERH+AING IPMTIAPGAEKPISPH IRFSQ
Subjt:  MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQ

Query:  AIGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR
        AIGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFV+DFNDQAMNR
Subjt:  AIGVCVRKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR

A0A5D3BBZ9 CACTA en-spm transposon protein1.6e-6692.91Show/hide
Query:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCV
        ++ IMSYRRSNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAING IPMTIAPGAEKPISPHA RFSQAIGVCV
Subjt:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCV

Query:  RKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR
        RKTFPVRCLKW DVGREYIEVVKGDLQR FV+DFNDQAMNR
Subjt:  RKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR

A0A5D3BNG3 CACTA en-spm transposon protein1.8e-6793.62Show/hide
Query:  SIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCV
        ++VIMSYRRS+FMETDDMFLQFEEDLDNIAGGSSSVGDNT GSSSQQTTPTPRRRAQSRLLELERHVAING IPMTIAPGAEKPISPHA+RFSQAIGVCV
Subjt:  SIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCV

Query:  RKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR
        RKTFPVRCLKW DVGREYIEVVKGDLQR FV+DFNDQAMNR
Subjt:  RKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR

A0A5D3CM32 CACTA en-spm transposon protein3.5e-6694.2Show/hide
Query:  IMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCVRKT
        IMSYR SNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAING IPMTIAPGAEKPISPHA+RFSQAIGVCVRKT
Subjt:  IMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCVRKT

Query:  FPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR
        FPVRCLKW DVGREYIEVVKGDLQR FV+DFNDQAMNR
Subjt:  FPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR

A0A5D3D5L1 CACTA en-spm transposon protein2.7e-6692.96Show/hide
Query:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVC
        ++ IMSYRRSNFMETDDMFLQFE+DLD NIAGGSSSVGDNT GSSSQQTTPTPRRRAQSRLLELERHVAING IPMTIAPGAEKPISPHA+RFSQAIGVC
Subjt:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNT-GSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVC

Query:  VRKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR
        VRKTFPVRCLKW DVGREYIEVVKGDLQRLFV+DFNDQAMNR
Subjt:  VRKTFPVRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTTTTTATATGTCCATAGTCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGG
AGGGTCGTCATCTGTGGGCGACAATACGGGATCTTCTTCTCAACAAACGACTCCGACTCCTAGGAGACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAA
TAAATGGGTGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCATTCGCTTCAGCCAAGCGATAGGCGTGTGCGTGCGAAAGACATTTCCC
GTCCGCTGTCTTAAGTGGGCGGATGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTGCAGCGATTGTTTGTGATTGATTTCAATGATCAAGCAATGAACAGGTG
A
mRNA sequenceShow/hide mRNA sequence
TATTTTGATTCTAGCTATGCGTTTGTATTTGGTTATTGAATGTTTGTTTTTTATATGTCCATAGTCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATAT
GTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGGAGGGTCGTCATCTGTGGGCGACAATACGGGATCTTCTTCTCAACAAACGACTCCGACTCCTAGGAGACGTG
CGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGTGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCATTCGCTTC
AGCCAAGCGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGGGCGGATGTTGGGAGAGAATACATTGAGGTCGTCAAGGGCGACCTGCAGCGATT
GTTTGTGATTGATTTCAATGATCAAGCAATGAACAGGTGACCTTTAAAAAGTTCCGGGCCGACTGTCATAGACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGC
CAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGGCACTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGTAATTTGT
Protein sequenceShow/hide protein sequence
MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRRRAQSRLLELERHVAINGCIPMTIAPGAEKPISPHAIRFSQAIGVCVRKTFP
VRCLKWADVGREYIEVVKGDLQRLFVIDFNDQAMNR