CuGenDBv2

Gene ID	MELO3C033507
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	DNA-directed DNA polymerase
Genome location	chr08:32767241..32774480
RNA-Seq Expression	MELO3C033507
Synteny	MELO3C033507
Gene Ontology terms	GO:0006261 - DNA-dependent DNA replication (biological process) GO:0071897 - DNA biosynthetic process (biological process) GO:0003677 - DNA binding (molecular function) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	IPR002298 - DNA polymerase A

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144345.1 uncharacterized protein LOC101222649 isoform X1 [Cucumis sativus]

2.3e-26

92.96

Show/hide

Query:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        ++ MLVTNAEQAILSK  ATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
Subjt:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

XP_008449676.1 PREDICTED: DNA polymerase I [Cucumis melo]

2.3e-26

92.96

Show/hide

Query:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        ++ MLVTNAEQAILSK  ATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
Subjt:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

XP_011653865.1 uncharacterized protein LOC101222649 isoform X2 [Cucumis sativus]

2.3e-26

92.96

Show/hide

Query:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        ++ MLVTNAEQAILSK  ATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
Subjt:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

XP_022933106.1 uncharacterized protein LOC111439872 isoform X1 [Cucurbita moschata]

1.1e-23

87.32

Show/hide

Query:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        +  MLVTNAEQAILSK  A LRSDLP YMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAE FSADPI+RR
Subjt:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

XP_023543412.1 uncharacterized protein LOC111803303 isoform X2 [Cucurbita pepo subsp. pepo]

1.1e-23

87.32

Show/hide

Query:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        +  MLVTNAEQAILSK  A LRSDLP YMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAE FSADPI+RR
Subjt:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L3M4 Uncharacterized protein

1.5e-26

97.06

Show/hide

Query:  MLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        MLVTNAEQAILSK  ATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
Subjt:  MLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

A0A1S3BMJ7 DNA-directed DNA polymerase

1.1e-26

92.96

Show/hide

Query:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        ++ MLVTNAEQAILSK  ATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
Subjt:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

A0A6J1EY78 DNA-directed DNA polymerase

5.2e-24

87.32

Show/hide

Query:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        +  MLVTNAEQAILSK  A LRSDLP YMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAE FSADPI+RR
Subjt:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

A0A6J1F3S3 DNA-directed DNA polymerase

5.2e-24

87.32

Show/hide

Query:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        +  MLVTNAEQAILSK  A LRSDLP YMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAE FSADPI+RR
Subjt:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

A0A6J1HVF9 DNA-directed DNA polymerase

5.2e-24

87.32

Show/hide

Query:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        +  MLVTNAEQAILSK  A LRSDLP YMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAE FSADPI+RR
Subjt:  LETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G52050.1 5'-3' exonuclease family protein

6.9e-21

67.12

Show/hide

Query:  GVLETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        G ++  L+ +A+QAILSK  A LRSDLP Y+VPF T+DL FKKPEDNGEK +SLL AI  YAE FSADP+IRR
Subjt:  GVLETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

AT3G52050.2 5'-3' exonuclease family protein

6.9e-21

67.12

Show/hide

Query:  GVLETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        G ++  L+ +A+QAILSK  A LRSDLP Y+VPF T+DL FKKPEDNGEK +SLL AI  YAE FSADP+IRR
Subjt:  GVLETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

AT3G52050.3 5'-3' exonuclease family protein

6.9e-21

67.12

Show/hide

Query:  GVLETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        G ++  L+ +A+QAILSK  A LRSDLP Y+VPF T+DL FKKPEDNGEK +SLL AI  YAE FSADP+IRR
Subjt:  GVLETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

AT3G52050.4 5'-3' exonuclease family protein

6.9e-21

67.12

Show/hide

Query:  GVLETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR
        G ++  L+ +A+QAILSK  A LRSDLP Y+VPF T+DL FKKPEDNGEK +SLL AI  YAE FSADP+IRR
Subjt:  GVLETMLVTNAEQAILSKLQATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGGATGGAAAATTGAGTCATTTTGAAGAAGAATCAACATTTGCTGACCTGATTAAAGCTGTACACTTCCAGAAGGTCCGGGTTATTGGCAAAAACAGAGTGCTTGC
TGAGGTGGTTCCGAAGAGAGTCCAAAGAGGGATTTTCAAGGGCAGTCCACACATTGTTGAAGGAAGTTTGTTTGCGGATATAATGCTTAAGAATTTTTGGAACATGAGAG
GCTTTGCTACCTTTGGTGTTCTTGAAACGATGTTGGTAACAAATGCTGAACAAGCTATCTTGAGCAAGCTGCAGGCAACCTTGCGATCTGATCTTCCATTCTATATGGTA
CCATTTACCACCAGAGACCTTTTATTCAAGAAACCGGAGGATAATGGGGAGAAATTCACAAGCCTCTTAACTGCTATTGGTGCATATGCAGAAAGATTCTCTGCTGATCC
AATCATTAGGAGAAGAGAAGCTAGAAGAAGGGACATTGTTGCCATCAAGTTGGTTACAGTCGTAGGATATAGATTGTTAATCTTGAGATATGTATTGTGTACACCTCTAG
TTGTAACTAGAAAGATTTTTGTTGTACCCATTGTTGATTATAGTAGAGATTTGGACTTAGCTTTTGGTTCATGGGTTTTTACTTTCCTTGGAGCGAAAATGATGGAAGTG
AAGAAGATGAAGAAGATGAAAGAAGATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVDGKLSHFEEESTFADLIKAVHFQKVRVIGKNRVLAEVVPKRVQRGIFKGSPHIVEGSLFADIMLKNFWNMRGFATFGVLETMLVTNAEQAILSKLQATLRSDLPFYMV
PFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRREARRRDIVAIKLVTVVGYRLLILRYVLCTPLVVTRKIFVVPIVDYSRDLDLAFGSWVFTFLGAKMMEV
KKMKKMKED

MELO3C033507 (gene) of Melon (DHL92) v4 genome