CuGenDBv2

Gene ID	MELO3C033598
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Glial fibrillary acidic protein-like
Genome location	chr11:10521872..10522277
RNA-Seq Expression	MELO3C033598
Synteny	MELO3C033598
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]

3.9e-58

88.89

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Query:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD
        IEVLQHSI+EYKSQLIE E+KN FLQKAVNSSE+QLLICRKA+EV+TDDYAQL+EKYQEMSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMAS+AD
Subjt:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD

Query:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG
        QFS+QARTLRQGVIPTRD + ELSHFLGIIGQ LG
Subjt:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]

9.3e-60

90.37

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Query:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD
        IEVLQHSI+EYKSQLIE E+KN FLQKAVNSSE+QLLICRKA+EV+TDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMA +AD
Subjt:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD

Query:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG
        QFS+QARTLRQGVIPTRDT++ELSHFLGIIGQ LG
Subjt:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG

KAA0034829.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]

1.4e-63

97.01

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Query:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD
        IEVLQ+SIKEYKSQLI+VENKNRFLQKAVNSSE+QLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMA MAD
Subjt:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD

Query:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYL
        QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYL
Subjt:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYL

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]

2.7e-59

89.63

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Query:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD
        IEVLQHSI+EYKSQLIE E+KN FLQKAVNSSE+QLLICRKA++V+TDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMA +AD
Subjt:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD

Query:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG
        QFS+QARTLRQGVIPTRDT++ELSHFLGIIGQ LG
Subjt:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG

TYK27025.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]

5.5e-60

90.37

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Query:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD
        IEVLQHSIKEYKSQL+EVE+KN+FLQKAVNSSE+QLLICRKA+EV+TDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMA +AD
Subjt:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD

Query:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG
        QF +QARTLRQGVIPTRDT++ELSHFLGIIGQ LG
Subjt:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SM49 Glial fibrillary acidic protein-like

1.9e-58

88.89

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Query:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD
        IEVLQHSI+EYKSQLIE E+KN FLQKAVNSSE+QLLICRKA+EV+TDDYAQL+EKYQEMSIDFMMWKDEYETLRRKYDDAI RMERGAEKLRQMAS+AD
Subjt:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD

Query:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG
        QFS+QARTLRQGVIPTRD + ELSHFLGIIGQ LG
Subjt:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG

A0A5A7SUT0 Reverse transcriptase

4.5e-60

90.37

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Query:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD
        IEVLQHSI+EYKSQLIE E+KN FLQKAVNSSE+QLLICRKA+EV+TDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMA +AD
Subjt:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD

Query:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG
        QFS+QARTLRQGVIPTRDT++ELSHFLGIIGQ LG
Subjt:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG

A0A5A7T0F3 Glial fibrillary acidic protein-like

6.7e-64

97.01

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Query:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD
        IEVLQ+SIKEYKSQLI+VENKNRFLQKAVNSSE+QLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMA MAD
Subjt:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD

Query:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYL
        QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYL
Subjt:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYL

A0A5A7TXA1 Glial fibrillary acidic protein-like

1.3e-59

89.63

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Query:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD
        IEVLQHSI+EYKSQLIE E+KN FLQKAVNSSE+QLLICRKA++V+TDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMA +AD
Subjt:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD

Query:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG
        QFS+QARTLRQGVIPTRDT++ELSHFLGIIGQ LG
Subjt:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG

A0A5D3DUN1 Glial fibrillary acidic protein-like

2.6e-60

90.37

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Query:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD
        IEVLQHSIKEYKSQL+EVE+KN+FLQKAVNSSE+QLLICRKA+EV+TDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMA +AD
Subjt:  IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMAD

Query:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG
        QF +QARTLRQGVIPTRDT++ELSHFLGIIGQ LG
Subjt:  QFSMQARTLRQGVIPTRDTNRELSHFLGIIGQYLG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATTGAGGTTCTACAACATTCGATTAAAGAATACAAATCCCAACTTATAGAAGTGGAAAACAAAAATAGATTTTTGCAAAAAGCCGTTAACAGTTCTGAAAACCAG
TTGCTGATATGTCGCAAAGCAAAGGAAGTCTTAACAGATGACTATGCTCAATTAATAGAAAAATATCAAGAAATGTCGATAGATTTCATGATGTGGAAGGACGAG
TACGAGACATTGAGACGTAAGTATGATGATGCTATAGGTCGAATGGAACGAGGGGCTGAAAAATTAAGACAAATGGCGAGTATGGCAGATCAATTCTCAATGCAA
GCTAGGACTCTCCGGCAAGGTGTTATACCTACACGCGACACCAATAGAGAATTGTCTCATTTTCTAGGAATCATAGGACAGTACCTCGGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

IEVLQHSIKEYKSQLIEVENKNRFLQKAVNSSENQLLICRKAKEVLTDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRMERGAEKLRQMASMADQFSMQ
ARTLRQGVIPTRDTNRELSHFLGIIGQYLG

MELO3C033598 (gene) of Melon (DHL92) v4 genome