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MELO3C033681 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033681
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr01:22575187..22575430
RNA-Seq ExpressionMELO3C033681
SyntenyMELO3C033681
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033241.1 hypothetical protein E6C27_scaffold845G00350 [Cucumis melo var. makuwa]1.3e-1267.14Show/hide
Query:  MFSC--DFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAGWAPLRQRRWECRAGPTTS
        MF C     ++SIDYMTEILSLRL  TV T  + SL TL+VLRDNDA+VSAG  PLRQR+WEC A PTTS
Subjt:  MFSC--DFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAGWAPLRQRRWECRAGPTTS
TYK00848.1 gag/pol protein [Cucumis melo var. makuwa]5.6e-1391.49Show/hide
Query:  MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVV
        MFSCDF ELSI YMTEILSLRLYG VCTQVIFSLSTLSVL DNDAVV
Subjt:  MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVV
TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]5.3e-1186.96Show/hide
Query:  DFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAG
        D  E+SIDYMTEILSLRLYGTVC QVIF LSTLSVLRDNDAVVS G
Subjt:  DFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAG
TYK11693.1 gag protease polyprotein [Cucumis melo var. makuwa]1.9e-1391.49Show/hide
Query:  MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVV
        MFSCDF ELSIDY+TEILSLRLYGTVCTQVIF LSTLSVL DNDAVV
Subjt:  MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVV
TYK27262.1 hypothetical protein E5676_scaffold244G00290 [Cucumis melo var. makuwa]3.1e-1986.67Show/hide
Query:  LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAGWAPLRQRRWECRAGPTTS
        +S DYMTEILSL LYGTVCTQVIFSLSTLSVLR+NDA VSAG  PLRQRRWECR GPTTS
Subjt:  LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAGWAPLRQRRWECRAGPTTS
TrEMBL top hitse value%identityAlignment
A0A5A7SUV2 Uncharacterized protein6.1e-1367.14Show/hide
Query:  MFSC--DFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAGWAPLRQRRWECRAGPTTS
        MF C     ++SIDYMTEILSLRL  TV T  + SL TL+VLRDNDA+VSAG  PLRQR+WEC A PTTS
Subjt:  MFSC--DFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAGWAPLRQRRWECRAGPTTS
A0A5D3BP54 Gag/pol protein2.7e-1391.49Show/hide
Query:  MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVV
        MFSCDF ELSI YMTEILSLRLYG VCTQVIFSLSTLSVL DNDAVV
Subjt:  MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVV
A0A5D3CAC6 Uncharacterized protein2.5e-1186.96Show/hide
Query:  DFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAG
        D  E+SIDYMTEILSLRLYGTVC QVIF LSTLSVLRDNDAVVS G
Subjt:  DFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAG
A0A5D3CIF4 Gag protease polyprotein9.4e-1491.49Show/hide
Query:  MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVV
        MFSCDF ELSIDY+TEILSLRLYGTVCTQVIF LSTLSVL DNDAVV
Subjt:  MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVV
A0A5D3DUS7 Uncharacterized protein1.5e-1986.67Show/hide
Query:  LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAGWAPLRQRRWECRAGPTTS
        +S DYMTEILSL LYGTVCTQVIFSLSTLSVLR+NDA VSAG  PLRQRRWECR GPTTS
Subjt:  LSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAGWAPLRQRRWECRAGPTTS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCATGTGACTTCACGGAGCTTTCCATTGATTACATGACTGAGATATTGAGCCTGAGGCTATATGGTACCGTGTGCACACAGGTTATATTTTCGTTGTCGACGTT
GAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGTGGGCCCCACTACGACAAAGACGATGGGAGTGCCGGGCGGGCCCCACTACATCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTCATGTGACTTCACGGAGCTTTCCATTGATTACATGACTGAGATATTGAGCCTGAGGCTATATGGTACCGTGTGCACACAGGTTATATTTTCGTTGTCGACGTT
GAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGTGGGCCCCACTACGACAAAGACGATGGGAGTGCCGGGCGGGCCCCACTACATCGTAG
Protein sequenceShow/hide protein sequence
MFSCDFTELSIDYMTEILSLRLYGTVCTQVIFSLSTLSVLRDNDAVVSAGWAPLRQRRWECRAGPTTS