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MELO3C033687 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033687
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr09:4217744..4217974
RNA-Seq ExpressionMELO3C033687
SyntenyMELO3C033687
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046934.1 uncharacterized protein E6C27_scaffold230G001030 [Cucumis melo var. makuwa]1.5e-1463.1Show/hide
Query:  FHSQSSFLFDHIDDSLPCPPKFLPSSAT----ETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSN
        F  ++ FLF HIDDSLPCP KFL S A     ETNL YLQWLS DQALITLINATLS SALAHV           +L+KR+SSN
Subjt:  FHSQSSFLFDHIDDSLPCPPKFLPSSAT----ETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSN

KAA0048199.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.7e-1468.66Show/hide
Query:  LFDHIDDSLPCPPKFLPSSATETNL----GYLQWLSRDQALITLINATLSPSALAHVALEKRHSSNT
        LF HIDD+LPCPPK LPSS   TN     GYLQWLSRDQALITLINATLS SAL HV     H   T
Subjt:  LFDHIDDSLPCPPKFLPSSATETNL----GYLQWLSRDQALITLINATLSPSALAHVALEKRHSSNT

KAA0061282.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.5e-1465.38Show/hide
Query:  LFDHIDDSLPCPPKFLPSSA----TETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSNT
        LF HIDD+LPCPPK LPSS     +E N  YLQWLSRDQALITLIN TLS SALAHV           +LEKR+SSNT
Subjt:  LFDHIDDSLPCPPKFLPSSA----TETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSNT

TYK03217.1 uncharacterized protein E5676_scaffold298G00290 [Cucumis melo var. makuwa]1.5e-1463.1Show/hide
Query:  FHSQSSFLFDHIDDSLPCPPKFLPSSAT----ETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSN
        F  ++ FLF HIDDSLPCP KFL S A     ETNL YLQWLS DQALITLINATLS SALAHV           +L+KR+SSN
Subjt:  FHSQSSFLFDHIDDSLPCPPKFLPSSAT----ETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSN

TYK08059.1 retrotransposon protein [Cucumis melo var. makuwa]5.7e-1468.66Show/hide
Query:  LFDHIDDSLPCPPKFLPSSATETNL----GYLQWLSRDQALITLINATLSPSALAHVALEKRHSSNT
        LF HIDD+LPCPPK LPSS   TN     GYLQWLSRDQALITLINATLS SAL HV     H   T
Subjt:  LFDHIDDSLPCPPKFLPSSATETNL----GYLQWLSRDQALITLINATLSPSALAHVALEKRHSSNT

TrEMBL top hitse value%identityAlignment
A0A5A7TVE6 Integrase catalytic domain-containing protein7.2e-1563.1Show/hide
Query:  FHSQSSFLFDHIDDSLPCPPKFLPSSAT----ETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSN
        F  ++ FLF HIDDSLPCP KFL S A     ETNL YLQWLS DQALITLINATLS SALAHV           +L+KR+SSN
Subjt:  FHSQSSFLFDHIDDSLPCPPKFLPSSAT----ETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSN

A0A5A7U426 Putative mitochondrial protein2.8e-1468.66Show/hide
Query:  LFDHIDDSLPCPPKFLPSSATETNL----GYLQWLSRDQALITLINATLSPSALAHVALEKRHSSNT
        LF HIDD+LPCPPK LPSS   TN     GYLQWLSRDQALITLINATLS SAL HV     H   T
Subjt:  LFDHIDDSLPCPPKFLPSSATETNL----GYLQWLSRDQALITLINATLSPSALAHVALEKRHSSNT

A0A5A7UZE5 Putative mitochondrial protein7.2e-1565.38Show/hide
Query:  LFDHIDDSLPCPPKFLPSSA----TETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSNT
        LF HIDD+LPCPPK LPSS     +E N  YLQWLSRDQALITLIN TLS SALAHV           +LEKR+SSNT
Subjt:  LFDHIDDSLPCPPKFLPSSA----TETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSNT

A0A5D3BUR4 Integrase catalytic domain-containing protein7.2e-1563.1Show/hide
Query:  FHSQSSFLFDHIDDSLPCPPKFLPSSAT----ETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSN
        F  ++ FLF HIDDSLPCP KFL S A     ETNL YLQWLS DQALITLINATLS SALAHV           +L+KR+SSN
Subjt:  FHSQSSFLFDHIDDSLPCPPKFLPSSAT----ETNLGYLQWLSRDQALITLINATLSPSALAHV-----------ALEKRHSSN

A0A5D3CCL2 Retrotransposon protein2.8e-1468.66Show/hide
Query:  LFDHIDDSLPCPPKFLPSSATETNL----GYLQWLSRDQALITLINATLSPSALAHVALEKRHSSNT
        LF HIDD+LPCPPK LPSS   TN     GYLQWLSRDQALITLINATLS SAL HV     H   T
Subjt:  LFDHIDDSLPCPPKFLPSSATETNL----GYLQWLSRDQALITLINATLSPSALAHVALEKRHSSNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATACCAAGTTTCTTCCATTCTCAAAGCTCATTCCTTTTTGACCACATTGACGATTCCCTTCCGTGTCCTCCCAAATTCTTACCTTCATCGGCTACTGAAACCAA
TCTAGGATATCTTCAATGGCTCTCCCGTGACCAAGCCCTCATCACTCTTATCAACGCCACCTTATCACCCTCTGCTCTTGCTCATGTCGCTCTAGAAAAGAGACATTCTT
CCAATACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATACCAAGTTTCTTCCATTCTCAAAGCTCATTCCTTTTTGACCACATTGACGATTCCCTTCCGTGTCCTCCCAAATTCTTACCTTCATCGGCTACTGAAACCAA
TCTAGGATATCTTCAATGGCTCTCCCGTGACCAAGCCCTCATCACTCTTATCAACGCCACCTTATCACCCTCTGCTCTTGCTCATGTCGCTCTAGAAAAGAGACATTCTT
CCAATACCTGA
Protein sequenceShow/hide protein sequence
MEIPSFFHSQSSFLFDHIDDSLPCPPKFLPSSATETNLGYLQWLSRDQALITLINATLSPSALAHVALEKRHSSNT