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MELO3C033720 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033720
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionU4/U6 small nuclear ribonucleoprotein Prp3
Genome locationchr06:15373966..15374145
RNA-Seq ExpressionMELO3C033720
SyntenyMELO3C033720
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025992.1 U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo var. makuwa]3.8e-2198.28Show/hide
Query:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
        GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDV DGKVQFGGTTDEKRSLGN
Subjt:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
KAA0039470.1 70-Kd heat shock protein [Cucumis melo var. makuwa]6.5e-2198.25Show/hide
Query:  RARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
        RARRDRKRFE+RVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
Subjt:  RARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
KAA0047368.1 U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo var. makuwa]4.5e-22100Show/hide
Query:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
        GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
Subjt:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
TYK00660.1 U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo var. makuwa]1.7e-2198.28Show/hide
Query:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
        GRARRDRKRFE+RVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
Subjt:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
XP_008461606.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo]4.5e-22100Show/hide
Query:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
        GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
Subjt:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
TrEMBL top hitse value%identityAlignment
A0A1S3CF39 U4/U6 small nuclear ribonucleoprotein Prp32.2e-22100Show/hide
Query:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
        GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
Subjt:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
A0A5A7SLH4 U4/U6 small nuclear ribonucleoprotein Prp31.8e-2198.28Show/hide
Query:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
        GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDV DGKVQFGGTTDEKRSLGN
Subjt:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
A0A5A7SXX5 U4/U6 small nuclear ribonucleoprotein Prp32.2e-22100Show/hide
Query:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
        GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
Subjt:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
A0A5A7TWT4 U4/U6 small nuclear ribonucleoprotein Prp32.2e-22100Show/hide
Query:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
        GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
Subjt:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
A0A5D3BNR8 U4/U6 small nuclear ribonucleoprotein Prp38.2e-2298.28Show/hide
Query:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
        GRARRDRKRFE+RVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
Subjt:  GRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGACGGTAGGGCAAGGAGGGACCGGAAGCGGTTTGAGGATCGAGTGAAGGAAGAAGATAATGGTGGAAATGTTGATGAGAAGCATGCGAAAGTGATTGAATATAAGTC
CAAAGGAGACGTGGGGGATGGAAAAGTTCAGTTTGGAGGCACCACTGATGAAAAAAGGTCACTGGGGAAT
mRNA sequenceShow/hide mRNA sequence
TTTGACGGTAGGGCAAGGAGGGACCGGAAGCGGTTTGAGGATCGAGTGAAGGAAGAAGATAATGGTGGAAATGTTGATGAGAAGCATGCGAAAGTGATTGAATATAAGTC
CAAAGGAGACGTGGGGGATGGAAAAGTTCAGTTTGGAGGCACCACTGATGAAAAAAGGTCACTGGGGAAT
Protein sequenceShow/hide protein sequence
FDGRARRDRKRFEDRVKEEDNGGNVDEKHAKVIEYKSKGDVGDGKVQFGGTTDEKRSLGN