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MELO3C033850 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033850
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Genome locationchr08:7967010..7968242
RNA-Seq ExpressionMELO3C033850
SyntenyMELO3C033850
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025195.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.0e-1259.55Show/hide
Query:  VAFFVLNLFLFGMAILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG
        VAFFV+NL LF M         S G                       AIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG
Subjt:  VAFFVLNLFLFGMAILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG

KAA0033533.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.1e-2379.38Show/hide
Query:  VMVAFFVLNLFLFGMAIL-LCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNT-GSSSQ
        VMVAFFVLNLF+FGMAIL LC     YGSL  LILA+CSYLLIECLFSMSTAIMSSSYPR NFM+TDA FLEFE+DLDNI GG  S+GD+T GSSSQ
Subjt:  VMVAFFVLNLFLFGMAIL-LCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNT-GSSSQ

KAA0054221.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.3e-1241.01Show/hide
Query:  VMVAFFVLNLFLFGMAIL---LCWLSCSYGSLYIL-----------------------------------------------------------------
        VMVAFFVLNLFLFGMAIL   LCWLS SYGSL  L                                                                 
Subjt:  VMVAFFVLNLFLFGMAIL---LCWLSCSYGSLYIL-----------------------------------------------------------------

Query:  ------ILAICSYLLIEC---------LFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTGSSSQ
              I      L +E           +   TAIMSSSYPRNNFMETDA FLEFE+DLDNI G SLS+GDNTGSSSQ
Subjt:  ------ILAICSYLLIEC---------LFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTGSSSQ

KAA0058217.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.1e-1874.67Show/hide
Query:  AILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNT
        ++ LC +   YGSL  LILA+CSYLLIECLFSMST IMSSSYPRNNF+ETDA FLEFE+DLDNI GGS  +GDNT
Subjt:  AILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNT

TYK07471.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.0e-1259.55Show/hide
Query:  VAFFVLNLFLFGMAILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG
        VAFFV+NL LF M         S G                       AIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG
Subjt:  VAFFVLNLFLFGMAILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG

TrEMBL top hitse value%identityAlignment
A0A5A7SL49 CACTA en-spm transposon protein9.5e-1359.55Show/hide
Query:  VAFFVLNLFLFGMAILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG
        VAFFV+NL LF M         S G                       AIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG
Subjt:  VAFFVLNLFLFGMAILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG

A0A5A7SSV3 CACTA en-spm transposon protein5.3e-2479.38Show/hide
Query:  VMVAFFVLNLFLFGMAIL-LCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNT-GSSSQ
        VMVAFFVLNLF+FGMAIL LC     YGSL  LILA+CSYLLIECLFSMSTAIMSSSYPR NFM+TDA FLEFE+DLDNI GG  S+GD+T GSSSQ
Subjt:  VMVAFFVLNLFLFGMAIL-LCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNT-GSSSQ

A0A5A7UL05 CACTA en-spm transposon protein2.1e-1241.01Show/hide
Query:  VMVAFFVLNLFLFGMAIL---LCWLSCSYGSLYIL-----------------------------------------------------------------
        VMVAFFVLNLFLFGMAIL   LCWLS SYGSL  L                                                                 
Subjt:  VMVAFFVLNLFLFGMAIL---LCWLSCSYGSLYIL-----------------------------------------------------------------

Query:  ------ILAICSYLLIEC---------LFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTGSSSQ
              I      L +E           +   TAIMSSSYPRNNFMETDA FLEFE+DLDNI G SLS+GDNTGSSSQ
Subjt:  ------ILAICSYLLIEC---------LFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTGSSSQ

A0A5A7UU01 CACTA en-spm transposon protein2.0e-1874.67Show/hide
Query:  AILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNT
        ++ LC +   YGSL  LILA+CSYLLIECLFSMST IMSSSYPRNNF+ETDA FLEFE+DLDNI GGS  +GDNT
Subjt:  AILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNT

A0A5D3C6F4 CACTA en-spm transposon protein9.5e-1359.55Show/hide
Query:  VAFFVLNLFLFGMAILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG
        VAFFV+NL LF M         S G                       AIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG
Subjt:  VAFFVLNLFLFGMAILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGTTAAGATTTGTTTTGGCTATCCTGCAGTTATGGTAGCCTTTTTTGTTTTGAATTTGTTTCTGTTTGGGATGGCTATCTTGTTGTGTTGGCTATCCTGC
AGTTATGGTAGCCTCTATATTTTGATTCTAGCTATTTGTTCGTATTTGCTTATTGAATGTTTGTTTTCTATGTCCACAGCCATTATGTCATCGTCATATCCACGT
AATAATTTTATGGAGACGGACGCTAAGTTCCTCGAGTTTGAGAACGATTTAGATAACATCGTGGGAGGGTCGTTGTCTATGGGCGACAATACGGGGTCTTCTTCT
CAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGTTAAGATTTGTTTTGGCTATCCTGCAGTTATGGTAGCCTTTTTTGTTTTGAATTTGTTTCTGTTTGGGATGGCTATCTTGTTGTGTTGGCTATCCTGC
AGTTATGGTAGCCTCTATATTTTGATTCTAGCTATTTGTTCGTATTTGCTTATTGAATGTTTGTTTTCTATGTCCACAGCCATTATGTCATCGTCATATCCACGT
AATAATTTTATGGAGACGGACGCTAAGTTCCTCGAGTTTGAGAACGATTTAGATAACATCGTGGGAGGGTCGTTGTCTATGGGCGACAATACGGGGTCTTCTTCT
CAATAACCTGTGACTTCGACTCCTAGGAGACATGCGTAGTCTCGA
Protein sequenceShow/hide protein sequence
MCVKICFGYPAVMVAFFVLNLFLFGMAILLCWLSCSYGSLYILILAICSYLLIECLFSMSTAIMSSSYPRNNFMETDAKFLEFENDLDNIVGGSLSMGDNTGSSS
Q