; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C033889 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C033889
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionProtein farnesyltransferase subunit beta-like
Genome locationchr09:12197206..12200051
RNA-Seq ExpressionMELO3C033889
SyntenyMELO3C033889
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0018343 - protein farnesylation (biological process)
GO:0005965 - protein farnesyltransferase complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004660 - protein farnesyltransferase activity (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR003653 - Ulp1 protease family, C-terminal catalytic domain
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR026872 - Protein farnesyltransferase subunit beta
IPR038765 - Papain-like cysteine peptidase superfamily
IPR045089 - Prenyltransferase subunit beta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063720.1 uncharacterized protein E6C27_scaffold1290G00010 [Cucumis melo var. makuwa]8.7e-3087.01Show/hide
Query:  TVYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV
        +VYAL+SLRHGSVRD+LKSMVNT LRMFY E NTRARP TWVS+KCAQQPGS ECGYYVMKFMQDIVRQKSI ITDV
Subjt:  TVYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV

KAA0065291.1 protein farnesyltransferase subunit beta-like [Cucumis melo var. makuwa]1.7e-3348.69Show/hide
Query:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQFNLMLEKALLLMIYQLMSSVTHLVLQIAKHKFGTIQFQKYFFAPSIN
        TFCGLATLIL+NEVH+LDL+S LDWVVFRQ GLECGFQGRTNKLVDGCYSF QFNLMLEKALLLMIYQL                               
Subjt:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQFNLMLEKALLLMIYQLMSSVTHLVLQIAKHKFGTIQFQKYFFAPSIN

Query:  CSSKQRLDISLRANTVYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV
                                                                   CAQQPGS EC YYVMKFMQDIVRQKSITITDV
Subjt:  CSSKQRLDISLRANTVYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV

KAA0067725.1 uncharacterized protein E6C27_scaffold352G00380 [Cucumis melo var. makuwa]1.9e-3277.55Show/hide
Query:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDVNFLYCLRSISFLDGKNTSKSSF
        VYAL+SLRHGSVRD+LKSMVNTGLRMFYAE NTRARPLTWVS KCAQQPGS ECGYYVMKFMQDIVRQKSITITDV F +     S L G    K  +
Subjt:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDVNFLYCLRSISFLDGKNTSKSSF

TYJ97416.1 uncharacterized protein E5676_scaffold194G002410 [Cucumis melo var. makuwa]8.7e-3089.47Show/hide
Query:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV
        VYAL+SLRHGSVRD+LKSMVNTGLRMFY E NTRARPLTWVS KCAQQPGS E GYY+MKFMQDIVRQKSITITDV
Subjt:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV

TYK02315.1 uncharacterized protein E5676_scaffold66768G00010 [Cucumis melo var. makuwa]6.0e-3192.11Show/hide
Query:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV
        +YAL+SLRHGSVRD+LKSMVNTGLRMFYAEINTRAR LTWV VKCAQQPGS ECGYYVMKFMQDIVRQKSITITDV
Subjt:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV

TrEMBL top hitse value%identityAlignment
A0A5A7V954 ULP_PROTEASE domain-containing protein4.2e-3087.01Show/hide
Query:  TVYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV
        +VYAL+SLRHGSVRD+LKSMVNT LRMFY E NTRARP TWVS+KCAQQPGS ECGYYVMKFMQDIVRQKSI ITDV
Subjt:  TVYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV

A0A5A7VHS3 CAAX farnesyltransferase subunit beta8.2e-3448.69Show/hide
Query:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQFNLMLEKALLLMIYQLMSSVTHLVLQIAKHKFGTIQFQKYFFAPSIN
        TFCGLATLIL+NEVH+LDL+S LDWVVFRQ GLECGFQGRTNKLVDGCYSF QFNLMLEKALLLMIYQL                               
Subjt:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQFNLMLEKALLLMIYQLMSSVTHLVLQIAKHKFGTIQFQKYFFAPSIN

Query:  CSSKQRLDISLRANTVYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV
                                                                   CAQQPGS EC YYVMKFMQDIVRQKSITITDV
Subjt:  CSSKQRLDISLRANTVYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV

A0A5A7VPW2 DUF4218 domain-containing protein9.1e-3377.55Show/hide
Query:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDVNFLYCLRSISFLDGKNTSKSSF
        VYAL+SLRHGSVRD+LKSMVNTGLRMFYAE NTRARPLTWVS KCAQQPGS ECGYYVMKFMQDIVRQKSITITDV F +     S L G    K  +
Subjt:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDVNFLYCLRSISFLDGKNTSKSSF

A0A5D3BEF8 Uncharacterized protein4.2e-3089.47Show/hide
Query:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV
        VYAL+SLRHGSVRD+LKSMVNTGLRMFY E NTRARPLTWVS KCAQQPGS E GYY+MKFMQDIVRQKSITITDV
Subjt:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV

A0A5D3BT18 ULP_PROTEASE domain-containing protein2.9e-3192.11Show/hide
Query:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV
        +YAL+SLRHGSVRD+LKSMVNTGLRMFYAEINTRAR LTWV VKCAQQPGS ECGYYVMKFMQDIVRQKSITITDV
Subjt:  VYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDV

SwissProt top hitse value%identityAlignment
P49355 Protein farnesyltransferase subunit beta6.9e-1459.38Show/hide
Query:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQFNL--MLEKAL
        TFCGLA L+++ +   L+L+SLL WV  RQ   E GFQGR NKLVDGCYSFWQ  L  +L +AL
Subjt:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQFNL--MLEKAL

Q02293 Protein farnesyltransferase subunit beta6.9e-1459.38Show/hide
Query:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQFNL--MLEKAL
        TFCGLA L+++ +   L+L+SLL WV  RQ   E GFQGR NKLVDGCYSFWQ  L  +L +AL
Subjt:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQFNL--MLEKAL

Q04903 Protein farnesyltransferase subunit beta1.2e-1881.13Show/hide
Query:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        TFCGLA +IL+ EV++LDL  LLDWVVFRQ G ECGFQGRTNKLVDGCYSFWQ
Subjt:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

Q38920 Protein farnesyltransferase subunit beta1.3e-1569.81Show/hide
Query:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        T+CGLA +IL+NEV +L+L SL++W V RQ G+E GFQGRTNKLVDGCY+FWQ
Subjt:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ

Q8K2I1 Protein farnesyltransferase subunit beta6.9e-1459.38Show/hide
Query:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQFNL--MLEKAL
        TFCGLA L+++ +   L+L+SLL WV  RQ   E GFQGR NKLVDGCYSFWQ  L  +L +AL
Subjt:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQFNL--MLEKAL

Arabidopsis top hitse value%identityAlignment
AT2G39550.1 Prenyltransferase family protein6.0e-0539.68Show/hide
Query:  TFCGLATLILVNEV-----------HQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFW
        T+C +A+L L+  +             +D   LL+W + RQA  + GFQGRTNK  D CY+FW
Subjt:  TFCGLATLILVNEV-----------HQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFW

AT5G40280.1 Prenyltransferase family protein9.0e-1769.81Show/hide
Query:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ
        T+CGLA +IL+NEV +L+L SL++W V RQ G+E GFQGRTNKLVDGCY+FWQ
Subjt:  TFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTATACCAATTTTTGAATGCTCAACACTATGAATATCTTTTCATGTGTACCTTTTGTGGTTTGGCTACTTTGATTCTGGTCAATGAGGTTCACCAGTTG
GACTTGCAGAGTTTACTTGACTGGGTGGTGTTTCGTCAAGCTGGTTTAGAGTGTGGATTTCAGGGAAGAACAAATAAGTTGGTTGATGGATGCTATTCGTTTTGG
CAGTTCAACCTTATGCTTGAGAAGGCTCTTCTTTTGATGATCTATCAACTGATGTCTTCTGTAACTCATTTGGTCCTTCAAATAGCAAAGCACAAATTTGGAACT
ATACAATTCCAAAAATACTTTTTTGCTCCAAGCATAAATTGCTCTAGTAAACAAAGATTAGACATCTCATTACGGGCAAATACGGTGTATGCACTCAATTCGTTA
AGACATGGTAGTGTTCGAGACAAATTGAAATCTATGGTCAACACAGGCTTAAGAATGTTTTATGCTGAAATAAACACAAGAGCTCGACCTCTTACTTGGGTTTCT
GTTAAGTGTGCTCAACAGCCGGGCAGTGCAGAATGTGGGTATTACGTGATGAAGTTCATGCAAGACATAGTAAGGCAAAAGAGCATTACAATTACAGATGTGAAT
TTTTTATATTGTTTGAGGTCGATCAGTTTCCTTGATGGGAAAAACACATCAAAGTCTTCTTTCTTGATGGCCAATACCATTGCAAAAAACATCGAAGTTCCCTTT
CTTGATGGCCAATACCATCAAGAAAGAACTTTTGATGACATGTTTTAA
mRNA sequenceShow/hide mRNA sequence
AGCGGGATGGGAAAACCGAGTTACAGTTTCAAAATTTCATTACCAACTGTTGAACCAATGAACAATTTCCCTCACTGGCATTCTGAGGAACTTATGTGTGTCGGA
GTAGTGACGATAGAGTTTTGGCGTGAAGATGAGATTCTTTCAAAGCTTCACCATCCAAATGTGGTGGCCTTTTATGATGTGGTGCAGGATGGACCGGGTGGGACA
TCGGCTACGTGTTCATTTGAAGGTGGTATTGCGGGAGAACCTGGATCCGAGGCTCATGGTGGGTATATAATTTGAAGGTTCACAATATCATGGAAGTATACCAAT
TTTTGAATGCTCAACACTATGAATATCTTTTCATGTGTACCTTTTGTGGTTTGGCTACTTTGATTCTGGTCAATGAGGTTCACCAGTTGGACTTGCAGAGTTTAC
TTGACTGGGTGGTGTTTCGTCAAGCTGGTTTAGAGTGTGGATTTCAGGGAAGAACAAATAAGTTGGTTGATGGATGCTATTCGTTTTGGCAGTTCAACCTTATGC
TTGAGAAGGCTCTTCTTTTGATGATCTATCAACTGATGTCTTCTGTAACTCATTTGGTCCTTCAAATAGCAAAGCACAAATTTGGAACTATACAATTCCAAAAAT
ACTTTTTTGCTCCAAGCATAAATTGCTCTAGTAAACAAAGATTAGACATCTCATTACGGGCAAATACGGTGTATGCACTCAATTCGTTAAGACATGGTAGTGTTC
GAGACAAATTGAAATCTATGGTCAACACAGGCTTAAGAATGTTTTATGCTGAAATAAACACAAGAGCTCGACCTCTTACTTGGGTTTCTGTTAAGTGTGCTCAAC
AGCCGGGCAGTGCAGAATGTGGGTATTACGTGATGAAGTTCATGCAAGACATAGTAAGGCAAAAGAGCATTACAATTACAGATGTGAATTTTTTATATTGTTTGA
GGTCGATCAGTTTCCTTGATGGGAAAAACACATCAAAGTCTTCTTTCTTGATGGCCAATACCATTGCAAAAAACATCGAAGTTCCCTTTCTTGATGGCCAATACC
ATCAAGAAAGAACTTTTGATGACATGTTTTAA
Protein sequenceShow/hide protein sequence
MEVYQFLNAQHYEYLFMCTFCGLATLILVNEVHQLDLQSLLDWVVFRQAGLECGFQGRTNKLVDGCYSFWQFNLMLEKALLLMIYQLMSSVTHLVLQIAKHKFGT
IQFQKYFFAPSINCSSKQRLDISLRANTVYALNSLRHGSVRDKLKSMVNTGLRMFYAEINTRARPLTWVSVKCAQQPGSAECGYYVMKFMQDIVRQKSITITDVN
FLYCLRSISFLDGKNTSKSSFLMANTIAKNIEVPFLDGQYHQERTFDDMF