CuGenDBv2

Gene ID	MELO3C033897
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Dynamin GTPase
Genome location	chr09:12991244..12994585
RNA-Seq Expression	MELO3C033897
Synteny	MELO3C033897
Gene Ontology terms	GO:0005737 - cytoplasm (cellular component) GO:0005874 - microtubule (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

AAU04752.1 DRP [Cucumis melo]

5.8e-04

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Query:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG
        +L DCNI+EV +EEEPTPSKSSKDKKAN  DSGKG
Subjt:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG

XP_008459523.1 PREDICTED: LOW QUALITY PROTEIN: dynamin-2A-like [Cucumis melo]

5.8e-04

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Query:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG
        +L DCNI+EV +EEEPTPSKSSKDKKAN  DSGKG
Subjt:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG

XP_038889852.1 dynamin-2A-like isoform X1 [Benincasa hispida]

7.5e-04

77.14

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Query:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG
        +L DCNI+E+ +EEEPTPSKSSKDKKAN  DSGKG
Subjt:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG

XP_038889854.1 dynamin-2B-like isoform X2 [Benincasa hispida]

7.5e-04

77.14

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Query:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG
        +L DCNI+E+ +EEEPTPSKSSKDKKAN  DSGKG
Subjt:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CBL4 Dynamin GTPase

2.8e-04

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Query:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG
        +L DCNI+EV +EEEPTPSKSSKDKKAN  DSGKG
Subjt:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG

A0A5A7TBC1 Dynamin GTPase

8.1e-04

77.14

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Query:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG
        +L +CNI+EV +EEEPTPSKSSKDKKAN  DSGKG
Subjt:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG

A0A5D3BQY1 Dynamin GTPase

8.1e-04

77.14

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Query:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG
        +L +CNI+EV +EEEPTPSKSSKDKKAN  DSGKG
Subjt:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG

Q5DMX3 Dynamin GTPase

2.8e-04

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Query:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG
        +L DCNI+EV +EEEPTPSKSSKDKKAN  DSGKG
Subjt:  SLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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mRNA sequence

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ATGTCTACTCTTGAGTTAACCACTGGCATATGTTTCGAGCTTGGATTTAGTTGTATGGTGCGACAAGGTGGTAAGGCGATACGTGTAAAGTTGAATATTCTTCATTACTT
GCTATGTGTTCTAATGTGGGATACCCTTTGCTTGTTGTGTGATCTGACATTGAAAGATGCGATTCTTTCTGAGTCTGAGTTACGCATAACACCTTTTGTATTCTCTATAG
AAAACTATTGCTTTCTATCTGTTGATTCTGATGAATGTGTGCAAACCATTAGCCCCATTCCTATCAATATCCAACTAAAGTTGCATGAGCTCAATACATTCTTGAGATCT
ACGAAGAAGGGGTCCAAAGAAAACTTACAAAGTTACCCACCACCGTCGCTCCTGCCATACCACACAACGTCATCCTCGCCGCCTGCTCCATCTCTTCTAGTGTTGTCGCC
TTCATCTCTTTTAGATTGTAACATTGATGAAGTTGTAAACGAGGAAGAGCCTACACCTTCAAAGAGTTCAAAGGATAAAAAGGCTAATAGACTAGATTCTGGAAAAGGAT
AAAAGTCTTGTGTTTAATATTACCAGCAAAATTCCATATAAAACTATTTTAAAAGGTTCAAGCTAAATAAATATTTTGATATTTTAAATGTTGTATTCCTATGAAGAAGA
TATTTAAATGTTACACGTATTATTCTTTTCATAATAATATGACACTTAAATATCTGTTTTCAGGACTTGATTATTAGTATTGATGATACAATTTTGATGTTGATAATGAA
TGTTTAGTTAAGAACTCAAAACCATAAAAGAAAAAAAAAGTGAAAAAAGAAGGGAAAAAAGTGCATTTAAGTGAAAAAAATTCTTATTTTTATTTGTTGAAGGGTGAGAC
CTTAAGGGTTTTCCTACTTGGTTGCTTAGCAAAATGCTAGCTTTTAGGCTAAGATCCTCACATCCTGGTTACCTCCGATGGGTATGTGTTCTTTATTATAAGCTTATATG
TAAGTTGACTGACTCTAGGATAAATATTAAATTCAGGCAAATCAATCTTATATGTGTAATGTGACATTTTCTCATGTTATT

Protein sequence

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MSTLELTTGICFELGFSCMVRQGGKAIRVKLNILHYLLCVLMWDTLCLLCDLTLKDAILSESELRITPFVFSIENYCFLSVDSDECVQTISPIPINIQLKLHELNTFLRS
TKKGSKENLQSYPPPSLLPYHTTSSSPPAPSLLVLSPSSLLDCNIDEVVNEEEPTPSKSSKDKKANRLDSGKG

MELO3C033897 (gene) of Melon (DHL92) v4 genome