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MELO3C034080 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034080
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr09:5448377..5448684
RNA-Seq ExpressionMELO3C034080
SyntenyMELO3C034080
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038975.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-3074.51Show/hide
Query:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF
        +DVRASRPSRASEGR GSS  KRKRGSQR+ ELE IH+ L+ TN+QLR I +W A  L NDNHV  EFFRIL EM ELTS DRALLQRHLLSRMDD++GF
Subjt:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF

Query:  VL
        VL
Subjt:  VL
KAA0060654.1 retrotransposon protein [Cucumis melo var. makuwa]2.4e-3174Show/hide
Query:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF
        EDVRASR S  SEGRV SS+ KRKRGSQRE E+++IHMVLECTNDQL+ I +W AC L NDNHVH+EFF ILHEM ELT  DR+LLQRHLLS M DM+GF
Subjt:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF
KAA0066016.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-3896.59Show/hide
Query:  RVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGFVL
        RVGSSELKRKRG+QREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFF ILHEMSELTS DRALLQRHLLSRMDDMQGFVL
Subjt:  RVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGFVL
TYK05827.1 retrotransposon protein [Cucumis melo var. makuwa]3.4e-3895.45Show/hide
Query:  RVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGFVL
        RVGSSELKRK+G+QREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFF ILHEMSELTS DRALLQRHLLSRMDDMQGFVL
Subjt:  RVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGFVL
TYK29656.1 retrotransposon protein [Cucumis melo var. makuwa]9.0e-3172.55Show/hide
Query:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF
        +DV ASRPSRASEGR  SS  KRKRGSQRE ++E IH+ L+ TN+QL+ I +W ACAL+NDNHV  EFFRIL EM ELTS DRALLQRHLLSRMDD++GF
Subjt:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF

Query:  VL
        VL
Subjt:  VL
TrEMBL top hitse value%identityAlignment
A0A5A7V026 Retrotransposon protein1.1e-3174Show/hide
Query:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF
        EDVRASR S  SEGRV SS+ KRKRGSQRE E+++IHMVLECTNDQL+ I +W AC L NDNHVH+EFF ILHEM ELT  DR+LLQRHLLS M DM+GF
Subjt:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF
A0A5A7VI32 Retrotransposon protein7.4e-3996.59Show/hide
Query:  RVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGFVL
        RVGSSELKRKRG+QREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFF ILHEMSELTS DRALLQRHLLSRMDDMQGFVL
Subjt:  RVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGFVL
A0A5D3BT72 Retrotransposon protein5.7e-3174.51Show/hide
Query:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF
        +DVRASRPSR SEGR GSS  KRKRGSQR+ ELE IH+ L+ TNDQLR I +W A  L NDNHV  EFFRIL EM ELTS DRALLQRHLLSRMDD++GF
Subjt:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF

Query:  VL
        VL
Subjt:  VL
A0A5D3C1X3 Retrotransposon protein1.6e-3895.45Show/hide
Query:  RVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGFVL
        RVGSSELKRK+G+QREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFF ILHEMSELTS DRALLQRHLLSRMDDMQGFVL
Subjt:  RVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGFVL
A0A5D3E168 Retrotransposon protein4.3e-3172.55Show/hide
Query:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF
        +DV ASRPSRASEGR  SS  KRKRGSQRE ++E IH+ L+ TN+QL+ I +W ACAL+NDNHV  EFFRIL EM ELTS DRALLQRHLLSRMDD++GF
Subjt:  EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGF

Query:  VL
        VL
Subjt:  VL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGATGTACGCGCATCACGACCTTCTCGCGCGTCTGAGGGTAGGGTCGGATCGAGCGAATTGAAGAGGAAAAGGGGAAGCCAACGAGAGGCGGAGCTTGAAATC
ATACATATGGTACTGGAGTGTACGAACGACCAACTCAGGACGATTGTGGATTGGCTTGCATGCGCCCTTATTAATGACAACCATGTGCACCGGGAATTCTTTCGC
ATATTGCATGAGATGTCGGAACTAACGAGTTCGGATAGGGCGTTGTTGCAAAGGCACCTTTTGTCTCGTATGGACGACATGCAGGGTTTCGTACTG
mRNA sequenceShow/hide mRNA sequence
AGGAGGATGTACGCGCATCACGACCTTCTCGCGCGTCTGAGGGTAGGGTCGGATCGAGCGAATTGAAGAGGAAAAGGGGAAGCCAACGAGAGGCGGAGCTTGAAA
TCATACATATGGTACTGGAGTGTACGAACGACCAACTCAGGACGATTGTGGATTGGCTTGCATGCGCCCTTATTAATGACAACCATGTGCACCGGGAATTCTTTC
GCATATTGCATGAGATGTCGGAACTAACGAGTTCGGATAGGGCGTTGTTGCAAAGGCACCTTTTGTCTCGTATGGACGACATGCAGGGTTTCGTACTG
Protein sequenceShow/hide protein sequence
EDVRASRPSRASEGRVGSSELKRKRGSQREAELEIIHMVLECTNDQLRTIVDWLACALINDNHVHREFFRILHEMSELTSSDRALLQRHLLSRMDDMQGFVL