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MELO3C034111 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034111
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr10:18600287..18600981
RNA-Seq ExpressionMELO3C034111
SyntenyMELO3C034111
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.0e-3681.08Show/hide
Query:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE
        M ESLVPNIELKKYH DKEK LKRLRE+NC++A ENEKLREEVKKWVQ  VNTQRDLDE KRK LE EK NDSLNT+AIQVRKKNKRLLRNI +LHEE E
Subjt:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE

Query:  AKKIIVEVEVL
        AKK  +E+EVL
Subjt:  AKKIIVEVEVL

KAA0049672.1 uncharacterized protein E6C27_scaffold76G00070 [Cucumis melo var. makuwa]1.2e-2580.95Show/hide
Query:  INCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETEAKKIIVEVEVL
        +NC+LA ENEKLREEVKKWVQ  VNTQRDLDE KRK+LE EK NDSLNT+AIQVRKKNKRLLRNI DLHEE EAKK  +E+EVL
Subjt:  INCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETEAKKIIVEVEVL

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.0e-3681.08Show/hide
Query:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE
        M ESLVPNIELKKYH DKEK LKRLRE+NC++A ENEKLREEVKKWVQ  VNTQRDLDE KRK LE EK NDSLNT+AIQVRKKNKRLLRNI +LHEE E
Subjt:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE

Query:  AKKIIVEVEVL
        AKK  +E+EVL
Subjt:  AKKIIVEVEVL

TYK28968.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.8e-46100Show/hide
Query:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE
        MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE
Subjt:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE

Query:  AKKI
        AKKI
Subjt:  AKKI

XP_008464352.1 PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo]5.5e-3482.52Show/hide
Query:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE
        M ESLVPNIELKKYH D+EK LKRLRE+NC+LA ENEKLREEVKKWVQ  VNTQRDLDE KRK+LE EK NDSLNT+AIQVRKKNKRLLRNI +LHEE E
Subjt:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE

Query:  AKK
        A+K
Subjt:  AKK

TrEMBL top hitse value%identityAlignment
A0A1S3CLQ1 glial fibrillary acidic protein-like2.7e-3482.52Show/hide
Query:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE
        M ESLVPNIELKKYH D+EK LKRLRE+NC+LA ENEKLREEVKKWVQ  VNTQRDLDE KRK+LE EK NDSLNT+AIQVRKKNKRLLRNI +LHEE E
Subjt:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE

Query:  AKK
        A+K
Subjt:  AKK

A0A5A7SNY0 Glial fibrillary acidic protein-like9.8e-3781.08Show/hide
Query:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE
        M ESLVPNIELKKYH DKEK LKRLRE+NC++A ENEKLREEVKKWVQ  VNTQRDLDE KRK LE EK NDSLNT+AIQVRKKNKRLLRNI +LHEE E
Subjt:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE

Query:  AKKIIVEVEVL
        AKK  +E+EVL
Subjt:  AKKIIVEVEVL

A0A5A7U1L8 Retrotrans_gag domain-containing protein6.0e-2680.95Show/hide
Query:  INCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETEAKKIIVEVEVL
        +NC+LA ENEKLREEVKKWVQ  VNTQRDLDE KRK+LE EK NDSLNT+AIQVRKKNKRLLRNI DLHEE EAKK  +E+EVL
Subjt:  INCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETEAKKIIVEVEVL

A0A5D3D0S2 Glial fibrillary acidic protein-like9.8e-3781.08Show/hide
Query:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE
        M ESLVPNIELKKYH DKEK LKRLRE+NC++A ENEKLREEVKKWVQ  VNTQRDLDE KRK LE EK NDSLNT+AIQVRKKNKRLLRNI +LHEE E
Subjt:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE

Query:  AKKIIVEVEVL
        AKK  +E+EVL
Subjt:  AKKIIVEVEVL

A0A5D3DZT4 Glial fibrillary acidic protein-like2.3e-46100Show/hide
Query:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE
        MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE
Subjt:  MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETE

Query:  AKKI
        AKKI
Subjt:  AKKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAATCTTTAGTGCCAAACATAGAATTGAAGAAATATCATGATGATAAAGAAAAGAATTTGAAGCGGTTGAGAGAAATAAATTGTCTTTTGGCAATAGAGAACGA
AAAGTTGAGAGAAGAAGTCAAGAAATGGGTCCAGCTAACTGTTAATACTCAAAGAGATTTGGATGAGACGAAACGAAAGCAATTGGAGCAGGAGAAGAATAACGATTCTT
TAAATACTAAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAACATTGTCGACTTGCATGAAGAGACAGAAGCTAAAAAGATTATTGTGGAGGTCGAGGTT
CTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGAATCTTTAGTGCCAAACATAGAATTGAAGAAATATCATGATGATAAAGAAAAGAATTTGAAGCGGTTGAGAGAAATAAATTGTCTTTTGGCAATAGAGAACGA
AAAGTTGAGAGAAGAAGTCAAGAAATGGGTCCAGCTAACTGTTAATACTCAAAGAGATTTGGATGAGACGAAACGAAAGCAATTGGAGCAGGAGAAGAATAACGATTCTT
TAAATACTAAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAACATTGTCGACTTGCATGAAGAGACAGAAGCTAAAAAGATTATTGTGGAGGTCGAGGTT
CTATGATAATCAGTTAAAGAATACAAGTCTCAGCTTATAGAAGTGAAAAGCAAAAACAGATTTCTACAAAAAGTCGTTAATAATTCTAAAGGCTAGGTGCTGATATGTCG
CAAGGCAAGGAAGGTCGCAACATATGACTACGCTTAATTAATAGAAAAATATCAAGAAATGTAGATAGATTTCATGATATGGAGGGATGTGTACGACACATTGAGACGCA
AGTATGACGGTGCTAGAGGTCAGATAGAACAAGAGGCTGAAAAATT
Protein sequenceShow/hide protein sequence
MLESLVPNIELKKYHDDKEKNLKRLREINCLLAIENEKLREEVKKWVQLTVNTQRDLDETKRKQLEQEKNNDSLNTKAIQVRKKNKRLLRNIVDLHEETEAKKIIVEVEV
L