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MELO3C034202 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034202
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr10:15010542..15010981
RNA-Seq ExpressionMELO3C034202
SyntenyMELO3C034202
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.9e-2085.48Show/hide
Query:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
        +E GNDQLKAIANWPKEKRA E+EL AEV+KQLQDIPELQSRDRAKL+QI+FRSVE IEGFL
Subjt:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
KAA0063430.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.9e-2087.1Show/hide
Query:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
        ME GNDQLKAIANWPKEKRA E+EL  EVVKQLQDIPELQS+DRAKLMQI+FRSVE IEGFL
Subjt:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
KAA0067183.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.7e-24100Show/hide
Query:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
        MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
Subjt:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
TYK26031.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.7e-24100Show/hide
Query:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
        MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
Subjt:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.4e-1877.42Show/hide
Query:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
        ME GN+QLKAIA+WPKEKRA+E+E+ A+VVKQLQDIP+L+S+DRAKLMQI+FRS+E IEGFL
Subjt:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
TrEMBL top hitse value%identityAlignment
A0A5A7SQU2 Putative nuclease HARBI19.4e-2185.48Show/hide
Query:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
        +E GNDQLKAIANWPKEKRA E+EL AEV+KQLQDIPELQSRDRAKL+QI+FRSVE IEGFL
Subjt:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
A0A5A7U0H7 Retrotransposon protein6.7e-1977.42Show/hide
Query:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
        ME GN+QLKAIA+WPKEKRA+E+E+ A+VVKQLQDIP+L+S+DRAKLMQI+FRS+E IEGFL
Subjt:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
A0A5A7V8C5 Putative nuclease HARBI19.4e-2187.1Show/hide
Query:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
        ME GNDQLKAIANWPKEKRA E+EL  EVVKQLQDIPELQS+DRAKLMQI+FRSVE IEGFL
Subjt:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
A0A5A7VGH2 Putative nuclease HARBI18.2e-25100Show/hide
Query:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
        MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
Subjt:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
A0A5D3DQT0 Putative nuclease HARBI18.2e-25100Show/hide
Query:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
        MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
Subjt:  MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTGGAAATGATCAATTAAAGGCAATTGCAAATTGGCCAAAAGAGAAGCGTGCAATAGAGATCGAATTGCATGCTGAAGTTGTGAAACAGCTGCAAGATATCCC
TGAACTACAAAGCCGAGATAGGGCAAAGCTTATGCAAATCATATTTCGTAGTGTGGAGGTCATTGAGGGATTCTTGTAG
mRNA sequenceShow/hide mRNA sequence
TGTTTAATGATGATGTTGCACTAGGTGATTCACCTGATCAAGACATCCCCATGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAGATGTTTGGAATACGTGCAGGT
CAAGCAAGTGAGAAAAAAAATTGTTCAAGTGGAAGTAAGAGAAAATGAGGTAGTGAACATTATGAAACGGTAGAGGTGACCAGGAGTGTAATGGAACTTGGAAATGATCA
ATTAAAGGCAATTGCAAATTGGCCAAAAGAGAAGCGTGCAATAGAGATCGAATTGCATGCTGAAGTTGTGAAACAGCTGCAAGATATCCCTGAACTACAAAGCCGAGATA
GGGCAAAGCTTATGCAAATCATATTTCGTAGTGTGGAGGTCATTGAGGGATTCTTGTAGATTCCAATAGAACTTAAATTAGAGAATTGCAATATTCTCTTGCAAAATTAG
Protein sequenceShow/hide protein sequence
MELGNDQLKAIANWPKEKRAIEIELHAEVVKQLQDIPELQSRDRAKLMQIIFRSVEVIEGFL