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MELO3C034207 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034207
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGag/pol protein
Genome locationchr08:21876950..21877204
RNA-Seq ExpressionMELO3C034207
SyntenyMELO3C034207
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035756.1 gag/pol protein [Cucumis melo var. makuwa]2.9e-1790.38Show/hide
Query:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
        +KKKGKGKTPKNSKGKKVAK KCYHCNE+ HWL NCPKYLAEKKAEKEAQGK
Subjt:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
KAA0041767.1 gag/pol protein [Cucumis melo var. makuwa]7.1e-1688.24Show/hide
Query:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQG
        MKKK KGKTPKNS+GKKVAK KCYHCNED HWL NCPKY AEKKAEKEAQG
Subjt:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQG
KAA0045181.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-1586.54Show/hide
Query:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
        +KKK KGK PKNSKGKKVAK KCYHCNED+HWL NC KYLAEKKAEKEAQGK
Subjt:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
KAA0047525.1 gag/pol protein [Cucumis melo var. makuwa]9.3e-1686.27Show/hide
Query:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQG
        MKKK KGKTPKNSKGKKVAK KCYHCNED+HWL NCPKYL +KKAEKEA+G
Subjt:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQG
TYK29862.1 gag/pol protein [Cucumis melo var. makuwa]2.9e-1790.38Show/hide
Query:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
        +KKKGKGKTPKNSKGKKVAK KCYHCNED HWL NCP+YLAEKKAEKEAQGK
Subjt:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
TrEMBL top hitse value%identityAlignment
A0A5A7T0L9 Gag/pol protein1.4e-1790.38Show/hide
Query:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
        +KKKGKGKTPKNSKGKKVAK KCYHCNE+ HWL NCPKYLAEKKAEKEAQGK
Subjt:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
A0A5A7TUI5 Gag/pol protein5.9e-1686.54Show/hide
Query:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
        +KKK KGK PKNSKGKKVAK KCYHCNED+HWL NC KYLAEKKAEKEAQGK
Subjt:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
A0A5A7U1L7 Gag/pol protein4.5e-1686.27Show/hide
Query:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQG
        MKKK KGKTPKNSKGKKVAK KCYHCNED+HWL NCPKYL +KKAEKEA+G
Subjt:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQG
A0A5D3DTN5 Gag/pol protein3.4e-1688.24Show/hide
Query:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQG
        MKKK KGKTPKNS+GKKVAK KCYHCNED HWL NCPKY AEKKAEKEAQG
Subjt:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQG
A0A5D3E1U5 Gag/pol protein1.4e-1790.38Show/hide
Query:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
        +KKKGKGKTPKNSKGKKVAK KCYHCNED HWL NCP+YLAEKKAEKEAQGK
Subjt:  MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGAAGGGAAAGGGGAAGACTCCCAAGAATAGTAAGGGAAAGAAAGTTGCTAAAAGTAAATGTTACCATTGCAACGAGGACAAACATTGGTTGAGCAATTGCCC
GAAGTACCTTGCTGAGAAGAAAGCTGAGAAGGAAGCACAAGGTAAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCGGGAAAGAAAGTGGTAGCAAATGTTGCTACCACAGAAAGAGAGTTAGTGAGAGGATCGTCCTCTAAGACTAGAGTTGGACCTTTCACATATGAAAAAGAAGG
GAAAGGGGAAGACTCCCAAGAATAGTAAGGGAAAGAAAGTTGCTAAAAGTAAATGTTACCATTGCAACGAGGACAAACATTGGTTGAGCAATTGCCCGAAGTACCTTGCT
GAGAAGAAAGCTGAGAAGGAAGCACAAGGTAAATA
Protein sequenceShow/hide protein sequence
MKKKGKGKTPKNSKGKKVAKSKCYHCNEDKHWLSNCPKYLAEKKAEKEAQGK