; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C034295 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034295
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionU4/U6 small nuclear ribonucleoprotein Prp3
Genome locationchr10:7470218..7470958
RNA-Seq ExpressionMELO3C034295
SyntenyMELO3C034295
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025904.1 U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo var. makuwa]1.8e-0792.5Show/hide
Query:  QKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
        QKEL EKLKKIPLLKMHVQTLSPVLTLAIASNSAIVL +L
Subjt:  QKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
KAA0032487.1 70-Kd heat shock protein [Cucumis melo var. makuwa]1.1e-0790.24Show/hide
Query:  MQKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
        MQKELVEKLKKIPLLKMHVQTLSPVLT+ IASNSAIVL +L
Subjt:  MQKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
KAA0047405.1 U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo var. makuwa]3.1e-0794.74Show/hide
Query:  QKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLN
        QKEL EKLKKIPLLKMHVQTLSPVLTLAIASNSAIVL+
Subjt:  QKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLN
KAA0051592.1 hypothetical protein E6C27_scaffold174G001360 [Cucumis melo var. makuwa]2.1e-0895.12Show/hide
Query:  MQKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
        MQKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVL +L
Subjt:  MQKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
TrEMBL top hitse value%identityAlignment
A0A5A7SJN6 U4/U6 small nuclear ribonucleoprotein Prp38.7e-0892.5Show/hide
Query:  QKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
        QKEL EKLKKIPLLKMHVQTLSPVLTLAIASNSAIVL +L
Subjt:  QKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
A0A5A7ST05 70-Kd heat shock protein5.1e-0890.24Show/hide
Query:  MQKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
        MQKELVEKLKKIPLLKMHVQTLSPVLT+ IASNSAIVL +L
Subjt:  MQKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
A0A5A7U191 U4/U6 small nuclear ribonucleoprotein Prp31.5e-0794.74Show/hide
Query:  QKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLN
        QKEL EKLKKIPLLKMHVQTLSPVLTLAIASNSAIVL+
Subjt:  QKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLN
A0A5A7U769 Uncharacterized protein1.0e-0895.12Show/hide
Query:  MQKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
        MQKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVL +L
Subjt:  MQKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAAGAATTAGTCGAGAAGTTGAAGAAAATTCCCCTGTTGAAAATGCATGTCCAAACATTGTCTCCTGTGCTGACATTAGCCATTGCATCTAATTCAGCCATCGT
CTTGAACCAACTAATGCAAGAATCTATTTCAATATTGCACAAAAAGGTGAATAACATAGTTTTAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAAGAATTAGTCGAGAAGTTGAAGAAAATTCCCCTGTTGAAAATGCATGTCCAAACATTGTCTCCTGTGCTGACATTAGCCATTGCATCTAATTCAGCCATCGT
CTTGAACCAACTAATGCAAGAATCTATTTCAATATTGCACAAAAAGGTGAATAACATAGTTTTAGAGTAA
Protein sequenceShow/hide protein sequence
MQKELVEKLKKIPLLKMHVQTLSPVLTLAIASNSAIVLNQLMQESISILHKKVNNIVLE