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MELO3C034357 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034357
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:11743242..11745734
RNA-Seq ExpressionMELO3C034357
SyntenyMELO3C034357
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032946.1 uncharacterized protein E6C27_scaffold269G00200 [Cucumis melo var. makuwa]4.7e-0962.69Show/hide
Query:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM
        + KTGQLVFTRNQEVSG     +     +++  +KLKRSCA DSGSGSV RVI +YARGIRFI LQ+
Subjt:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM

KAA0035073.1 uncharacterized protein E6C27_scaffold57G001380 [Cucumis melo var. makuwa]1.5e-0749.53Show/hide
Query:  QLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM-------------IDEIFINYTTEILSMRLEITMCTLV
        QLVFTRNQEVSG +   +     +++  +KLKRSCA DSGSGSV RVI VYARGIRFI LQ+             + EI      + LS+R ++     V
Subjt:  QLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM-------------IDEIFINYTTEILSMRLEITMCTLV

Query:  SLGLLVK
        SLGLLVK
Subjt:  SLGLLVK

KAA0042134.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.0e-1153.54Show/hide
Query:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQMIDEIFINYTTEILSMRLEITMCTLVSLGLLVK
        +KKTGQLVFTRNQEVSG +   +     +++  DKLKRSCA+DSGSGSV RVI VYARGIRFI LQ+           +L++ +      +VSLG LVK
Subjt:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQMIDEIFINYTTEILSMRLEITMCTLVSLGLLVK

KAA0043123.1 transposase [Cucumis melo var. makuwa]1.8e-0862.69Show/hide
Query:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM
        L+  GQLVFTRNQEVSG +   +     +++  +KLKRSCA DSGSGSV RVI VYARGIRFI LQ+
Subjt:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM

KAA0056684.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.6e-1065.67Show/hide
Query:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM
        +KKTGQLVFTRNQEVSG +   +     +++  +KLKRSCA DSGSGSV RVI VYARGIRFI LQ+
Subjt:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM

TrEMBL top hitse value%identityAlignment
A0A5A7SSI1 Reverse transcriptase domain-containing protein2.3e-0962.69Show/hide
Query:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM
        + KTGQLVFTRNQEVSG     +     +++  +KLKRSCA DSGSGSV RVI +YARGIRFI LQ+
Subjt:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM

A0A5A7SX02 CCHC-type domain-containing protein7.3e-0849.53Show/hide
Query:  QLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM-------------IDEIFINYTTEILSMRLEITMCTLV
        QLVFTRNQEVSG +   +     +++  +KLKRSCA DSGSGSV RVI VYARGIRFI LQ+             + EI      + LS+R ++     V
Subjt:  QLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM-------------IDEIFINYTTEILSMRLEITMCTLV

Query:  SLGLLVK
        SLGLLVK
Subjt:  SLGLLVK

A0A5A7TFC5 Reverse transcriptase1.4e-1153.54Show/hide
Query:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQMIDEIFINYTTEILSMRLEITMCTLVSLGLLVK
        +KKTGQLVFTRNQEVSG +   +     +++  DKLKRSCA+DSGSGSV RVI VYARGIRFI LQ+           +L++ +      +VSLG LVK
Subjt:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQMIDEIFINYTTEILSMRLEITMCTLVSLGLLVK

A0A5A7TIE3 Transposase8.7e-0962.69Show/hide
Query:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM
        L+  GQLVFTRNQEVSG +   +     +++  +KLKRSCA DSGSGSV RVI VYARGIRFI LQ+
Subjt:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM

A0A5A7UNA3 Reverse transcriptase2.7e-1065.67Show/hide
Query:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM
        +KKTGQLVFTRNQEVSG +   +     +++  +KLKRSCA DSGSGSV RVI VYARGIRFI LQ+
Subjt:  LKKTGQLVFTRNQEVSGRNHEPKTTKN-QLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCTCTGGAAGAAATCATGAACCCAAAACGACTAAAAATCAGTTAAATTGTAGGGACAAGTTA
AAGAGGTCGTGTGCGTATGATTCTGGAAGTGGTTCTGTTTCGAGGGTTATCGGAGTTTATGCACGGGGAATCAGATTTATATATCTTCAGATGATTGATGAAATT
TTCATTAACTACACGACTGAGATCTTGAGCATGAGGCTAGAGATTACCATGTGCACACTGGTGTCTTTAGGTTTACTCGTGAAATTGTGTTGTGTGTTGCGCTTT
AAAGATCATGTTGGAAAAAAACAAACATTGATCATCGTTGTTGTGCCGTGTCGAACCACTACCTCGAAAGCAAAATTCGGCGCGACCTCGGTGCTAAATCGCATA
TGCCGGGTTGCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
TGCTGAAGAAAACAGGGCAGTTGGTTTTCACTCGAAATCAGGAGGTCTCTGGAAGAAATCATGAACCCAAAACGACTAAAAATCAGTTAAATTGTAGGGACAAGT
TAAAGAGGTCGTGTGCGTATGATTCTGGAAGTGGTTCTGTTTCGAGGGTTATCGGAGTTTATGCACGGGGAATCAGATTTATATATCTTCAGATGATTGATGAAA
TTTTCATTAACTACACGACTGAGATCTTGAGCATGAGGCTAGAGATTACCATGTGCACACTGGTGTCTTTAGGTTTACTCGTGAAATTGTGTTGTGTGTTGCGCT
TTAAAGATCATGTTGGAAAAAAACAAACATTGATCATCGTTGTTGTGCCGTGTCGAACCACTACCTCGAAAGCAAAATTCGGCGCGACCTCGGTGCTAAATCGCA
TATGCCGGGTTGCTTCCTAA
Protein sequenceShow/hide protein sequence
LKKTGQLVFTRNQEVSGRNHEPKTTKNQLNCRDKLKRSCAYDSGSGSVSRVIGVYARGIRFIYLQMIDEIFINYTTEILSMRLEITMCTLVSLGLLVKLCCVLRF
KDHVGKKQTLIIVVVPCRTTTSKAKFGATSVLNRICRVAS