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MELO3C034409 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034409
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrovirus-related pol polyprotein from transposon tnt 1-94
Genome locationchr10:15640890..15666882
RNA-Seq ExpressionMELO3C034409
SyntenyMELO3C034409
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037269.1 hypothetical protein E6C27_scaffold379G001980 [Cucumis melo var. makuwa]1.8e-0953.85Show/hide
Query:  FTCLQVEIEFPASLGLLVKSINFEFFLDPLHA--KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQ
        FT   VE   P     L+ SI  +  L+ + A  +T+C T  TYWQSI KL QTKAVYQAPG+RSLPGK VKHFG+ +
Subjt:  FTCLQVEIEFPASLGLLVKSINFEFFLDPLHA--KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQ
KAA0040191.1 hypothetical protein E6C27_scaffold1164G00030 [Cucumis melo var. makuwa]3.1e-0963.46Show/hide
Query:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
        +T+C T  TYWQSI++LQQTK VYQAPGTRSLPGK VKHFG+       + K
Subjt:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
KAA0054428.1 hypothetical protein E6C27_scaffold24G001800 [Cucumis melo var. makuwa]2.8e-1073.08Show/hide
Query:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
        KT+CTTLTTYWQSISKLQQTKAVYQAP TRSL  K VKHFGR   +   + K
Subjt:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
TYJ96578.1 hypothetical protein E5676_scaffold791G00080 [Cucumis melo var. makuwa]1.4e-0965.38Show/hide
Query:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
        +T+C T  TYWQSI++LQQTKAVYQAPGTRSLPGK VKHFG+       + K
Subjt:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
TYK29683.1 hypothetical protein E5676_scaffold64G00330 [Cucumis melo var. makuwa]3.1e-0954.17Show/hide
Query:  CLQVEIEFPASLGLLVKSINFEFFLDPLHAKTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGR
        CL +  E        V  I F F       +T+C T  TYWQSI KL QTKAVYQAPG+RSLPGK VKHFG+
Subjt:  CLQVEIEFPASLGLLVKSINFEFFLDPLHAKTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGR
TrEMBL top hitse value%identityAlignment
A0A5A7T7C2 Uncharacterized protein8.8e-1053.85Show/hide
Query:  FTCLQVEIEFPASLGLLVKSINFEFFLDPLHA--KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQ
        FT   VE   P     L+ SI  +  L+ + A  +T+C T  TYWQSI KL QTKAVYQAPG+RSLPGK VKHFG+ +
Subjt:  FTCLQVEIEFPASLGLLVKSINFEFFLDPLHA--KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQ
A0A5A7UHH6 Uncharacterized protein1.4e-1073.08Show/hide
Query:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
        KT+CTTLTTYWQSISKLQQTKAVYQAP TRSL  K VKHFGR   +   + K
Subjt:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
A0A5D3BEF1 Uncharacterized protein6.7e-1065.38Show/hide
Query:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
        +T+C T  TYWQSI++LQQTKAVYQAPGTRSLPGK VKHFG+       + K
Subjt:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
A0A5D3DQW6 Uncharacterized protein1.5e-0963.46Show/hide
Query:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
        +T+C T  TYWQSI++LQQTK VYQAPGTRSLPGK VKHFG+       + K
Subjt:  KTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVK
A0A5D3E0S1 Uncharacterized protein1.5e-0954.17Show/hide
Query:  CLQVEIEFPASLGLLVKSINFEFFLDPLHAKTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGR
        CL +  E        V  I F F       +T+C T  TYWQSI KL QTKAVYQAPG+RSLPGK VKHFG+
Subjt:  CLQVEIEFPASLGLLVKSINFEFFLDPLHAKTICTTLTTYWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGTTGGGCACATGGCTGTATGGATGGCATGAGTTGGGCACACAAGACATTGTGAAGGAGAGAGTTTGGAAGGAAGTAGAAGAGAAATATTACAAGAAT
TTTGAGGTTGAAGAAGAGAAGGAGAACTCAAGCAAAGTGTATGCATGGCTGAATCTTGATTCATTCTGCACATCACTAGGAATCCGATTTACATGTCTTCAGGTA
GAGATCGAGTTCCCGGCGTCTTTAGGTTTACTCGTGAAATCAATTAATTTCGAGTTTTTCCTTGATCCCCTCCACGCAAAGACTATATGCACAACTCTAACCACG
TACTGGCAATCAATATCGAAACTTCAGCAGACTAAGGCAGTCTATCAGGCACCGGGAACTCGATCTCTACCTGGAAAGTGTGTAAAACATTTTGGAAGGAATCAG
CAGAACATTAGAGAAATGGTGAAGAAAGTGGTAGAAATAGATGGAGAAAACCTTGGTGATGGAGGAAAGAGAAGAAGAAAAGTTCACTATATCAACAACATTAAA
TATAATGTAATGGCTAGTGATAAACCATTGATAATAAGACATTATGTAGAGAAACAATGTGATGAGAGAAAAGTGAAACTTTGTGTTGATGCAATGAATACTTGT
GTTCACGAGTTTAAGATTGCTATTATGATTGAACTTGTTGTATTCCCCAAAAAAGCATCTCGATCTCCTTGCATTACAATACCATGCCTAGTGTCACGCCCCACC
TCAAATGCCACGCCATATGACCAAATGGAGAGCGTGCCGTCTAGACATTCATCACATACTTCTCGCAAGATAGACACTCATACTCCCATCATTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATGGTTGGGCACATGGCTGTATGGATGGCATGAGTTGGGCACACAAGACATTGTGAAGGAGAGAGTTTGGAAGGAAGTAGAAGAGAAATATTACAAGAAT
TTTGAGGTTGAAGAAGAGAAGGAGAACTCAAGCAAAGTGTATGCATGGCTGAATCTTGATTCATTCTGCACATCACTAGGAATCCGATTTACATGTCTTCAGGTA
GAGATCGAGTTCCCGGCGTCTTTAGGTTTACTCGTGAAATCAATTAATTTCGAGTTTTTCCTTGATCCCCTCCACGCAAAGACTATATGCACAACTCTAACCACG
TACTGGCAATCAATATCGAAACTTCAGCAGACTAAGGCAGTCTATCAGGCACCGGGAACTCGATCTCTACCTGGAAAGTGTGTAAAACATTTTGGAAGGAATCAG
CAGAACATTAGAGAAATGGTGAAGAAAGTGGTAGAAATAGATGGAGAAAACCTTGGTGATGGAGGAAAGAGAAGAAGAAAAGTTCACTATATCAACAACATTAAA
TATAATGTAATGGCTAGTGATAAACCATTGATAATAAGACATTATGTAGAGAAACAATGTGATGAGAGAAAAGTGAAACTTTGTGTTGATGCAATGAATACTTGT
GTTCACGAGTTTAAGATTGCTATTATGATTGAACTTGTTGTATTCCCCAAAAAAGCATCTCGATCTCCTTGCATTACAATACCATGCCTAGTGTCACGCCCCACC
TCAAATGCCACGCCATATGACCAAATGGAGAGCGTGCCGTCTAGACATTCATCACATACTTCTCGCAAGATAGACACTCATACTCCCATCATTGTCTAA
Protein sequenceShow/hide protein sequence
MAWLGTWLYGWHELGTQDIVKERVWKEVEEKYYKNFEVEEEKENSSKVYAWLNLDSFCTSLGIRFTCLQVEIEFPASLGLLVKSINFEFFLDPLHAKTICTTLTT
YWQSISKLQQTKAVYQAPGTRSLPGKCVKHFGRNQQNIREMVKKVVEIDGENLGDGGKRRRKVHYINNIKYNVMASDKPLIIRHYVEKQCDERKVKLCVDAMNTC
VHEFKIAIMIELVVFPKKASRSPCITIPCLVSRPTSNATPYDQMESVPSRHSSHTSRKIDTHTPIIV