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MELO3C034411 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034411
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRibosome biogenesis protein BRX1-like protein
Genome locationchr10:15960636..15972997
RNA-Seq ExpressionMELO3C034411
SyntenyMELO3C034411
Gene Ontology termsGO:0042254 - ribosome biogenesis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR026532 - Ribosome biogenesis protein BRX1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031641.1 ribosome biogenesis protein BRX1-like protein [Cucumis melo var. makuwa]3.1e-3468.29Show/hide
Query:  GPKQKERILIAKGCSFSKNRCNELLSSSILISMITYLHALDLIGILHKKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRP
        GPKQKERI +AKGCSFSKNRCNE                               FNDFGT+ GP AKYLNPSFLTSP FFAFSA+EELKLIGNYLKGSRP
Subjt:  GPKQKERILIAKGCSFSKNRCNELLSSSILISMITYLHALDLIGILHKKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRP

Query:  ILTFSSNFDKDVLWKLLKEMIIQ
        ILTFSSNFDKDVLWKL+KEMIIQ
Subjt:  ILTFSSNFDKDVLWKLLKEMIIQ

KAF9672837.1 hypothetical protein SADUNF_Sadunf11G0085700 [Salix dunnii]2.1e-1152.38Show/hide
Query:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH
        +K K LY       GGP+ K+L           A   +EELKL GN+LKGSRP+LTFS+NFDKD  WKLLKEMIIQ F +  +H
Subjt:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH

XP_008456708.1 PREDICTED: ribosome biogenesis protein BRX1 homolog [Cucumis melo]2.5e-1287.23Show/hide
Query:  AFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTS
        A SA+EELKLIGNYLKGSRPILTFSSNFDKDVLWKL+KEMIIQ   S
Subjt:  AFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTS

XP_008460241.1 PREDICTED: ribosome biogenesis protein BRX1 homolog [Cucumis melo]3.3e-2084.62Show/hide
Query:  SAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMKAKASCIFLSWNIF
        SAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMK   +  F   N F
Subjt:  SAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMKAKASCIFLSWNIF

XP_011659901.2 ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus]1.1e-1237.44Show/hide
Query:  SENLPTVD-QRPSNSPTRRKRKSTGQNEKWSLDESEKGGP----KQKERILIAKGCSFSKN-RCNELLSSSILI---------------SMITYLHALDL
        SE+LPTV  ++  ++P R KR   G  +K    ESE G      + KE++L+   CS   N R   L+ + + +                  T    ++L
Subjt:  SENLPTVD-QRPSNSPTRRKRKSTGQNEKWSLDESEKGGP----KQKERILIAKGCSFSKN-RCNELLSSSILI---------------SMITYLHALDL

Query:  IGILH------KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH
         G         +K K LY        GP+ K+L           A   +EELKL GN+LKGSRPILTFSSNFDKDV WKLLKEMIIQ F +   H
Subjt:  IGILH------KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH

TrEMBL top hitse value%identityAlignment
A0A072VCY8 Putative ribosome biogenesis protein BRX11.0e-1150.56Show/hide
Query:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMKAK
        +KAK LY        GP+ K+L           A   +EELKL GN+LKGSRP+LTFSSNF+KD  WKLLKEM++Q F +  +H  KAK
Subjt:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMKAK

A0A1S3C4K0 ribosome biogenesis protein BRX1 homolog1.2e-1287.23Show/hide
Query:  AFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTS
        A SA+EELKLIGNYLKGSRPILTFSSNFDKDVLWKL+KEMIIQ   S
Subjt:  AFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTS

A0A1S3CC56 ribosome biogenesis protein BRX1 homolog1.6e-2084.62Show/hide
Query:  SAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMKAKASCIFLSWNIF
        SAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMK   +  F   N F
Subjt:  SAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMKAKASCIFLSWNIF

A0A444DVJ9 Brix domain-containing protein1.0e-1141.46Show/hide
Query:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH-SMKAKASCIFLSWNI
        +K K LY       GGP+ K+L           A   +EELKL GN+LKGSRPILTFS NFDK+  WKL+KE+I+Q F +   H  +K     +F+ ++I
Subjt:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH-SMKAKASCIFLSWNI

Query:  FYGHKSLRSVSLSQGLYRGGVKK
          GH   R+  +   + RGG+ K
Subjt:  FYGHKSLRSVSLSQGLYRGGVKK

A0A5A7SQ25 Ribosome biogenesis protein BRX1-like protein1.5e-3468.29Show/hide
Query:  GPKQKERILIAKGCSFSKNRCNELLSSSILISMITYLHALDLIGILHKKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRP
        GPKQKERI +AKGCSFSKNRCNE                               FNDFGT+ GP AKYLNPSFLTSP FFAFSA+EELKLIGNYLKGSRP
Subjt:  GPKQKERILIAKGCSFSKNRCNELLSSSILISMITYLHALDLIGILHKKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRP

Query:  ILTFSSNFDKDVLWKLLKEMIIQ
        ILTFSSNFDKDVLWKL+KEMIIQ
Subjt:  ILTFSSNFDKDVLWKLLKEMIIQ

SwissProt top hitse value%identityAlignment
Q3SZZ0 Ribosome biogenesis protein BRX1 homolog9.7e-0739.33Show/hide
Query:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMKAK
        KK + LY     +  GP+AK+L  +  T         + ELK+ GN LKGSRP+L+F   FD+   + LLKE++IQ F S+P +  K++
Subjt:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMKAK

Q8TDN6 Ribosome biogenesis protein BRX1 homolog9.7e-0739.33Show/hide
Query:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMKAK
        KK + LY     +  GP+AK+L  +  T         + ELK+ GN LKGSRP+L+F   FD+   + LLKE++IQ F S+P +  K++
Subjt:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNHSMKAK

Q8UVY2 Ribosome biogenesis protein BRX1 homolog7.4e-0739.29Show/hide
Query:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH
        KK + LY     +  GP+AK+L  +  T         + ELK+ GN LKGSRPIL+F   FD++  + LLKE++ Q F +   H
Subjt:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH

Q9C928 Ribosome biogenesis protein BRX1 homolog 27.7e-1234.36Show/hide
Query:  DSENLPTVDQRPSNSPTRRKRKSTGQNEKWSLDESEK------GGPKQKERILI--AKGCSF----------------SKNRCNELLSS--SILISMITY
        ++E    V +    +P R KR   G  +K S  E+EK       G K KE++L+  ++  SF                 K+   E  SS  + L  +I  
Subjt:  DSENLPTVDQRPSNSPTRRKRKSTGQNEKWSLDESEK------GGPKQKERILI--AKGCSF----------------SKNRCNELLSS--SILISMITY

Query:  LHALDLIGILHKKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH
         ++   +    +K K LY     +  GP+ K+L           A  A+EE+KL GN+LKGSRP+LTFSSNFDKD  WKLLKEM+ Q F     H
Subjt:  LHALDLIGILHKKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH

Q9LE16 Ribosome biogenesis protein BRX1 homolog 11.5e-1248.81Show/hide
Query:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH
        +K K LY     + GGP+ K+L           A   +EELKL GN+LKGSRP+LTFSSNF+ D  WKLLKEM+ Q F     H
Subjt:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH

Arabidopsis top hitse value%identityAlignment
AT1G52930.1 Ribosomal RNA processing Brix domain protein5.4e-1334.36Show/hide
Query:  DSENLPTVDQRPSNSPTRRKRKSTGQNEKWSLDESEK------GGPKQKERILI--AKGCSF----------------SKNRCNELLSS--SILISMITY
        ++E    V +    +P R KR   G  +K S  E+EK       G K KE++L+  ++  SF                 K+   E  SS  + L  +I  
Subjt:  DSENLPTVDQRPSNSPTRRKRKSTGQNEKWSLDESEK------GGPKQKERILI--AKGCSF----------------SKNRCNELLSS--SILISMITY

Query:  LHALDLIGILHKKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH
         ++   +    +K K LY     +  GP+ K+L           A  A+EE+KL GN+LKGSRP+LTFSSNFDKD  WKLLKEM+ Q F     H
Subjt:  LHALDLIGILHKKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH

AT3G15460.1 Ribosomal RNA processing Brix domain protein1.1e-1348.81Show/hide
Query:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH
        +K K LY     + GGP+ K+L           A   +EELKL GN+LKGSRP+LTFSSNF+ D  WKLLKEM+ Q F     H
Subjt:  KKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLKEMIIQKFTSSPNH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTGTTGGCATGACTATTGTTGCCAATTCCTCCCCTTATGTGAATTTTTTTCTCAATATTCATATGGGTAAAGATTGGGAGTTTGGGACCGTTCTTCTCTCGAT
TTTTCTTCTTCTAGGCTTGGATGAGTTCATGCCCCTTTTAAATTGGCTACTTTCTTACCTTCTTGAGAGGGTCCATTGTGTTGATTCAGAAAATCTTCCGACCGTCGACC
AGCGTCCTTCAAACAGTCCTACTAGACGAAAACGAAAATCTACTGGCCAAAATGAGAAGTGGTCGCTTGATGAAAGCGAAAAGGGTGGTCCTAAACAAAAAGAAAGAATT
TTAATAGCAAAGGGTTGTTCTTTTTCTAAGAATAGGTGCAATGAGCTCCTCTCTTCTTCGATCTTGATCTCTATGATCACTTACTTGCATGCTTTAGATTTAATTGGCAT
TTTGCATAAGAAAGCTAAAAGACTCTATTTCAATGATTTTGGTACTGATGGAGGACCGGCAGCCAAGTATCTTAATCCAAGTTTTCTTACTTCTCCATTTTTTTTTGCTT
TCAGTGCAATAGAAGAATTGAAGCTTATAGGGAACTATCTTAAAGGTTCCCGTCCAATTTTGACATTTTCATCGAATTTTGATAAAGATGTCCTCTGGAAACTTCTGAAG
GAAATGATTATTCAGAAATTCACATCTTCTCCTAATCACAGTATGAAGGCCAAGGCCTCATGCATATTCCTTTCATGGAATATATTTTACGGTCACAAATCCCTTCGTTC
AGTATCCTTATCACAGGGTCTTTATCGCGGTGGCGTTAAGAAGAGAATGAGAGTTTTGTTCAAAGATCTTGGGACAAAACTGTTCAGAGTCAGTCTTGTATGGCCGAAAG
AAAAGATCGAGAAAAGACAGAAGATCAACGTAGAGAGAAGAAGTAGAGAGAAGTTGAGTTGCTTGCAAGTTTTGGAGCAAAACAATAGGGTAGTCCAGTCAAGCTTTAGT
TGGGTGTTCGGTATAGAGGCTCTAAATCTATTGGAAGCTAGTGTGGAGCTAGGGCAAACTCGAAGAATCGATCTTGAGCAAGCTAAGATCACCCAAGGAGTTCAAATATA
TCAAGGGCAAGAGGAAATAGGACAAATCTATAAACCAAGAATCTATCCAAAAGTTGAAGAGATCATAGTTCTAACGCCTGTTAAAGCTCCGCCTACTCGATCTACTAGAA
AGTCGACAAGTGTCGTTAGAAGAAGAACAATGCTAGTTGGCTTCACGCCACATCTCAAGCCTAGTGAGGAGGTTCTTGAAAGTCGACTTGTTACACATGAAGCCATCCAA
GATTTAATCAAGCTGTCAAATGCCATAATTGTGGAAGAAAGGAAGAGTTTGGAGCTACATCATATGACACTTCGAATTACTTTGTGTTTGTTTATGGTTTATGGTCTATG
GTCTATGGTCTATGGTCTATGGTCTATGGTGGTGGTAGAAGACTATGGCATCCAAGGAGGCCCTCGTCTCTTACTTTGTCTATGTGATGGAAACTCTTGGCATCTACTGG
ATACCCTCATCACACAACCTCTGTGCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTGTTGGCATGACTATTGTTGCCAATTCCTCCCCTTATGTGAATTTTTTTCTCAATATTCATATGGGTAAAGATTGGGAGTTTGGGACCGTTCTTCTCTCGAT
TTTTCTTCTTCTAGGCTTGGATGAGTTCATGCCCCTTTTAAATTGGCTACTTTCTTACCTTCTTGAGAGGGTCCATTGTGTTGATTCAGAAAATCTTCCGACCGTCGACC
AGCGTCCTTCAAACAGTCCTACTAGACGAAAACGAAAATCTACTGGCCAAAATGAGAAGTGGTCGCTTGATGAAAGCGAAAAGGGTGGTCCTAAACAAAAAGAAAGAATT
TTAATAGCAAAGGGTTGTTCTTTTTCTAAGAATAGGTGCAATGAGCTCCTCTCTTCTTCGATCTTGATCTCTATGATCACTTACTTGCATGCTTTAGATTTAATTGGCAT
TTTGCATAAGAAAGCTAAAAGACTCTATTTCAATGATTTTGGTACTGATGGAGGACCGGCAGCCAAGTATCTTAATCCAAGTTTTCTTACTTCTCCATTTTTTTTTGCTT
TCAGTGCAATAGAAGAATTGAAGCTTATAGGGAACTATCTTAAAGGTTCCCGTCCAATTTTGACATTTTCATCGAATTTTGATAAAGATGTCCTCTGGAAACTTCTGAAG
GAAATGATTATTCAGAAATTCACATCTTCTCCTAATCACAGTATGAAGGCCAAGGCCTCATGCATATTCCTTTCATGGAATATATTTTACGGTCACAAATCCCTTCGTTC
AGTATCCTTATCACAGGGTCTTTATCGCGGTGGCGTTAAGAAGAGAATGAGAGTTTTGTTCAAAGATCTTGGGACAAAACTGTTCAGAGTCAGTCTTGTATGGCCGAAAG
AAAAGATCGAGAAAAGACAGAAGATCAACGTAGAGAGAAGAAGTAGAGAGAAGTTGAGTTGCTTGCAAGTTTTGGAGCAAAACAATAGGGTAGTCCAGTCAAGCTTTAGT
TGGGTGTTCGGTATAGAGGCTCTAAATCTATTGGAAGCTAGTGTGGAGCTAGGGCAAACTCGAAGAATCGATCTTGAGCAAGCTAAGATCACCCAAGGAGTTCAAATATA
TCAAGGGCAAGAGGAAATAGGACAAATCTATAAACCAAGAATCTATCCAAAAGTTGAAGAGATCATAGTTCTAACGCCTGTTAAAGCTCCGCCTACTCGATCTACTAGAA
AGTCGACAAGTGTCGTTAGAAGAAGAACAATGCTAGTTGGCTTCACGCCACATCTCAAGCCTAGTGAGGAGGTTCTTGAAAGTCGACTTGTTACACATGAAGCCATCCAA
GATTTAATCAAGCTGTCAAATGCCATAATTGTGGAAGAAAGGAAGAGTTTGGAGCTACATCATATGACACTTCGAATTACTTTGTGTTTGTTTATGGTTTATGGTCTATG
GTCTATGGTCTATGGTCTATGGTCTATGGTGGTGGTAGAAGACTATGGCATCCAAGGAGGCCCTCGTCTCTTACTTTGTCTATGTGATGGAAACTCTTGGCATCTACTGG
ATACCCTCATCACACAACCTCTGTGCACATGACAATCTCCCTCGTAGGCTTGCTCAAGACCGGTTCTTTAAACTTGCCATAGCTCAACATGAGCTCGCAGATCTAGTGCC
TAAAATAAGAAATCCCAACTTATCTCGAGATAGTCCGAGACAACTCGAAACCTTTCTGTCTTTCAACTCGGTCAACAAGCATCGAGATGGTCCTATCTTAGCATCAGGAT
TTGCTCTCTATTTTCCATCTCGCCCACCAAGACCAAGTCTGAACACTTCTGTCCCGAGATCTTGGACAAAACTCTTGAAAACAAAGCATTACAAAACTATTCAAACATTT
GATGTTGTAGCCTCCACTAAAGTAGCATGTAACTTGGAGGCCGCCTCTAAAACACATTGCCTATCAAAAAGAGCTGACACAACAGCAACACCTCTAAGATTTGGGATACC
AATTCCCATCACAGCAGCTGCATTAGTGCTCGTGTTGCCTAACAATATTTCTCTTTTGTACCTTTATTATCATCAGAAAATAATAAGAAACATTCATACCTTGGTCTTTC
TCCATTTACTAGGGTTTCCACATAGACCTCGTCTTCTTCGTCTTTATGTTTCGATATGGTATCAGAGCGAGATATCGATGAACCCCTAG
Protein sequenceShow/hide protein sequence
MGIVGMTIVANSSPYVNFFLNIHMGKDWEFGTVLLSIFLLLGLDEFMPLLNWLLSYLLERVHCVDSENLPTVDQRPSNSPTRRKRKSTGQNEKWSLDESEKGGPKQKERI
LIAKGCSFSKNRCNELLSSSILISMITYLHALDLIGILHKKAKRLYFNDFGTDGGPAAKYLNPSFLTSPFFFAFSAIEELKLIGNYLKGSRPILTFSSNFDKDVLWKLLK
EMIIQKFTSSPNHSMKAKASCIFLSWNIFYGHKSLRSVSLSQGLYRGGVKKRMRVLFKDLGTKLFRVSLVWPKEKIEKRQKINVERRSREKLSCLQVLEQNNRVVQSSFS
WVFGIEALNLLEASVELGQTRRIDLEQAKITQGVQIYQGQEEIGQIYKPRIYPKVEEIIVLTPVKAPPTRSTRKSTSVVRRRTMLVGFTPHLKPSEEVLESRLVTHEAIQ
DLIKLSNAIIVEERKSLELHHMTLRITLCLFMVYGLWSMVYGLWSMVVVEDYGIQGGPRLLLCLCDGNSWHLLDTLITQPLCT