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MELO3C034457 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034457
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGag/pol protein
Genome locationchr10:18570660..18572311
RNA-Seq ExpressionMELO3C034457
SyntenyMELO3C034457
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034955.1 gag/pol protein [Cucumis melo var. makuwa]8.1e-0696.3Show/hide
Query:  DKTEWGARNIITQDGIHSFPPLGSIRS
        DKTEWGA NIITQDGIHSFPPLGSIRS
Subjt:  DKTEWGARNIITQDGIHSFPPLGSIRS
KAA0042877.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.9e-0582.76Show/hide
Query:  GDKTEWGARNIITQDGIHSFPPLGSIRSL
        GDKTEWGA NIITQDGIHSFPPLG   S+
Subjt:  GDKTEWGARNIITQDGIHSFPPLGSIRSL
KAA0043328.1 gag/pol protein [Cucumis melo var. makuwa]8.1e-0696.3Show/hide
Query:  DKTEWGARNIITQDGIHSFPPLGSIRS
        DKTEWGA NIITQDGIHSFPPLGSIRS
Subjt:  DKTEWGARNIITQDGIHSFPPLGSIRS
KAA0052795.1 gag/pol protein [Cucumis melo var. makuwa]2.4e-0592.59Show/hide
Query:  DKTEWGARNIITQDGIHSFPPLGSIRS
        D+TEWGA NIITQDGIHSFPPLGSIRS
Subjt:  DKTEWGARNIITQDGIHSFPPLGSIRS
KAA0054558.1 hypothetical protein E6C27_scaffold24G003480 [Cucumis melo var. makuwa]1.2e-0443.24Show/hide
Query:  FFWSDILTCHQATKRNYNRSLIATLPNPH-EWSNCRLNMLIIL-------GDKTEWGARNIITQDGIHSFPPLG
        F+ +  L C    +R  +R     +   H + S   +   I+L       GDKTEWGA NIITQDGIHSFPPLG
Subjt:  FFWSDILTCHQATKRNYNRSLIATLPNPH-EWSNCRLNMLIIL-------GDKTEWGARNIITQDGIHSFPPLG
TrEMBL top hitse value%identityAlignment
A0A5A7T0G5 Gag/pol protein3.9e-0696.3Show/hide
Query:  DKTEWGARNIITQDGIHSFPPLGSIRS
        DKTEWGA NIITQDGIHSFPPLGSIRS
Subjt:  DKTEWGARNIITQDGIHSFPPLGSIRS
A0A5A7TKJ4 Gag/pol protein3.9e-0696.3Show/hide
Query:  DKTEWGARNIITQDGIHSFPPLGSIRS
        DKTEWGA NIITQDGIHSFPPLGSIRS
Subjt:  DKTEWGARNIITQDGIHSFPPLGSIRS
A0A5A7UHV6 Uncharacterized protein5.7e-0543.24Show/hide
Query:  FFWSDILTCHQATKRNYNRSLIATLPNPH-EWSNCRLNMLIIL-------GDKTEWGARNIITQDGIHSFPPLG
        F+ +  L C    +R  +R     +   H + S   +   I+L       GDKTEWGA NIITQDGIHSFPPLG
Subjt:  FFWSDILTCHQATKRNYNRSLIATLPNPH-EWSNCRLNMLIIL-------GDKTEWGARNIITQDGIHSFPPLG
A0A5D3BZ66 Gag/pol protein1.1e-0592.59Show/hide
Query:  DKTEWGARNIITQDGIHSFPPLGSIRS
        D+TEWGA NIITQDGIHSFPPLGSIRS
Subjt:  DKTEWGARNIITQDGIHSFPPLGSIRS
A0A5D3C1P5 Gag-pol polyprotein3.3e-0582.76Show/hide
Query:  GDKTEWGARNIITQDGIHSFPPLGSIRSL
        GDKTEWGA NIITQDGIHSFPPLG   S+
Subjt:  GDKTEWGARNIITQDGIHSFPPLGSIRSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTTTAGTTTCAAGAACTTTTATTAGCAATCATTTCTTTTGGTCCGACATCCTAACTTGCCACCAAGCTACTAAGAGGAACTACAACAGATCTTTGATAGCAACA
CTTCCCAATCCTCATGAGTGGTCAAATTGCCGACTCAATATGCTTATCATTTTGGGGGACAAGACTGAGTGGGGAGCTAGGAACATAATCACACAAGATGGAATT
CACTCATTCCCACCTTTAGGGTCTATTAGGTCCCTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
AGCTTTAGTTTCAAGAACTTTTATTAGCAATCATTTCTTTTGGTCCGACATCCTAACTTGCCACCAAGCTACTAAGAGGAACTACAACAGATCTTTGATAGCAAC
ACTTCCCAATCCTCATGAGTGGTCAAATTGCCGACTCAATATGCTTATCATTTTGGGGGACAAGACTGAGTGGGGAGCTAGGAACATAATCACACAAGATGGAAT
TCACTCATTCCCACCTTTAGGGTCTATTAGGTCCCTTTTCTAG
Protein sequenceShow/hide protein sequence
ALVSRTFISNHFFWSDILTCHQATKRNYNRSLIATLPNPHEWSNCRLNMLIILGDKTEWGARNIITQDGIHSFPPLGSIRSLF