; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C034475 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034475
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionhomeobox-leucine zipper protein HOX3-like
Genome locationchr10:19729946..19731142
RNA-Seq ExpressionMELO3C034475
SyntenyMELO3C034475
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR009057 - Homeobox-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454737.1 PREDICTED: homeobox-leucine zipper protein HOX3-like [Cucumis melo]2.0e-5598.32Show/hide
Query:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
        MAILPTGTSRLDLSISVPGFNSFSSSLTPS GRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
Subjt:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV

Query:  LNLKPRQVEVWFQNRRASS
        LNLKPRQVEVWFQNRRA S
Subjt:  LNLKPRQVEVWFQNRRASS

XP_011654500.1 homeobox-leucine zipper protein HOX3 isoform X4 [Cucumis sativus]3.9e-5494.12Show/hide
Query:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
        MAILPT TSRLDLSISVPGFNSFSS+L PSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNG+NNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
Subjt:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV

Query:  LNLKPRQVEVWFQNRRASS
        L LKPRQ+EVWFQNRRA S
Subjt:  LNLKPRQVEVWFQNRRASS

XP_011654501.1 homeobox-leucine zipper protein HOX3 isoform X5 [Cucumis sativus]2.8e-5293.28Show/hide
Query:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
        MAILPT TSRLDLSISVPGFNSFSS+L PS GRDLDMNKAPDEEEWMMGTMEEDEEINNNG+NNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
Subjt:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV

Query:  LNLKPRQVEVWFQNRRASS
        L LKPRQ+EVWFQNRRA S
Subjt:  LNLKPRQVEVWFQNRRASS

XP_031741099.1 homeobox-leucine zipper protein HOX3 isoform X1 [Cucumis sativus]1.1e-5394.87Show/hide
Query:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
        MAILPT TSRLDLSISVPGFNSFSS+L PSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNG+NNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
Subjt:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV

Query:  LNLKPRQVEVWFQNRRA
        L LKPRQ+EVWFQNRRA
Subjt:  LNLKPRQVEVWFQNRRA

XP_031741103.1 homeobox-leucine zipper protein ATHB-17 isoform X7 [Cucumis sativus]1.1e-5394.87Show/hide
Query:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
        MAILPT TSRLDLSISVPGFNSFSS+L PSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNG+NNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
Subjt:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV

Query:  LNLKPRQVEVWFQNRRA
        L LKPRQ+EVWFQNRRA
Subjt:  LNLKPRQVEVWFQNRRA

TrEMBL top hitse value%identityAlignment
A0A0A0KJE2 Homeobox domain-containing protein1.9e-5494.12Show/hide
Query:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
        MAILPT TSRLDLSISVPGFNSFSS+L PSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNG+NNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
Subjt:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV

Query:  LNLKPRQVEVWFQNRRASS
        L LKPRQ+EVWFQNRRA S
Subjt:  LNLKPRQVEVWFQNRRASS

A0A1S3BYV1 homeobox-leucine zipper protein HOX3-like9.9e-5698.32Show/hide
Query:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
        MAILPTGTSRLDLSISVPGFNSFSSSLTPS GRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV
Subjt:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEV

Query:  LNLKPRQVEVWFQNRRASS
        LNLKPRQVEVWFQNRRA S
Subjt:  LNLKPRQVEVWFQNRRASS

A0A6J1D7F8 homeobox-leucine zipper protein HOX3-like9.0e-4179.49Show/hide
Query:  PTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEI--NNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLN
        P  +SRLDL+ISVPGF+SF S   PS  RDLDMN+AP+EEEWMMG+MEEDEEI  NNNG  +PRKKLRLTKEQSHLLEQ+FRQNHTLNPKQKE LAE+L 
Subjt:  PTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEWMMGTMEEDEEI--NNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLN

Query:  LKPRQVEVWFQNRRASS
        LKPRQVEVWFQNRRA S
Subjt:  LKPRQVEVWFQNRRASS

A0A6J1FWC2 homeobox-leucine zipper protein HOX3-like6.0e-4584.17Show/hide
Query:  MAILPTGTSRLDLSISVPGFNSFSSS-LTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAE
        MA+LPT +SRLDL+ISVPGF SFSSS L PS  RDLDMN+APDEEEWMMG+MEEDEE  NN  ++PRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAE
Subjt:  MAILPTGTSRLDLSISVPGFNSFSSS-LTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAE

Query:  VLNLKPRQVEVWFQNRRASS
        VL LKPRQVEVWFQNRRA S
Subjt:  VLNLKPRQVEVWFQNRRASS

A0A6J1IG52 homeobox-leucine zipper protein HOX3-like8.7e-4482.5Show/hide
Query:  MAILPTGTSRLDLSISVPGFNSFSSS-LTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAE
        MA+LPT +SRLDL+ISVPG  SFSSS L PS  RDLDMN+APDEEEWMMG+MEEDEE  NN  ++PRKKLRLTKEQSHLLEQSFRQNHTLNPKQKE+LAE
Subjt:  MAILPTGTSRLDLSISVPGFNSFSSS-LTPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAE

Query:  VLNLKPRQVEVWFQNRRASS
        VL LKPRQVEVWFQNRRA S
Subjt:  VLNLKPRQVEVWFQNRRASS

SwissProt top hitse value%identityAlignment
P46603 Homeobox-leucine zipper protein HAT91.3e-1543.79Show/hide
Query:  YFTFLSLSQILQIKPSSLLLSCSQFPQLEFILMAILPTGTSRL-DLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEW---MMGTMEEDEEINNNGNNN
        Y + +  S + +++P SL L  S  P +  +      TG  +L   + S  G +SFSS       RD    ++P+EEE    ++    EDEE       +
Subjt:  YFTFLSLSQILQIKPSSLLLSCSQFPQLEFILMAILPTGTSRL-DLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEW---MMGTMEEDEEINNNGNNN

Query:  PRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVEVWFQNRRA
         RKKLRLTK+QS LLE+SF+ + TLNPKQK+ LA  LNL+PRQVEVWFQNRRA
Subjt:  PRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVEVWFQNRRA

Q0JKX1 Homeobox-leucine zipper protein HOX34.0e-2254.03Show/hide
Query:  TGTSRLDLSISVPGFNSFSSS----LTPSVG-----RDLDMNK---APDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQ
        T  S L+L+++VPG +S  S        + G     RDLD+N+     +EEE+ MG++EEDEE    G  +  KKLRL+KEQS LLE+SFR NHTL PKQ
Subjt:  TGTSRLDLSISVPGFNSFSSS----LTPSVG-----RDLDMNK---APDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQ

Query:  KETLAEVLNLKPRQVEVWFQNRRA
        KE LA  L L+PRQVEVWFQNRRA
Subjt:  KETLAEVLNLKPRQVEVWFQNRRA

Q8GXM7 Homeobox-leucine zipper protein ATHB-X2.5e-2454.33Show/hide
Query:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVG-----RDLDMNKAP---DEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPK
        MA+ P  +S LDL+IS+P F     S +PS+G     RD D+N+ P   ++ EWM+G      E ++N     RKKLRLTKEQSHLLE+SF QNHTL PK
Subjt:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVG-----RDLDMNKAP---DEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPK

Query:  QKETLAEVLNLKPRQVEVWFQNRRASS
        QK+ LA  L L  RQVEVWFQNRRA S
Subjt:  QKETLAEVLNLKPRQVEVWFQNRRASS

Q8S9N6 Homeobox-leucine zipper protein ATHB-173.7e-2346.07Show/hide
Query:  LYVVFNLFAYCLNFF-YLQIFIIHFSLFLSLFLPLYFTFLSLSQILQIK-PSSLLLSCSQFPQLEFILMAILPTGTSRLDLSISVPGFNSFSSSLTPS-V
        LY ++++   C+  + Y  I  +   LF          F   S IL +K P++ L+           +MAILP  +S LDL+ISVPGF+S   S   S  
Subjt:  LYVVFNLFAYCLNFF-YLQIFIIHFSLFLSLFLPLYFTFLSLSQILQIK-PSSLLLSCSQFPQLEFILMAILPTGTSRLDLSISVPGFNSFSSSLTPS-V

Query:  GRD---LDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVEVWFQNRRASS
        GRD   LDMN+ P  E+      +++E  +++G+  PRKKLRLT+EQS LLE SFRQNHTLNPKQKE LA+ L L+PRQ+EVWFQNRRA S
Subjt:  GRD---LDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVEVWFQNRRASS

Q9XH38 Homeobox-leucine zipper protein HOX34.0e-2254.03Show/hide
Query:  TGTSRLDLSISVPGFNSFSSS----LTPSVG-----RDLDMNK---APDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQ
        T  S L+L+++VPG +S  S        + G     RDLD+N+     +EEE+ MG++EEDEE    G  +  KKLRL+KEQS LLE+SFR NHTL PKQ
Subjt:  TGTSRLDLSISVPGFNSFSSS----LTPSVG-----RDLDMNK---APDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQ

Query:  KETLAEVLNLKPRQVEVWFQNRRA
        KE LA  L L+PRQVEVWFQNRRA
Subjt:  KETLAEVLNLKPRQVEVWFQNRRA

Arabidopsis top hitse value%identityAlignment
AT1G70920.1 homeobox-leucine zipper protein 181.8e-2554.33Show/hide
Query:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVG-----RDLDMNKAP---DEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPK
        MA+ P  +S LDL+IS+P F     S +PS+G     RD D+N+ P   ++ EWM+G      E ++N     RKKLRLTKEQSHLLE+SF QNHTL PK
Subjt:  MAILPTGTSRLDLSISVPGFNSFSSSLTPSVG-----RDLDMNKAP---DEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPK

Query:  QKETLAEVLNLKPRQVEVWFQNRRASS
        QK+ LA  L L  RQVEVWFQNRRA S
Subjt:  QKETLAEVLNLKPRQVEVWFQNRRASS

AT2G01430.1 homeobox-leucine zipper protein 172.6e-2446.07Show/hide
Query:  LYVVFNLFAYCLNFF-YLQIFIIHFSLFLSLFLPLYFTFLSLSQILQIK-PSSLLLSCSQFPQLEFILMAILPTGTSRLDLSISVPGFNSFSSSLTPS-V
        LY ++++   C+  + Y  I  +   LF          F   S IL +K P++ L+           +MAILP  +S LDL+ISVPGF+S   S   S  
Subjt:  LYVVFNLFAYCLNFF-YLQIFIIHFSLFLSLFLPLYFTFLSLSQILQIK-PSSLLLSCSQFPQLEFILMAILPTGTSRLDLSISVPGFNSFSSSLTPS-V

Query:  GRD---LDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVEVWFQNRRASS
        GRD   LDMN+ P  E+      +++E  +++G+  PRKKLRLT+EQS LLE SFRQNHTLNPKQKE LA+ L L+PRQ+EVWFQNRRA S
Subjt:  GRD---LDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVEVWFQNRRASS

AT2G22800.1 Homeobox-leucine zipper protein family8.9e-1743.79Show/hide
Query:  YFTFLSLSQILQIKPSSLLLSCSQFPQLEFILMAILPTGTSRL-DLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEW---MMGTMEEDEEINNNGNNN
        Y + +  S + +++P SL L  S  P +  +      TG  +L   + S  G +SFSS       RD    ++P+EEE    ++    EDEE       +
Subjt:  YFTFLSLSQILQIKPSSLLLSCSQFPQLEFILMAILPTGTSRL-DLSISVPGFNSFSSSLTPSVGRDLDMNKAPDEEEW---MMGTMEEDEEINNNGNNN

Query:  PRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVEVWFQNRRA
         RKKLRLTK+QS LLE+SF+ + TLNPKQK+ LA  LNL+PRQVEVWFQNRRA
Subjt:  PRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVEVWFQNRRA

AT3G60390.1 homeobox-leucine zipper protein 35.8e-1658.57Show/hide
Query:  MGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVEVWFQNRRA
        +G   +DE+ + NG+++ RKKLRL+KEQ+ +LE++F+++ TLNPKQK  LA+ LNL+ RQVEVWFQNRRA
Subjt:  MGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVEVWFQNRRA

AT5G06710.1 homeobox from Arabidopsis thaliana4.4e-1647.22Show/hide
Query:  LSISVPGFNSFSSSL---TPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVE
        +S+S P   + S  L     S G +   NK   ++E          E N++ N + RKKLRL+K+QS  LE SF+++ TLNPKQK  LA+ LNL+PRQVE
Subjt:  LSISVPGFNSFSSSL---TPSVGRDLDMNKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVE

Query:  VWFQNRRA
        VWFQNRRA
Subjt:  VWFQNRRA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATTATCTCTATGTTGTATTTAACCTTTTTGCATATTGTCTCAACTTTTTCTATCTTCAAATTTTCATCATCCATTTCTCTCTCTTCCTCTCTCTCTTTTTGCCT
CTCTACTTTACCTTTCTATCTCTCTCCCAAATATTACAAATAAAACCTTCAAGTCTTCTTCTCTCTTGTTCTCAATTTCCACAGCTTGAATTCATTCTCATGGCA
ATTTTGCCCACCGGCACTTCAAGATTGGACCTCTCCATCTCTGTACCAGGCTTCAACTCATTCTCATCATCACTCACTCCATCTGTAGGGAGAGATTTGGACATG
AACAAAGCTCCAGATGAAGAGGAATGGATGATGGGAACTATGGAAGAAGATGAAGAAATTAATAACAATGGAAACAATAATCCAAGAAAGAAACTGCGTTTAACG
AAGGAACAATCTCATCTTCTTGAACAAAGCTTTAGACAAAACCATACTTTAAACCCAAAACAGAAGGAGACTTTGGCAGAAGTGTTGAACTTGAAACCAAGGCAG
GTTGAAGTTTGGTTTCAGAATCGAAGGGCCAGCTCAGACGTTTGTTTTCCTATCTCACATTTTGATGGTTAA
mRNA sequenceShow/hide mRNA sequence
TACATTATCTCTATGTTGTATTTAACCTTTTTGCATATTGTCTCAACTTTTTCTATCTTCAAATTTTCATCATCCATTTCTCTCTCTTCCTCTCTCTCTTTTTGC
CTCTCTACTTTACCTTTCTATCTCTCTCCCAAATATTACAAATAAAACCTTCAAGTCTTCTTCTCTCTTGTTCTCAATTTCCACAGCTTGAATTCATTCTCATGG
CAATTTTGCCCACCGGCACTTCAAGATTGGACCTCTCCATCTCTGTACCAGGCTTCAACTCATTCTCATCATCACTCACTCCATCTGTAGGGAGAGATTTGGACA
TGAACAAAGCTCCAGATGAAGAGGAATGGATGATGGGAACTATGGAAGAAGATGAAGAAATTAATAACAATGGAAACAATAATCCAAGAAAGAAACTGCGTTTAA
CGAAGGAACAATCTCATCTTCTTGAACAAAGCTTTAGACAAAACCATACTTTAAACCCAAAACAGAAGGAGACTTTGGCAGAAGTGTTGAACTTGAAACCAAGGC
AGGTTGAAGTTTGGTTTCAGAATCGAAGGGCCAGCTCAGACGTTTGTTTTCCTATCTCACATTTTGATGGTTAA
Protein sequenceShow/hide protein sequence
HYLYVVFNLFAYCLNFFYLQIFIIHFSLFLSLFLPLYFTFLSLSQILQIKPSSLLLSCSQFPQLEFILMAILPTGTSRLDLSISVPGFNSFSSSLTPSVGRDLDM
NKAPDEEEWMMGTMEEDEEINNNGNNNPRKKLRLTKEQSHLLEQSFRQNHTLNPKQKETLAEVLNLKPRQVEVWFQNRRASSDVCFPISHFDG