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MELO3C034480 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034480
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGag/pol protein
Genome locationchr10:20564739..20565050
RNA-Seq ExpressionMELO3C034480
SyntenyMELO3C034480
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035676.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-3789.25Show/hide
Query:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE
        MNSSIVQLLAS+KLNGDNYATWKSNLNTILV DDLRF+LTEECPQT  SNANRASR+AYDRWIKANEKARVYILASMSDVLAKKHE L   KE
Subjt:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE

KAA0041460.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-3789.25Show/hide
Query:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE
        MNSSIVQLL+SEKLNGDNYA WKSNLNTILV DDLRFVLTEECP+T  SNANR SRKAYDRWIKANEKARVYILASMSDVLAKKHESL   KE
Subjt:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE

KAA0043451.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-3789.25Show/hide
Query:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE
        MNSSIVQLLAS+KLN DNYA WKSNLNTILV DDLRFVLTEECPQTLASNANR SR+AYDRWIKANEKA VYILASMSDVLAKKHESL   KE
Subjt:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE

KAA0050552.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-3789.25Show/hide
Query:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE
        MNSSIVQLLASEKLNGDNYA WKSNLNTILV DDLRF+LTEECPQT ASNANRASRKAYDRWIKANEKA VYILASM+DVLAKKHESL   K+
Subjt:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE

KAA0056365.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-49100Show/hide
Query:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKESPCLHRI
        MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKESPCLHRI
Subjt:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKESPCLHRI

Query:  SGS
        SGS
Subjt:  SGS

TrEMBL top hitse value%identityAlignment
A0A5A7T0E9 Gag/pol protein1.1e-3789.25Show/hide
Query:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE
        MNSSIVQLLAS+KLNGDNYATWKSNLNTILV DDLRF+LTEECPQT  SNANRASR+AYDRWIKANEKARVYILASMSDVLAKKHE L   KE
Subjt:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE

A0A5D3BBF3 Gag/pol protein1.8e-3789.25Show/hide
Query:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE
        MNS IVQLLASEKLN DNY TWKSNLNTILV DDLRFVLTEECPQTLASNANR SR+AYDRWIKANEKARVYIL+SMSDVLAKKHESL   KE
Subjt:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE

A0A5D3D5J6 Gag/pol protein8.2e-3889.25Show/hide
Query:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE
        MNSSIVQLLASEKLNGDNYA WKSNLNTILV DDLRF+LTEECPQT ASNANRASRKAYDRWIKANEKA VYILASM+DVLAKKHESL   K+
Subjt:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE

A0A5D3DL59 Gag/pol protein8.2e-3889.25Show/hide
Query:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE
        MNSSIVQLL+SEKLNGDNYA WKSNLNTILV DDLRFVLTEECP+T  SNANR SRKAYDRWIKANEKARVYILASMSDVLAKKHESL   KE
Subjt:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKE

A0A5D3E0W1 Gag/pol protein5.5e-50100Show/hide
Query:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKESPCLHRI
        MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKESPCLHRI
Subjt:  MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKESPCLHRI

Query:  SGS
        SGS
Subjt:  SGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGCTCGATAGTTCAATTGTTAGCTTCCGAAAAACTTAACGGCGATAACTATGCGACATGGAAATCAAATCTTAACACAATACTAGTTGCTGATGATTTA
CGGTTTGTCTTAACTGAGGAATGTCCTCAAACCCTGGCCTCAAATGCAAACCGAGCTAGTCGGAAAGCATATGATCGATGGATAAAAGCAAATGAGAAAGCTCGT
GTCTACATTCTTGCTAGCATGTCAGATGTTTTAGCGAAGAAACATGAGTCCTTGGATAAAGGCAAAGAAAGCCCGTGCCTTCATAGGATCAGTGGGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATAGCTCGATAGTTCAATTGTTAGCTTCCGAAAAACTTAACGGCGATAACTATGCGACATGGAAATCAAATCTTAACACAATACTAGTTGCTGATGATTTA
CGGTTTGTCTTAACTGAGGAATGTCCTCAAACCCTGGCCTCAAATGCAAACCGAGCTAGTCGGAAAGCATATGATCGATGGATAAAAGCAAATGAGAAAGCTCGT
GTCTACATTCTTGCTAGCATGTCAGATGTTTTAGCGAAGAAACATGAGTCCTTGGATAAAGGCAAAGAAAGCCCGTGCCTTCATAGGATCAGTGGGTCTTAA
Protein sequenceShow/hide protein sequence
MNSSIVQLLASEKLNGDNYATWKSNLNTILVADDLRFVLTEECPQTLASNANRASRKAYDRWIKANEKARVYILASMSDVLAKKHESLDKGKESPCLHRISGS