; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C034862 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034862
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr11:7903243..7904296
RNA-Seq ExpressionMELO3C034862
SyntenyMELO3C034862
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040447.1 transposase [Cucumis melo var. makuwa]7.1e-3496.25Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
        MNSDRFEVLGQMARDILAIPVS V SES FSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE

KAA0066355.1 transposase [Cucumis melo var. makuwa]1.7e-35100Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
        MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE

TYK03730.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.4e-3497.5Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
        MNSDRFEVLGQMARDILAIPVS VVSES FSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE

TYK23433.1 putative transposase [Cucumis melo var. makuwa]7.1e-3496.25Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
        MNSDRFEVLGQMARDILAIPVS V SES FSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE

TYK28895.1 putative transposase [Cucumis melo var. makuwa]7.1e-3496.25Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
        MNSDRFEVLGQMARDILAIPVS V SES FSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE

TrEMBL top hitse value%identityAlignment
A0A5A7VKR8 Transposase8.2e-36100Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
        MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE

A0A5D3BX83 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.2e-3497.5Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
        MNSDRFEVLGQMARDILAIPVS VVSES FSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like3.4e-3496.25Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
        MNSDRFEVLGQMARDILAIPVS V SES FSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like3.4e-3496.25Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
        MNSDRFEVLGQMARDILAIPVS V SES FSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE

A0A5D3DZY7 Putative transposase3.4e-3496.25Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
        MNSDRFEVLGQMARDILAIPVS V SES FSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEE

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 11.5e-0748.48Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVS-ESTFS--TGGRVVDSSRCSLAPKTVEALICTQNWLNSDP
        +N+ ++  L +MARDILAIP+S+V S  S FS  TG R++D  R S  P+ VEAL+C ++WL   P
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVS-ESTFS--TGGRVVDSSRCSLAPKTVEALICTQNWLNSDP

P03010 Putative AC9 transposase7.4e-1059.26Show/hide
Query:  FEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWL
        + +L Q+ARD+LAI VS V SES FS GGRVVD  R  L  + VEALICT++W+
Subjt:  FEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWL

P08770 Putative AC transposase7.4e-1059.26Show/hide
Query:  FEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWL
        + +L Q+ARD+LAI VS V SES FS GGRVVD  R  L  + VEALICT++W+
Subjt:  FEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWL

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.4e-0851.52Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVS-ESTFS--TGGRVVDSSRCSLAPKTVEALICTQNWLNSDP
        +N+ +F  L +MARDILAIP+S+V S  S FS  TG R++D  R SL P+ VEAL+C ++WL   P
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVS-ESTFS--TGGRVVDSSRCSLAPKTVEALICTQNWLNSDP

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 33.7e-0946.27Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTF----STGGRVVDSSRCSLAPKTVEALICTQNWLNSDP
        +N+ +F  L +MARD+LAIP+S+V S S+     +TG +++D  R SL P+TVEAL C ++WL   P
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTF----STGGRVVDSSRCSLAPKTVEALICTQNWLNSDP

Arabidopsis top hitse value%identityAlignment
AT1G18560.1 BED zinc finger ;hAT family dimerisation domain8.1e-0427.87Show/hide
Query:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNS
        +NS R+  L  MARD LA+  +    E  F   G  +D  +  +   + +++IC ++W+ +
Subjt:  MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNS

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain3.2e-0846.55Show/hide
Query:  NSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWL
        N  ++  L +MARDIL+IPVS    +  F    R +D  + SL P+TVEALIC + WL
Subjt:  NSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGTGATCGATTTGAGGTTCTTGGTCAAATGGCTAGAGATATTTTGGCTATTCCAGTTTCTATTGTAGTGTCTGAGTCGACTTTTAGTACTGGAGGACGTGTTGT
TGACTCATCACGCTGCTCATTGGCTCCTAAAACAGTGGAGGCTCTCATATGTACTCAAAATTGGCTAAATTCTGATCCAATACATCTTCAATTTCAACATGAATTGGAAG
AGGCTTCAAAATTTGAAGAAGAAAGCAAGAAACATAGAAAAGGAAGGAGGAGGAGGAGAAGAAACAGGAAAGAAAGAAAGAAGGAAAGGAAAAAAAAAAGAAAAAGAAAA
ACCGACCGACCCGAACCGACCCGACCGCCAGTTGGACCGGCCGGTTTGGTTAGAACCGGCGGTCGAGGCCGATTTTCATACTTCCGTGCCGATTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAGTGATCGATTTGAGGTTCTTGGTCAAATGGCTAGAGATATTTTGGCTATTCCAGTTTCTATTGTAGTGTCTGAGTCGACTTTTAGTACTGGAGGACGTGTTGT
TGACTCATCACGCTGCTCATTGGCTCCTAAAACAGTGGAGGCTCTCATATGTACTCAAAATTGGCTAAATTCTGATCCAATACATCTTCAATTTCAACATGAATTGGAAG
AGGCTTCAAAATTTGAAGAAGAAAGCAAGAAACATAGAAAAGGAAGGAGGAGGAGGAGAAGAAACAGGAAAGAAAGAAAGAAGGAAAGGAAAAAAAAAAGAAAAAGAAAA
ACCGACCGACCCGAACCGACCCGACCGCCAGTTGGACCGGCCGGTTTGGTTAGAACCGGCGGTCGAGGCCGATTTTCATACTTCCGTGCCGATTTGTAGTCGGTTCGGGG
CGGTTTGGTCGGAAAACCGACCCCGACCGCCCGATGCTCACCCCTAG
Protein sequenceShow/hide protein sequence
MNSDRFEVLGQMARDILAIPVSIVVSESTFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEEESKKHRKGRRRRRRNRKERKKERKKKRKRK
TDRPEPTRPPVGPAGLVRTGGRGRFSYFRADL