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MELO3C034982 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C034982
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr11:12775976..12776194
RNA-Seq ExpressionMELO3C034982
SyntenyMELO3C034982
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048191.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-1384Show/hide
Query:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH
        ML+TRG LEATQYVDVEEM AI LHIV HDVKNRVARRHFARSD  V RH
Subjt:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH

KAA0059805.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.3e-1776.39Show/hide
Query:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRHSSTLFLMQFLDSMKSFLSNLIQ
        ML+TRG LEATQYV+VEEMVAI LHIV HDVKNR+ARRHFAR  +     +STLF  QFLDSMKSFLSNLIQ
Subjt:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRHSSTLFLMQFLDSMKSFLSNLIQ

TYK06362.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-1386Show/hide
Query:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH
        ML+TRG LEATQYVDVEEMVAI LHIV HDVKNRVARRHFARS E V RH
Subjt:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH

TYK08067.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-1384Show/hide
Query:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH
        ML+TRG LEATQYVDVEEM AI LHIV HDVKNRVARRHFARSD  V RH
Subjt:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH

XP_008463037.1 PREDICTED: uncharacterized protein LOC103501276 [Cucumis melo]9.2e-1486Show/hide
Query:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH
        ML+TRG LEATQYVDVEEMVAILLHIV HDVKN+VARR+FARSDE V RH
Subjt:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH

TrEMBL top hitse value%identityAlignment
A0A1S3CJV8 uncharacterized protein LOC1035012764.4e-1486Show/hide
Query:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH
        ML+TRG LEATQYVDVEEMVAILLHIV HDVKN+VARR+FARSDE V RH
Subjt:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH

A0A5A7U3R2 Retrotransposon protein1.7e-1384Show/hide
Query:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH
        ML+TRG LEATQYVDVEEM AI LHIV HDVKNRVARRHFARSD  V RH
Subjt:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH

A0A5A7V1R3 Putative nuclease HARBI11.1e-1776.39Show/hide
Query:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRHSSTLFLMQFLDSMKSFLSNLIQ
        ML+TRG LEATQYV+VEEMVAI LHIV HDVKNR+ARRHFAR  +     +STLF  QFLDSMKSFLSNLIQ
Subjt:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRHSSTLFLMQFLDSMKSFLSNLIQ

A0A5D3C542 Retrotransposon protein7.6e-1486Show/hide
Query:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH
        ML+TRG LEATQYVDVEEMVAI LHIV HDVKNRVARRHFARS E V RH
Subjt:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH

A0A5D3C7X6 Retrotransposon protein1.7e-1384Show/hide
Query:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH
        ML+TRG LEATQYVDVEEM AI LHIV HDVKNRVARRHFARSD  V RH
Subjt:  MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAAAACAAGAGGGGCATTGGAAGCCACTCAATATGTGGACGTTGAAGAGATGGTTGCGATTTTGTTGCATATTGTAGTACACGATGTTAAGAATAGGGTAGCTCG
ACGACATTTTGCAAGATCTGATGAAATAGTGTTAAGACACTCTTCAACGCTGTTCTTAATGCAGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAAAACAAGAGGGGCATTGGAAGCCACTCAATATGTGGACGTTGAAGAGATGGTTGCGATTTTGTTGCATATTGTAGTACACGATGTTAAGAATAGGGTAGCTCG
ACGACATTTTGCAAGATCTGATGAAATAGTGTTAAGACACTCTTCAACGCTGTTCTTAATGCAGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAGTGA
Protein sequenceShow/hide protein sequence
MLKTRGALEATQYVDVEEMVAILLHIVVHDVKNRVARRHFARSDEIVLRHSSTLFLMQFLDSMKSFLSNLIQ