CuGenDBv2

Gene ID	MELO3C035005
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	3'-5' exonuclease domain-containing protein
Genome location	chr11:14149873..14153152
RNA-Seq Expression	MELO3C035005
Synteny	MELO3C035005
Gene Ontology terms	GO:0010587 - miRNA catabolic process (biological process) GO:0030422 - production of siRNA involved in RNA interference (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0010494 - cytoplasmic stress granule (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0050943.1 exonuclease mut-7-like protein isoform X1 [Cucumis melo var. makuwa]

1.5e-90

79.82

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Query:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA
        ++GYT AVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNKLKSAYGVIKKNDLQKEFPDVYQKCK         SLKNLA
Subjt:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA

Query:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL
        E+GCWD AEAK NSNRQFLEYLVYLALEAGYF+KVDELCNRYSLTGFLN K                       ER+GSYGQKL NHYLNLNQLIAGDIL
Subjt:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL

Query:  WVDNADALHHATRHIEEC
        WVDNADALHHATRHIEEC
Subjt:  WVDNADALHHATRHIEEC

KAA0060856.1 exonuclease mut-7-like protein isoform X3 [Cucumis melo var. makuwa]

4.8e-102

77.69

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Query:  MKSPNLFDIVSSVCFCLLGVHCRSQAIAASFVCVSFRRCPWLLVRCFIVALSRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLH
        MKSPNLFDIVSSVC  ++GVHCRSQAIAASFVCVSFRRCPWLLV       S                    SL  SMLQNNEFKAAEKWATFMGNPMLH
Subjt:  MKSPNLFDIVSSVCFCLLGVHCRSQAIAASFVCVSFRRCPWLLVRCFIVALSRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLH

Query:  LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN
        LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN
Subjt:  LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN

Query:  NKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALH
        NK                       ERKGSYGQKLPNHYLNLNQLIAGDILWVDNA AL+
Subjt:  NKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALH

TYK01099.1 exonuclease mut-7-like protein isoform X3 [Cucumis melo var. makuwa]

1.0e-115

80.88

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Query:  MKSPNLFDIVSSVCFCLLGVHCRSQAIAASFVCVSFRRCPWLLVRCFIVALSRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLH
        MKSPNLFDIVSSVCFCLLGVHCRSQAIAASFVCVSFRRCPWLLV       S                    SL  SMLQNNEFKAAEKWATFMGNPMLH
Subjt:  MKSPNLFDIVSSVCFCLLGVHCRSQAIAASFVCVSFRRCPWLLVRCFIVALSRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLH

Query:  LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN
        LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN
Subjt:  LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN

Query:  NKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALHHATRHIEECSCR
        NK                       ERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALHHATRHIEECSCR
Subjt:  NKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALHHATRHIEECSCR

XP_008450552.1 PREDICTED: uncharacterized protein LOC103492118 [Cucumis melo]

1.5e-90

79.82

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Query:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA
        ++GYT AVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNKLKSAYGVIKKNDLQKEFPDVYQKCK         SLKNLA
Subjt:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA

Query:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL
        E+GCWD AEAK NSNRQFLEYLVYLALEAGYF+KVDELCNRYSLTGFLN K                       ER+GSYGQKL NHYLNLNQLIAGDIL
Subjt:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL

Query:  WVDNADALHHATRHIEEC
        WVDNADALHHATRHIEEC
Subjt:  WVDNADALHHATRHIEEC

XP_038880060.1 uncharacterized protein LOC120071757 isoform X1 [Benincasa hispida]

4.5e-84

74.77

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Query:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA
        ++ Y  AVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMG PML LLVQ+LINRNKLKSAYG+IKKND QKEFPDVYQKCK         SLKNLA
Subjt:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA

Query:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL
        E+GCWD AEAK NSNRQFLEYLVYLALEAGYF+KVDELCNRYSLTGFLN K                       ER+G YGQK  NHYLNLNQLI GDIL
Subjt:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL

Query:  WVDNADALHHATRHIEEC
        WVDNADAL HAT H+EEC
Subjt:  WVDNADALHHATRHIEEC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWB0 3'-5' exonuclease domain-containing protein

4.9e-84

74.77

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Query:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA
        ++GY  AVDVLEHFSIHQSGQSLLY MLQNNEFKAAEKWATFMG  MLHLLVQ+LINRNKLKSAYGVIKKNDLQKEFPDVYQKCK         SLKNLA
Subjt:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA

Query:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL
        E+GCWD AEAK N+NRQFLEYLVYLALEAGYF+KVDELC RYSLTGFLN K                       ER+GSY QKLPNHYL+LNQLI G+IL
Subjt:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL

Query:  WVDNADALHHATRHIEEC
        W+DNADALH AT HIEEC
Subjt:  WVDNADALHHATRHIEEC

A0A1S3BPE9 uncharacterized protein LOC103492118

7.0e-91

79.82

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Query:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA
        ++GYT AVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNKLKSAYGVIKKNDLQKEFPDVYQKCK         SLKNLA
Subjt:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA

Query:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL
        E+GCWD AEAK NSNRQFLEYLVYLALEAGYF+KVDELCNRYSLTGFLN K                       ER+GSYGQKL NHYLNLNQLIAGDIL
Subjt:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL

Query:  WVDNADALHHATRHIEEC
        WVDNADALHHATRHIEEC
Subjt:  WVDNADALHHATRHIEEC

A0A5A7V2X1 Exonuclease mut-7-like protein isoform X3

2.3e-102

77.69

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Query:  MKSPNLFDIVSSVCFCLLGVHCRSQAIAASFVCVSFRRCPWLLVRCFIVALSRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLH
        MKSPNLFDIVSSVC  ++GVHCRSQAIAASFVCVSFRRCPWLLV       S                    SL  SMLQNNEFKAAEKWATFMGNPMLH
Subjt:  MKSPNLFDIVSSVCFCLLGVHCRSQAIAASFVCVSFRRCPWLLVRCFIVALSRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLH

Query:  LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN
        LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN
Subjt:  LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN

Query:  NKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALH
        NK                       ERKGSYGQKLPNHYLNLNQLIAGDILWVDNA AL+
Subjt:  NKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALH

A0A5D3BSN1 Exonuclease mut-7-like protein isoform X3

4.8e-116

80.88

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Query:  MKSPNLFDIVSSVCFCLLGVHCRSQAIAASFVCVSFRRCPWLLVRCFIVALSRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLH
        MKSPNLFDIVSSVCFCLLGVHCRSQAIAASFVCVSFRRCPWLLV       S                    SL  SMLQNNEFKAAEKWATFMGNPMLH
Subjt:  MKSPNLFDIVSSVCFCLLGVHCRSQAIAASFVCVSFRRCPWLLVRCFIVALSRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLH

Query:  LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN
        LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN
Subjt:  LLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLN

Query:  NKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALHHATRHIEECSCR
        NK                       ERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALHHATRHIEECSCR
Subjt:  NKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALHHATRHIEECSCR

A0A5D3CG08 Exonuclease mut-7-like protein isoform X1

7.0e-91

79.82

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Query:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA
        ++GYT AVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMG PMLHLLVQ+LINRNKLKSAYGVIKKNDLQKEFPDVYQKCK         SLKNLA
Subjt:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA

Query:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL
        E+GCWD AEAK NSNRQFLEYLVYLALEAGYF+KVDELCNRYSLTGFLN K                       ER+GSYGQKL NHYLNLNQLIAGDIL
Subjt:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL

Query:  WVDNADALHHATRHIEEC
        WVDNADALHHATRHIEEC
Subjt:  WVDNADALHHATRHIEEC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G56310.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein

4.9e-44

43.12

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Query:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA
        S+ +  AV +LEHFS    G++ L  M+++  F+AAE+WATFMG P L +LVQ+  +RN LK AY +I KN LQ +FP++Y KCK         +LK LA
Subjt:  SRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRNKLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLA

Query:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL
        E+ CWD AE K   +RQ L+YLVYLA+EAGY +KVDELC+RYSL G    K    ++  VE                          +L LN L   D++
Subjt:  EEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAARKQRIERKGSYGQKLPNHYLNLNQLIAGDIL

Query:  WVDNADALHHATRHIEEC
        WVD  + L  AT  +E C
Subjt:  WVDNADALHHATRHIEEC

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAAAGCCCTAACTTGTTCGACATCGTCTCTTCTGTCTGCTTCTGTCTGCTTGGTGTTCATTGTCGCTCGCAAGCCATTGCCGCCTCTTTTGTCTGCGTGTCATTTCG
TCGTTGCCCGTGGTTGCTCGTTCGTTGCTTCATCGTGGCCCTTTCCCGTGGTTACACGGCAGCTGTTGATGTATTAGAGCATTTCTCTATTCACCAATCTGGGCAGTCTC
TTCTCTATAGCATGCTGCAGAACAATGAATTTAAAGCAGCTGAGAAATGGGCCACTTTCATGGGAAATCCAATGTTACATTTGCTTGTCCAGGACTTGATAAATAGAAAC
AAGCTAAAAAGTGCATATGGAGTTATAAAGAAAAATGATTTGCAGAAGGAATTTCCCGATGTCTATCAGAAGTGTAAGAGAGGTACTTTGGTAACCCCTATGCTCTCCTT
GAAGAATTTAGCCGAAGAAGGATGTTGGGATGGTGCTGAGGCAAAAATAAACAGCAATAGGCAATTTCTTGAATATTTGGTTTACTTGGCATTGGAAGCTGGTTATTTCA
AAAAAGTTGATGAACTTTGCAATAGGTACTCCCTTACAGGTTTTCTGAATAACAAAGGCATCTCGCAGAAAATTTTGCAAGTAGAAAATAAAGAGCTAAAAGGCGCTGCA
AGAAAACAAAGAATTGAACGTAAGGGAAGTTATGGACAGAAGTTACCGAACCACTATTTGAATCTTAATCAACTAATTGCTGGAGATATTTTATGGGTTGACAATGCTGA
TGCTTTACATCATGCAACACGCCATATCGAGGAGTGTAGTTGTAGAAACAAGGCATATAGTATACGTATATGGGCTATTTGCAACGTTAAGCATTTAGTATCTTCTTTGA
GGCATGAAATAAAAGAGTTAAATGAGAGGTTGGAAACCGCAAATGCAAGGGCTCAATCGTTTGAGAAGAAGCAAGGATATTGCAACAAGAAAAAGTTCATATTGTAA

mRNA sequence

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Protein sequence

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MKSPNLFDIVSSVCFCLLGVHCRSQAIAASFVCVSFRRCPWLLVRCFIVALSRGYTAAVDVLEHFSIHQSGQSLLYSMLQNNEFKAAEKWATFMGNPMLHLLVQDLINRN
KLKSAYGVIKKNDLQKEFPDVYQKCKRGTLVTPMLSLKNLAEEGCWDGAEAKINSNRQFLEYLVYLALEAGYFKKVDELCNRYSLTGFLNNKGISQKILQVENKELKGAA
RKQRIERKGSYGQKLPNHYLNLNQLIAGDILWVDNADALHHATRHIEECSCRNKAYSIRIWAICNVKHLVSSLRHEIKELNERLETANARAQSFEKKQGYCNKKKFIL

MELO3C035005 (gene) of Melon (DHL92) v4 genome