; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C035019 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035019
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGlycogen debranching enzyme
Genome locationchr11:15165497..15168380
RNA-Seq ExpressionMELO3C035019
SyntenyMELO3C035019
Gene Ontology termsGO:0005977 - glycogen metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0019156 - isoamylase activity (molecular function)
InterPro domainsIPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036119.1 photosynthetic NDH subunit of subcomplex B 3 [Cucumis melo var. makuwa]2.9e-4081.9Show/hide
Query:  MTHTISSFQFLLLFSFSSHTLPFLLRTVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQ
        MTHTISSFQFLLLFSFSSH +PFLLRTVAA TTTVV  AH VPA+T+VTLPFLRS LCLPPPSV LFFDHVR+QPSPPPLHV I L GSNLVCLW DMLQ
Subjt:  MTHTISSFQFLLLFSFSSHTLPFLLRTVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQ

Query:  ERRLAVVRKKKKLVVG
        ERRLAV+RK   L  G
Subjt:  ERRLAVVRKKKKLVVG

KAA0040449.1 uncharacterized protein E6C27_scaffold35G00900 [Cucumis melo var. makuwa]6.2e-2777.78Show/hide
Query:  TVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQERRLAVVRKKKKLVVG
        +VA  TTTVV  AHPV A+T+VTLPFLRS LCLPPPSVVLFFDHVR QPSPP LHVRI L GSNLVCLW DMLQERRLAV+RK   L  G
Subjt:  TVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQERRLAVVRKKKKLVVG

KAG7021674.1 Isoamylase 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2194.34Show/hide
Query:  GGGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ
        GGGRKPWNSI+FICAHDGFTLADLVTYNSKHNLAN +DNNDGENHNNSWNCGQ
Subjt:  GGGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ

TYK27600.1 photosynthetic NDH subunit of subcomplex B 3 [Cucumis melo var. makuwa]2.9e-4081.9Show/hide
Query:  MTHTISSFQFLLLFSFSSHTLPFLLRTVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQ
        MTHTISSFQFLLLFSFSSH +PFLLRTVAA TTTVV  AH VPA+T+VTLPFLRS LCLPPPSV LFFDHVR+QPSPPPLHV I L GSNLVCLW DMLQ
Subjt:  MTHTISSFQFLLLFSFSSHTLPFLLRTVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQ

Query:  ERRLAVVRKKKKLVVG
        ERRLAV+RK   L  G
Subjt:  ERRLAVVRKKKKLVVG

XP_022973965.1 isoamylase 1, chloroplastic [Cucurbita maxima]1.8e-2194.34Show/hide
Query:  GGGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ
        GGGRKPWNSI+FICAHDGFTLADLVTYNSKHNLAN +DNNDGENHNNSWNCGQ
Subjt:  GGGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ

TrEMBL top hitse value%identityAlignment
A0A5A7T3Z2 Photosynthetic NDH subunit of subcomplex B 31.4e-4081.9Show/hide
Query:  MTHTISSFQFLLLFSFSSHTLPFLLRTVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQ
        MTHTISSFQFLLLFSFSSH +PFLLRTVAA TTTVV  AH VPA+T+VTLPFLRS LCLPPPSV LFFDHVR+QPSPPPLHV I L GSNLVCLW DMLQ
Subjt:  MTHTISSFQFLLLFSFSSHTLPFLLRTVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQ

Query:  ERRLAVVRKKKKLVVG
        ERRLAV+RK   L  G
Subjt:  ERRLAVVRKKKKLVVG

A0A5D3DWD6 Photosynthetic NDH subunit of subcomplex B 31.4e-4081.9Show/hide
Query:  MTHTISSFQFLLLFSFSSHTLPFLLRTVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQ
        MTHTISSFQFLLLFSFSSH +PFLLRTVAA TTTVV  AH VPA+T+VTLPFLRS LCLPPPSV LFFDHVR+QPSPPPLHV I L GSNLVCLW DMLQ
Subjt:  MTHTISSFQFLLLFSFSSHTLPFLLRTVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQ

Query:  ERRLAVVRKKKKLVVG
        ERRLAV+RK   L  G
Subjt:  ERRLAVVRKKKKLVVG

A0A5D3DYC4 Uncharacterized protein3.0e-2777.78Show/hide
Query:  TVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQERRLAVVRKKKKLVVG
        +VA  TTTVV  AHPV A+T+VTLPFLRS LCLPPPSVVLFFDHVR QPSPP LHVRI L GSNLVCLW DMLQERRLAV+RK   L  G
Subjt:  TVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQERRLAVVRKKKKLVVG

A0A6J1EW54 isoamylase 1, chloroplastic8.5e-2294.34Show/hide
Query:  GGGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ
        GGGRKPWNSI+FICAHDGFTLADLVTYNSKHNLAN +DNNDGENHNNSWNCGQ
Subjt:  GGGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ

A0A6J1ICQ3 isoamylase 1, chloroplastic8.5e-2294.34Show/hide
Query:  GGGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ
        GGGRKPWNSI+FICAHDGFTLADLVTYNSKHNLAN +DNNDGENHNNSWNCGQ
Subjt:  GGGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ

SwissProt top hitse value%identityAlignment
D0TZF0 Isoamylase 1, chloroplastic1.1e-1876.92Show/hide
Query:  GGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ
        GGRKPW+SI+F+CAHDGFTLADLVTYN K+N +N +DN DGENHN SWNCG+
Subjt:  GGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ

O04196 Isoamylase 1, chloroplastic3.4e-2082.69Show/hide
Query:  GGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ
        GGRKPW+SI+FICAHDGFTLADLVTYN+K+NLAN ++NNDGENHN SWNCG+
Subjt:  GGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ

P0A4Y5 Glycogen operon protein GlgX homolog1.5e-1266Show/hide
Query:  GRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCG
        GR+P  SI+F+ AHDGFTL DLV+YN KHN AN ++N DGE++N SWNCG
Subjt:  GRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCG

P9WQ24 Glycogen operon protein GlgX homolog1.5e-1266Show/hide
Query:  GRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCG
        GR+P  SI+F+ AHDGFTL DLV+YN KHN AN ++N DGE++N SWNCG
Subjt:  GRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCG

P9WQ25 Glycogen operon protein GlgX homolog1.5e-1266Show/hide
Query:  GRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCG
        GR+P  SI+F+ AHDGFTL DLV+YN KHN AN ++N DGE++N SWNCG
Subjt:  GRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCG

Arabidopsis top hitse value%identityAlignment
AT2G39930.1 isoamylase 12.4e-2182.69Show/hide
Query:  GGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ
        GGRKPW+SI+FICAHDGFTLADLVTYN+K+NLAN ++NNDGENHN SWNCG+
Subjt:  GGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQ

AT4G09020.1 isoamylase 39.3e-1363.27Show/hide
Query:  RKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCG
        RKP++ ++F+ AHDGFTL DLV+YN KHN AN +  NDG N N+SWNCG
Subjt:  RKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCG

AT4G38350.1 Patched family protein7.9e-0455.56Show/hide
Query:  VRKKKKLVVGCLTCLRNFLHWFYELAYSSNQSLVIN
        V++    +VGC  CLRNFL+ F EL+ S NQSL IN
Subjt:  VRKKKKLVVGCLTCLRNFLHWFYELAYSSNQSLVIN

AT4G38350.2 Patched family protein7.9e-0455.56Show/hide
Query:  VRKKKKLVVGCLTCLRNFLHWFYELAYSSNQSLVIN
        V++    +VGC  CLRNFL+ F EL+ S NQSL IN
Subjt:  VRKKKKLVVGCLTCLRNFLHWFYELAYSSNQSLVIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCACACAATTTCTTCCTTCCAATTTCTTCTTCTCTTCTCATTCTCATCTCACACTCTTCCCTTTCTTCTCCGAACAGTCGCCGCCACCACCACCACAGTCGTCCT
TTGTGCCCATCCCGTGCCCGCCACCACCATTGTCACTCTTCCCTTTCTTCGATCGTTTTTGTGCTTGCCACCACCGTCTGTAGTCCTTTTCTTCGACCACGTTCGTTCCC
AGCCCTCGCCACCACCGTTGCACGTCCGCATCTATCTCATAGGCTCAAATCTGGTCTGCTTGTGGCCAGATATGTTGCAAGAGCGCCGATTAGCTGTCGTCCGAAAGAAG
AAGAAGCTTGTTGTGGGTTGTCTAACATGCTTAAGGAACTTTTTGCACTGGTTCTATGAGCTTGCCTATTCTTCAAATCAGAGCTTAGTCATAAACGGAGGAGGAAGGAA
ACCATGGAATAGTATCGACTTTATTTGTGCACATGATGGTTTCACTTTGGCTGATTTAGTGACTTATAATAGTAAACATAATTTAGCAAATAGTAAAGACAACAATGATG
GTGAAAATCATAATAATAGCTGGAACTGTGGACAGTCACTCACAGATAGAATGGGTTTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGCATAGAGTGAAGCGG
TCGATTAAGGTGCCCACGATTGGTAACAAGCTACTAGGTATGTTG
mRNA sequenceShow/hide mRNA sequence
ATGACCCACACAATTTCTTCCTTCCAATTTCTTCTTCTCTTCTCATTCTCATCTCACACTCTTCCCTTTCTTCTCCGAACAGTCGCCGCCACCACCACCACAGTCGTCCT
TTGTGCCCATCCCGTGCCCGCCACCACCATTGTCACTCTTCCCTTTCTTCGATCGTTTTTGTGCTTGCCACCACCGTCTGTAGTCCTTTTCTTCGACCACGTTCGTTCCC
AGCCCTCGCCACCACCGTTGCACGTCCGCATCTATCTCATAGGCTCAAATCTGGTCTGCTTGTGGCCAGATATGTTGCAAGAGCGCCGATTAGCTGTCGTCCGAAAGAAG
AAGAAGCTTGTTGTGGGTTGTCTAACATGCTTAAGGAACTTTTTGCACTGGTTCTATGAGCTTGCCTATTCTTCAAATCAGAGCTTAGTCATAAACGGAGGAGGAAGGAA
ACCATGGAATAGTATCGACTTTATTTGTGCACATGATGGTTTCACTTTGGCTGATTTAGTGACTTATAATAGTAAACATAATTTAGCAAATAGTAAAGACAACAATGATG
GTGAAAATCATAATAATAGCTGGAACTGTGGACAGTCACTCACAGATAGAATGGGTTTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGCATAGAGTGAAGCGG
TCGATTAAGGTGCCCACGATTGGTAACAAGCTACTAGGTATGTTGA
Protein sequenceShow/hide protein sequence
MTHTISSFQFLLLFSFSSHTLPFLLRTVAATTTTVVLCAHPVPATTIVTLPFLRSFLCLPPPSVVLFFDHVRSQPSPPPLHVRIYLIGSNLVCLWPDMLQERRLAVVRKK
KKLVVGCLTCLRNFLHWFYELAYSSNQSLVINGGGRKPWNSIDFICAHDGFTLADLVTYNSKHNLANSKDNNDGENHNNSWNCGQSLTDRMGLGKGKAFNNTRVKHRVKR
SIKVPTIGNKLLGML