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MELO3C035140 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035140
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Genome locationchr11:23964095..23966058
RNA-Seq ExpressionMELO3C035140
SyntenyMELO3C035140
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025873.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-0853.09Show/hide
Query:  RPEQPNPTRVSSPQTEPELAPTPEP----------TPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY
        R +QP P+   S  T   L+PT             +P  +DCAVRRD QS IDIDMIRV+++DRSQPD LSVSSGYTTD +
Subjt:  RPEQPNPTRVSSPQTEPELAPTPEP----------TPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY

KAA0047164.1 hypothetical protein E6C27_scaffold83G00380 [Cucumis melo var. makuwa]4.0e-0878.57Show/hide
Query:  RDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY
        RDCAVRRD QS IDIDMI+V++ DRSQPD LSVSSGYTTD +
Subjt:  RDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY

KAA0051662.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.0e-0878.05Show/hide
Query:  DCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY
        DC VRRD QS IDIDMIRV+RRDRSQPD L+VSSGY TD +
Subjt:  DCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY

TYK22590.1 uncharacterized protein E5676_scaffold195G00070 [Cucumis melo var. makuwa]3.1e-0853.09Show/hide
Query:  RPEQPNPTRVSSPQTEPELAPTPEP----------TPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY
        R +QP P+   S  T   L+PT             +P  +DCAVRRD QS IDIDMIRV+++DRSQPD LSVSSGYTTD +
Subjt:  RPEQPNPTRVSSPQTEPELAPTPEP----------TPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY

TYK27687.1 hypothetical protein E5676_scaffold225G00160 [Cucumis melo var. makuwa]1.8e-0866.07Show/hide
Query:  EPELAPTPEPTPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY
        E  L   P  +P   DC VRRD QS IDID+IRV+RRDRSQPD LSVSSGYTTD +
Subjt:  EPELAPTPEPTPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY

TrEMBL top hitse value%identityAlignment
A0A5A7SMH1 Reverse transcriptase1.5e-0853.09Show/hide
Query:  RPEQPNPTRVSSPQTEPELAPTPEP----------TPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY
        R +QP P+   S  T   L+PT             +P  +DCAVRRD QS IDIDMIRV+++DRSQPD LSVSSGYTTD +
Subjt:  RPEQPNPTRVSSPQTEPELAPTPEP----------TPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY

A0A5D3BID6 Reverse transcriptase1.9e-0878.05Show/hide
Query:  DCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY
        DC VRRD QS IDIDMIRV+RRDRSQPD L+VSSGY TD +
Subjt:  DCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY

A0A5D3BQ28 Uncharacterized protein1.9e-0878.57Show/hide
Query:  RDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY
        RDCAVRRD QS IDIDMI+V++ DRSQPD LSVSSGYTTD +
Subjt:  RDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY

A0A5D3DGW7 Uncharacterized protein1.5e-0853.09Show/hide
Query:  RPEQPNPTRVSSPQTEPELAPTPEP----------TPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY
        R +QP P+   S  T   L+PT             +P  +DCAVRRD QS IDIDMIRV+++DRSQPD LSVSSGYTTD +
Subjt:  RPEQPNPTRVSSPQTEPELAPTPEP----------TPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY

A0A5D3DV76 Uncharacterized protein8.7e-0966.07Show/hide
Query:  EPELAPTPEPTPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY
        E  L   P  +P   DC VRRD QS IDID+IRV+RRDRSQPD LSVSSGYTTD +
Subjt:  EPELAPTPEPTPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTTCTCCGCAACCTGAACCGCACGCACTTTCGACCCGAACAGCCGAACCCGACCCGCGTCTCTTCTCCGCAAACCGAACCCGAACTCGCGCCTACACCCGAGCC
TACTCCAGCCGCCCGCGACTGCGCAGTCCGACGGGACCTCCAATCTCGCATTGACATAGACATGATTCGAGTGGTTCGACGGGATCGCTCGCAGCCCGATTATCTTAGTG
TTTCCTCCGGGTACACTACAGACGGGTACCCTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTTCTCCGCAACCTGAACCGCACGCACTTTCGACCCGAACAGCCGAACCCGACCCGCGTCTCTTCTCCGCAAACCGAACCCGAACTCGCGCCTACACCCGAGCC
TACTCCAGCCGCCCGCGACTGCGCAGTCCGACGGGACCTCCAATCTCGCATTGACATAGACATGATTCGAGTGGTTCGACGGGATCGCTCGCAGCCCGATTATCTTAGTG
TTTCCTCCGGGTACACTACAGACGGGTACCCTGCATAAACAGTCTAGTGGTTCCGTAGAACGCACACATCAGTTTCATGATCCCGAAGGATGCACGTATCAGTCTAGTGA
TCCCGAAGGATACACCAATCAGTCTAGTGATCCCGAAGGATGTACATATCAGTCTAGTGATCCCGGAGGATGTACATATCAGTCTAGTGATCCCGGAGGATGCACATATC
AGTCTAGTGATCCCGAAGGATACACATATCAGTAA
Protein sequenceShow/hide protein sequence
MPLLRNLNRTHFRPEQPNPTRVSSPQTEPELAPTPEPTPAARDCAVRRDLQSRIDIDMIRVVRRDRSQPDYLSVSSGYTTDGYPA