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MELO3C035157 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035157
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Genome locationchr01:17145134..17145615
RNA-Seq ExpressionMELO3C035157
SyntenyMELO3C035157
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045433.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.6e-5088.89Show/hide
Query:  MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQ
        ++  Y+ IVIMSYRRSNFMETDDMFLQFEEDL+NI GGSSSVGDNT GSSSQQTTPTPR+RAQSRLLELERH+AINGRIPMTIAPGAEKPISPH +RFSQ
Subjt:  MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQ

Query:  AIGVCVRKTFPVRCLKW
        AIGVCVRKTFPVRCLKW
Subjt:  AIGVCVRKTFPVRCLKW

KAA0046834.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.4e-5196.4Show/hide
Query:  MSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV
        M  VIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT SSSQQTTPTPR+RAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV
Subjt:  MSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV

Query:  RKTFPVRCLKW
        RKTFPVRCLKW
Subjt:  RKTFPVRCLKW

TYJ96549.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]9.8e-5093.69Show/hide
Query:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV
        ++ IMSYRRSNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLELERHVAINGRIPMTIAPGAEKPISPHA RFSQAIGVCV
Subjt:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV

Query:  RKTFPVRCLKW
        RKTFPVRCLKW
Subjt:  RKTFPVRCLKW

TYJ99698.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]8.9e-5195.5Show/hide
Query:  SIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV
        ++VIMSYRRS+FMETDDMFLQFEEDLDNIAGGSSSVGDNT GSSSQQTTPTPR+RAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV
Subjt:  SIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV

Query:  RKTFPVRCLKW
        RKTFPVRCLKW
Subjt:  RKTFPVRCLKW

TYK11476.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.7e-4996.3Show/hide
Query:  IMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKT
        IMSYR SNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKT
Subjt:  IMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKT

Query:  FPVRCLKW
        FPVRCLKW
Subjt:  FPVRCLKW

TrEMBL top hitse value%identityAlignment
A0A5A7TPH1 CACTA en-spm transposon protein1.2e-5088.89Show/hide
Query:  MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQ
        ++  Y+ IVIMSYRRSNFMETDDMFLQFEEDL+NI GGSSSVGDNT GSSSQQTTPTPR+RAQSRLLELERH+AINGRIPMTIAPGAEKPISPH +RFSQ
Subjt:  MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQ

Query:  AIGVCVRKTFPVRCLKW
        AIGVCVRKTFPVRCLKW
Subjt:  AIGVCVRKTFPVRCLKW

A0A5A7TUT1 CACTA en-spm transposon protein6.6e-5296.4Show/hide
Query:  MSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV
        M  VIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT SSSQQTTPTPR+RAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV
Subjt:  MSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV

Query:  RKTFPVRCLKW
        RKTFPVRCLKW
Subjt:  RKTFPVRCLKW

A0A5D3BBZ9 CACTA en-spm transposon protein4.7e-5093.69Show/hide
Query:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV
        ++ IMSYRRSNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLELERHVAINGRIPMTIAPGAEKPISPHA RFSQAIGVCV
Subjt:  SIVIMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV

Query:  RKTFPVRCLKW
        RKTFPVRCLKW
Subjt:  RKTFPVRCLKW

A0A5D3BNG3 CACTA en-spm transposon protein4.3e-5195.5Show/hide
Query:  SIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV
        ++VIMSYRRS+FMETDDMFLQFEEDLDNIAGGSSSVGDNT GSSSQQTTPTPR+RAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV
Subjt:  SIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNT-GSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV

Query:  RKTFPVRCLKW
        RKTFPVRCLKW
Subjt:  RKTFPVRCLKW

A0A5D3CM32 CACTA en-spm transposon protein8.1e-5096.3Show/hide
Query:  IMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKT
        IMSYR SNFMETDDMFLQFE+DLD NIAGGSSSVGDNTGSSSQQTTPTPR+RAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKT
Subjt:  IMSYRRSNFMETDDMFLQFEEDLD-NIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCVRKT

Query:  FPVRCLKW
        FPVRCLKW
Subjt:  FPVRCLKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTTTCTATATGTCCATAGTCATTATGTCATATCGACGATCAAATTTTATGGAGACGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATT
GCGGGAGGGTCGTCATCTGTAGGCGACAATACGGGGTCTTCTTCTCAACAAACGACTCCGACACCTAGGAAACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGC
CACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTTCTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGCGTGTGCGTG
CGAAAGACATTTCCCGTCCGCTGTCTTAAGTGG
mRNA sequenceShow/hide mRNA sequence
TTATATATTTTGATTCTAGCTATATGTTCGTATTTGGTTATTGAATGTTTGTTTTCTATATGTCCATAGTCATTATGTCATATCGACGATCAAATTTTATGGAGA
CGGACGATATGTTCCTCCAGTTTGAGGAGGATTTAGATAACATTGCGGGAGGGTCGTCATCTGTAGGCGACAATACGGGGTCTTCTTCTCAACAAACGACTCCGA
CACCTAGGAAACGTGCGCAGTCTCGACTCTTGGAGTTAGAGCGCCACGTTGCAATAAATGGGCGCATTCCGATGACGATCGCCCCTGGAGCGGAGAAGCCTATTT
CTCCACACGCCGTTCGCTTCAGCCAGGCGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGTCTTAAGTGG
Protein sequenceShow/hide protein sequence
MFVFYMSIVIMSYRRSNFMETDDMFLQFEEDLDNIAGGSSSVGDNTGSSSQQTTPTPRKRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGVCV
RKTFPVRCLKW