; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C035187 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035187
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRas-related protein Rab-2A
Genome locationchr11:27935461..27936596
RNA-Seq ExpressionMELO3C035187
SyntenyMELO3C035187
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0030100 - regulation of endocytosis (biological process)
GO:0005768 - endosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0003924 - GTPase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR59901.1 hypothetical protein CICLE_v10016688mg [Citrus clementina]2.3e-1572.41Show/hide
Query:  LLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        LLQAGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P++SIM+V
Subjt:  LLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

KDO49007.1 hypothetical protein CISIN_1g028251mg [Citrus sinensis]2.3e-1572.41Show/hide
Query:  LLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        LLQAGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P++SIM+V
Subjt:  LLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

MBA0870721.1 hypothetical protein [Gossypium schwendimanii]2.0e-1464.41Show/hide
Query:  VLLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        ++ QAGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P+++IM++
Subjt:  VLLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

RVW78616.1 Ras-related protein RABB1b [Vitis vinifera]2.0e-1463.33Show/hide
Query:  YVLLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        +++ QAGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P+++IM++
Subjt:  YVLLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

XP_008458689.1 PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-2A-like, partial [Cucumis melo]2.2e-2191.8Show/hide
Query:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVVEIRLIK
        AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV  ++ K
Subjt:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVVEIRLIK

TrEMBL top hitse value%identityAlignment
A0A067ECQ7 Uncharacterized protein1.1e-1572.41Show/hide
Query:  LLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        LLQAGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P++SIM+V
Subjt:  LLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

A0A1S3C8F9 LOW QUALITY PROTEIN: ras-related protein Rab-2A-like1.0e-2191.8Show/hide
Query:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVVEIRLIK
        AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV  ++ K
Subjt:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVVEIRLIK

A0A438H1V5 Ras-related protein RABB1b9.5e-1563.33Show/hide
Query:  YVLLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        +++ QAGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P+++IM++
Subjt:  YVLLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

A0A7J9MID0 Uncharacterized protein9.5e-1564.41Show/hide
Query:  VLLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        ++ QAGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P+++IM++
Subjt:  VLLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

V4UCB2 Uncharacterized protein1.1e-1572.41Show/hide
Query:  LLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        LLQAGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P++SIM+V
Subjt:  LLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

SwissProt top hitse value%identityAlignment
P36863 GTP-binding protein yptV43.7e-1658.82Show/hide
Query:  VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        +  K + LQ    AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P+++IM++
Subjt:  VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

P49103 Ras-related protein Rab-2-A2.4e-1567.27Show/hide
Query:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+ +++IM+V
Subjt:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

P49104 Ras-related protein Rab-2-B2.4e-1567.27Show/hide
Query:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+ +++IM+V
Subjt:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

Q38922 Ras-related protein RABB1b1.7e-1669.09Show/hide
Query:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P++SIM++
Subjt:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

Q39570 GTP-binding protein YPTC43.7e-1658.82Show/hide
Query:  VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        +  K + LQ    AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P+++IM++
Subjt:  VKSKYVLLQ----AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

Arabidopsis top hitse value%identityAlignment
AT1G73640.1 RAB GTPase homolog A6A3.2e-1552.17Show/hide
Query:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV----EIRLIKMVEE
        AGQE F++IT SYYRGA+GALL+YD+TRR TF N+K WL ++R+ A+P+  +++V    ++R  + VEE
Subjt:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV----EIRLIKMVEE

AT4G17160.1 RAB GTPase homolog B1A6.1e-1456.36Show/hide
Query:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        AGQE+F+S+TRSYYRG  G LLVYD+TRR+TF++L SWL++ R+ A  +++ M++
Subjt:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

AT4G17170.1 RAB GTPase homolog B1C2.2e-1665.45Show/hide
Query:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+ +++IM++
Subjt:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

AT4G35860.1 GTP-binding 21.2e-1769.09Show/hide
Query:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P++SIM++
Subjt:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV

AT4G35860.2 GTP-binding 21.2e-1769.09Show/hide
Query:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV
        AGQE+F+SITRSYYRGA GALLVYD+TRR+TF++L SWL+D R+ A+P++SIM++
Subjt:  AGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAAATCAAAATATGTATTATTGCAGGCCGGACAAGAGGCATTCAAATCAATTACAAGATCTTATTACAGAGGAGCAATCGGTGCACTTTTAGTTTATGAT
GTTACTAGGAGAAAGACATTCTCTAACTTGAAGAGTTGGTTGGATGATGTTAGAGAGCTTGCACATCCCGACATATCAATTATGGTGGTAGAAATAAGGTTGATA
AAAATGGTCGAAGAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAAATCAAAATATGTATTATTGCAGGCCGGACAAGAGGCATTCAAATCAATTACAAGATCTTATTACAGAGGAGCAATCGGTGCACTTTTAGTTTATGAT
GTTACTAGGAGAAAGACATTCTCTAACTTGAAGAGTTGGTTGGATGATGTTAGAGAGCTTGCACATCCCGACATATCAATTATGGTGGTAGAAATAAGGTTGATA
AAAATGGTCGAAGAGAAGTGACCAAAGAAAAAGAAGAAGGACAACATTTTGCGGAACAAAATGGACTCTGGTTTTTAGAGACATCCGCTAAAACAAGTCAAAATG
TCTATGAGCTGATCACCAATAGTGTTGTTCTACAGCCTTTCTCAATAATTGCAAATAACATACTTGACAAGATTGAGCTTGGTGTCCTTGATTTATCCAATAAGT
TAAAATGGATATCACATCTGGAATCAAGGTCGGGCTACGGCCTTGCGTTGAAGGTTCATCCATGGCAACGGAATCAGTAG
Protein sequenceShow/hide protein sequence
MVKSKYVLLQAGQEAFKSITRSYYRGAIGALLVYDVTRRKTFSNLKSWLDDVRELAHPDISIMVVEIRLIKMVEEK