CuGenDBv2

Gene ID	MELO3C035190
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	condensin-2 complex subunit D3
Genome location	chr11:28034031..28036360
RNA-Seq Expression	MELO3C035190
Synteny	MELO3C035190
Gene Ontology terms	GO:0007076 - mitotic chromosome condensation (biological process) GO:0009556 - microsporogenesis (biological process) GO:0010032 - meiotic chromosome condensation (biological process) GO:0098653 - centromere clustering (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR016024 - Armadillo-type fold IPR026971 - Condensin subunit 1/Condensin-2 complex subunit D3 IPR032682 - Condensin complex subunit 1, C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8637200.1 hypothetical protein CSA_019088 [Cucumis sativus]

3.2e-197

93.12

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Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
        ++ YLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSF+EAIYVLND RAHSGHSDS
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS

Query:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV
        KASRAESR FSIRGNDERSRSRRM IYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDD TARSVL           QDTF+ILACKEIRLSINRV
Subjt:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV

Query:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK
        SSSESGDV EEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQ+YE TK
Subjt:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK

Query:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
        AKSAVAEAVNEM KSTNYLSPEAPPQA S++NNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
Subjt:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE

Query:  SLRKHQN
        SLRKHQ+
Subjt:  SLRKHQN

KAE8637533.1 hypothetical protein CSA_022907 [Cucumis sativus]

3.2e-197

93.12

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Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
        ++ YLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSF+EAIYVLND RAHSGHSDS
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS

Query:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV
        KASRAESR FSIRGNDERSRSRRM IYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDD TARSVL           QDTF+ILACKEIRLSINRV
Subjt:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV

Query:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK
        SSSESGDV EEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQ+YE TK
Subjt:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK

Query:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
        AKSAVAEAVNEM KSTNYLSPEAPPQA S++NNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
Subjt:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE

Query:  SLRKHQN
        SLRKHQ+
Subjt:  SLRKHQN

KAG7013645.1 Condensin-2 complex subunit D3 [Cucurbita argyrosperma subsp. argyrosperma]

5.1e-187

87.47

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Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
        ++ YLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLAD+LFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGH+DS
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS

Query:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV
        KASRAESRLFSIRGNDE SR +RMHIYVSLLKQMAPEHLLATFAKLC+E+L  ASDG L++DD TARSVL           QDTFDILACKEIRLSINR 
Subjt:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV

Query:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK
        SSSESGDVDEEGGESGGASAARGKVITH VRKSLIQN++PIF ELKRLMESKNSPLIGSLMECLRVL+KDYKN+IDD+LVADKQLQKEL+YDIQKYE+TK
Subjt:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK

Query:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
        AKSA AEAVNEM KSTNYLSPEAPP   + IN LTSKLQ DS+VASAIAD AAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
Subjt:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE

Query:  SLRKHQN
        S+RK Q+
Subjt:  SLRKHQN

XP_008458433.1 PREDICTED: condensin-2 complex subunit D3 [Cucumis melo]

2.4e-205

96.31

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Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
        ++ YLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS

Query:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV
        KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVL           QDTFDILACKEIRLSINRV
Subjt:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV

Query:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK
        SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK
Subjt:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK

Query:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
        AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
Subjt:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE

Query:  SLRKHQN
        SLRKHQ+
Subjt:  SLRKHQN

XP_038874590.1 condensin-2 complex subunit D3 isoform X1 [Benincasa hispida]

3.4e-191

90.42

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Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
        ++ YLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLA +LFGNILKVKAPLLAYNSFVEAIYVLNDC AHSGHSDS
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS

Query:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV
         ASRAESRLFSIRGNDERSRS+RMHIYVSLLKQMAPEHLLATFAKLCAE+LVAASDGMLNIDD TARSVL           QDTFDILACKEIRLS+NRV
Subjt:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV

Query:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK
        SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK
Subjt:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK

Query:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
        AKSA AEAVNEM KSTN+LSPEAP +A S IN +TSKLQNDSKVASAIADAAAAATAKSVLREVNRG STPP GSLSLP LKS TGGNNGTN+S LNVIE
Subjt:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE

Query:  SLRKHQN
        SLRK Q+
Subjt:  SLRKHQN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C933 condensin-2 complex subunit D3

1.2e-205

96.31

Show/hide

Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
        ++ YLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS

Query:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV
        KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVL           QDTFDILACKEIRLSINRV
Subjt:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV

Query:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK
        SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK
Subjt:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK

Query:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
        AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
Subjt:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE

Query:  SLRKHQN
        SLRKHQ+
Subjt:  SLRKHQN

A0A2N9IBH7 Cnd1 domain-containing protein

6.7e-153

73.72

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Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
        ++ Y+ KITKCL DPCELVRR TFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFG+ILKVKAPLLAYNSFVEAI++LNDC AH+GH+DS
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS

Query:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV
        + SR ES+LFSIRGNDE SRS+RMHIYVSLLKQMAPEHLLATFAKLCAE+L AASDGML+I+D T +SVL           QD F ILACKEIR+  NR 
Subjt:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV

Query:  SSSESGDVDEEGGESGGAS--AARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYES
        SSS+S D+DEE G+SGGAS  AARG+VIT AVRK LIQNTIPIFIELKRL+ESKNSPLIGSLMECLR++LKDYKNEIDD+LVADKQLQKEL+YD+QKY+S
Subjt:  SSSESGDVDEEGGESGGAS--AARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYES

Query:  TKAKSAVAEAVNEMHKSTNYLSPEAPPQAG--SIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRL
        TKAKS VAEAV +M KS++  SP     A      N LT+K +N SK+ASA+AD AAAATA+SVLREVN+G STPPLGSLS+PKLKS  G +       L
Subjt:  TKAKSAVAEAVNEMHKSTNYLSPEAPPQAG--SIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRL

Query:  NVIESLRKHQN
        NV++SL K  +
Subjt:  NVIESLRKHQN

A0A6J1CAM9 condensin-2 complex subunit D3

1.4e-174

82.96

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Query:  LTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDSKASR
        L KITKCLRDPCELVRRHTFILLSRLLQRDYVKWRG+LFLRFLLSLVDESEKIRQLAD+LFGNILKVKAPLLAYNSFVEAIY+LNDCRAHSGH+DSKASR
Subjt:  LTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDSKASR

Query:  AESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRVSSSE
        AESRLFSIRGNDERSRS+RMHIYVSLLKQMAPEHLLATFAKLCAE+L AASDGMLNIDDATA+SVL           QDTF ILACKEIR+S+NR SSSE
Subjt:  AESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRVSSSE

Query:  SGDVDEEGGESGGASA--ARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTKAK
        S D DEEGG+SG ASA  ARG+ IT AV++SLI NT+PIFIELKRL+ESKNSPLIGSLMECLRVLLKDYKNEIDD+LVADKQLQKELLYDIQKYE+ KAK
Subjt:  SGDVDEEGGESGGASA--ARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTKAK

Query:  SAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIESL
        S VAEAVNEM KST+YLSPE PP A S +N L  KL+ DSKVASAIADAAAAATA++VL EVN+G  TPPL SLSLPKLKSRTGGNN  N   L+VIESL
Subjt:  SAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIESL

Query:  RKHQN
        RK Q+
Subjt:  RKHQN

A0A6J1H4Z7 condensin-2 complex subunit D3

7.4e-184

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Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
        ++ YLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFL SLVDESEKIRQLAD+LFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGH+DS
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS

Query:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV
        KASRAESRLFSIRGNDE SR +RMHIYVSLLKQM+PEHLLATFAKLC+E+L  ASDG L++DD TARSVL           QDTFDILACKEIRLSINR 
Subjt:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV

Query:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK
        SSSESGDVDEEGGESGGASAARGKVITH VRKSLIQN++PIF ELKRLMESKNSPLIGSLMECL VLLKDYKN+IDD+LVADKQLQKEL+YDIQKYE+TK
Subjt:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK

Query:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
        AKSA A AVNEM KSTNY+SPEAPP   + I+ LTSKLQ DS+VASAIAD AAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNG NTSRLNVIE
Subjt:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE

Query:  SLRKHQN
        S+RK Q+
Subjt:  SLRKHQN

A0A6J1L4I0 condensin-2 complex subunit D3

4.8e-183

86.24

Show/hide

Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
        ++ YLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLAD+LFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGH+DS
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS

Query:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV
        KASRAESRLFSIRGNDE SR RRMHIYVSLLKQMAP HLLATFAKLC+E+L  ASDG L++DD TARSVL           QDTFDILACKEIRLSINR 
Subjt:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV

Query:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK
        SSSESGDVDEEGGESGG SAARGKVITH VRK LIQN+IPIF ELKRLMESKNSPLIGSLMECL VLLKDYKN+IDD+LVADKQLQKEL+YDIQKYE+TK
Subjt:  SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTK

Query:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE
        AKSA AEAVNEM KS NYLSPEAPP   + IN LTSKLQ DS+VASAIAD  AAATAKSVLREVNRGTSTPPLGSLSLPKLKS TGGNNG NTSRLNVIE
Subjt:  AKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIE

Query:  SLRKHQN
        S+RK Q+
Subjt:  SLRKHQN

SwissProt top hits

e value

%identity

Alignment

P42695 Condensin-2 complex subunit D3

4.8e-39

32.67

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Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
        ++ Y+  I+ CL+D    +R+ T ILL+ LLQ ++VKW+G LF RF+ +L+D    I    ++   ++L  + P++ +  F+E I+  N+   H  ++  
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS

Query:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNID-DATARSVLQNLISFPWLKAQDTFDILACKEIRLSINR
          S  E RLFS++G  + ++ RRM IY  LL+    E      +K+C  +L   +DG+L +D DA+       L+S       DTF++L+ KEI+L   R
Subjt:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNID-DATARSVLQNLISFPWLKAQDTFDILACKEIRLSINR

Query:  VSSSESGDVDEEGGESGGA--SAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYE
            +   ++E+           A+ K+I+   +++ I+N IPI I LK ++E    P +  LM  LR +++DY++E+ D    DKQL  EL YD++KY+
Subjt:  VSSSESGDVDEEGGESGGA--SAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYE

Q6ZQK0 Condensin-2 complex subunit D3

9.1e-38

30.73

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Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS
        +++Y+  I+ CL+D    +R+ T +LL+ LLQ +YVKW+G LF RF+ +LVD    I  L ++   ++L  + P + +  F+E I+  N    H  ++  
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHSDS

Query:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV
          S    +LF ++G  + ++ +RM IY  LL+    E      +K+C  +L   +DG+L +D   +  +             DTFDIL  KEI+L   R 
Subjt:  KASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV

Query:  SSSES-GDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYEST
         +S+   + D+    +     A+ K+I+   +++ I+N IPI I LK ++E    P +  LM  LR +++DY++EI+D    DKQL  EL YD++KY   
Subjt:  SSSES-GDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYEST

Query:  KAKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATA
         A+    +A+ E   +T    PE   +  S      +++  D +   A+A A  AA A
Subjt:  KAKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATA

Arabidopsis top hits

e value

%identity

Alignment

AT4G15890.1 binding

5.7e-136

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Query:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHS--
        +  Y+ KITK LRDPCE+VRR TFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIR+LAD+LFG+ILKVKAPLLAYNSFVEAIYVLNDC AH+GHS  
Subjt:  LNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLNDCRAHSGHS--

Query:  DSKASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSIN
        DSK SR + ++FSIRGNDER+RS+RM IYV+LLKQMAPEHLLATFAKLCAE+L AASDGMLNI+D T +SVL           QD F ILACKEIRLS++
Subjt:  DSKASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSIN

Query:  RVSSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYES
        R +SSE+ D++EEGG+   A+ A+G+ ITHAVRK LIQNTIPIFIELKRL+ESKNSPL GSLM+CLRVLLKDYKNEI+++LVADKQLQKEL+YD+QK+E+
Subjt:  RVSSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYES

Query:  TKAKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNV
         KA+S   + V      T++ + E    A S  N   S L  +S+V SA AD  AA  A+SVLREVN G +TPPL ++S+PKL+S  G +     S  +V
Subjt:  TKAKSAVAEAVNEMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNV

Query:  IESLRK
        +ESLR+
Subjt:  IESLRK

Sequences

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CDS sequence

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ATGGCAGAGAAAGAGAATCTCTTTAAGCTAGTTCCTCGTTACAATCAGACTAACTCTGAATTGAACAGCTACCTTACTAAAATCACAAAGTGCCTTCGCGATCCTTGTGA
ACTTGTCAGAAGACACACATTCATACTTCTATCCAGATTACTACAGAGAGACTATGTGAAATGGAGAGGGGTTTTGTTTCTTCGGTTTCTCTTGTCACTTGTTGATGAAT
CGGAGAAGATTCGTCAACTAGCAGATTACCTTTTTGGTAACATTTTAAAAGTGAAGGCCCCACTTTTGGCTTACAACAGTTTCGTAGAAGCAATTTATGTTTTGAATGAC
TGTCGTGCTCATTCTGGACATAGTGATTCGAAGGCATCACGAGCTGAAAGTCGACTATTCTCCATCCGAGGCAATGATGAAAGGTCGAGGTCCAGGAGAATGCACATTTA
TGTTTCTCTTCTGAAACAAATGGCTCCCGAGCATCTTCTGGCTACCTTTGCAAAGTTATGTGCAGAAGTTCTTGTTGCAGCATCAGATGGTATGCTCAATATAGATGATG
CCACTGCACGTTCTGTTTTACAGAATCTCATTAGTTTCCCATGGCTGAAAGCGCAGGATACCTTTGATATTCTTGCTTGTAAAGAGATTCGACTATCAATAAATCGAGTA
TCATCATCAGAATCTGGTGATGTAGATGAGGAAGGGGGCGAGAGTGGAGGAGCGTCTGCTGCTAGAGGAAAGGTCATCACTCACGCAGTGAGAAAGAGTCTCATACAAAA
CACCATACCCATCTTCATTGAGTTAAAAAGACTAATGGAAAGCAAGAATAGCCCCCTTATAGGTTCACTCATGGAATGCCTTCGAGTTCTTCTCAAGGACTACAAGAACG
AAATTGATGACTTATTGGTAGCTGATAAGCAACTTCAGAAAGAGCTCCTCTATGACATTCAAAAATATGAATCTACCAAAGCCAAGTCAGCCGTTGCCGAGGCAGTCAAC
GAGATGCACAAGTCAACTAACTATCTTTCTCCTGAGGCTCCTCCTCAAGCTGGAAGCATTATTAACAACCTAACCTCAAAACTTCAAAATGATTCGAAAGTTGCTTCAGC
CATTGCTGATGCAGCTGCTGCAGCCACAGCAAAATCTGTGCTTAGAGAAGTGAACAGAGGGACTTCGACACCGCCTCTTGGTTCTCTAAGTTTGCCTAAACTCAAGTCTC
GTACTGGTGGAAACAATGGCACAAATACCTCACGTTTGAATGTGATTGAATCTTTGAGAAAACACCAAAACCATGGTGGCCTTAAAGGTAGGAGTTCAACTATTGTTTCT
GCATCTGGTTCATCTGGA

mRNA sequence

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Protein sequence

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MAEKENLFKLVPRYNQTNSELNSYLTKITKCLRDPCELVRRHTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADYLFGNILKVKAPLLAYNSFVEAIYVLND
CRAHSGHSDSKASRAESRLFSIRGNDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEVLVAASDGMLNIDDATARSVLQNLISFPWLKAQDTFDILACKEIRLSINRV
SSSESGDVDEEGGESGGASAARGKVITHAVRKSLIQNTIPIFIELKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKELLYDIQKYESTKAKSAVAEAVN
EMHKSTNYLSPEAPPQAGSIINNLTSKLQNDSKVASAIADAAAAATAKSVLREVNRGTSTPPLGSLSLPKLKSRTGGNNGTNTSRLNVIESLRKHQNHGGLKGRSSTIVS
ASGSSG

MELO3C035190 (gene) of Melon (DHL92) v4 genome