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MELO3C035205 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035205
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:28872343..28873140
RNA-Seq ExpressionMELO3C035205
SyntenyMELO3C035205
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-6370.72Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLV+L+QFEPL+DATSLL Q++KDADV+FT  ML +I S+ SP+FVATLQ+S RLFTN+SVDH  SSKVSL+ FHDAMLDGGSFSSM+IH+L++  QM+
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
        LR+E PS + PPLH EL LSPPQAE+LGQVEYG FFTV S+ LR+IIKELPLFH D V V  T ++VKFSI SKEI +TKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

TYK02993.1 uncharacterized protein E5676_scaffold46G00820 [Cucumis melo var. makuwa]1.6e-7587.29Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGG                 
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
              SHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]8.6e-93100Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
        LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

XP_016903187.1 PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]1.4e-5560.22Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRL+ F+PL DATS LAQ+A++AD+KFTPL   II SNRSP+FVA LQ++   F N+ VD++ +S++SL+ FHDA+LDGG+  SMTIHLL    Q++
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
        LRFE+ SH  P +HHEL+L+P Q E+LG+V+Y  FF++ S++LRR+I+ LP+FH D++ VT TGSQVKFSI SKEI+LTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

XP_031743987.1 uncharacterized protein LOC116404759 [Cucumis sativus]3.2e-5565.05Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVA-KDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQM
        MFLV+L  F+PL+DATS  AQ++  DADVKFTP    II S+RSP+F+ATLQLS + FT+FSVDH+ SSKVSL+ FHDA+LDGGSF+SMTIHLLD TNQ+
Subjt:  MFLVRLEQFEPLIDATSLLAQVA-KDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQ--VEYGNFFTVTSRELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTK
        +LRF+TPS ++ PLHHELALSPPQAE+  +GQ  ++ G +F V S+ LRRIIKELP+F  D+ V V VT S+VKFSI SKEI+L +
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQ--VEYGNFFTVTSRELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTK

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980104.1e-93100Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
        LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

A0A1S3CL88 uncharacterized protein LOC1035022505.9e-5565.05Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQM
        MFLV+L+ F+PL+DATS LAQ++ D AD+KFTP    II S+RSP+F+ATLQLS + FT FSVD++ SSKVSL+ FHDA+LDGGSF+SMTIHLLD TNQM
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSRELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTK
        +LRF+TPS ++ PLHHEL LSPPQAE+  +GQ E     +F V S+ LRRIIK+LP+F  D+ +SV VT S+VKFSI SKEIILT+
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSRELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTK

A0A1S4E4N8 uncharacterized protein LOC1035022636.9e-5660.22Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRL+ F+PL DATS LAQ+A++AD+KFTPL   II SNRSP+FVA LQ++   F N+ VD++ +S++SL+ FHDA+LDGG+  SMTIHLL    Q++
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
        LRFE+ SH  P +HHEL+L+P Q E+LG+V+Y  FF++ S++LRR+I+ LP+FH D++ VT TGSQVKFSI SKEI+LTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

A0A5D3BTK3 Uncharacterized protein7.9e-7687.29Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGG                 
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
              SHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein5.9e-5565.05Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQM
        MFLV+L+ F+PL+DATS LAQ++ D AD+KFTP    II S+RSP+F+ATLQLS + FT FSVD++ SSKVSL+ FHDA+LDGGSF+SMTIHLLD TNQM
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSRELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTK
        +LRF+TPS ++ PLHHEL LSPPQAE+  +GQ E     +F V S+ LRRIIK+LP+F  D+ +SV VT S+VKFSI SKEIILT+
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSRELRRIIKELPLFHQDT-VSVTVTGSQVKFSIQSKEIILTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTAGTAAGGCTTGAGCAATTTGAACCTCTCATTGATGCAACCTCCCTGTTGGCTCAAGTTGCCAAGGATGCCGACGTGAAATTCACACCATTGATGCTCATGAT
AATCGTATCGAACCGTTCCCCTCAGTTCGTTGCAACGTTGCAATTGTCGCGACGATTGTTCACCAACTTTTCTGTCGATCATAATAAAAGCTCCAAGGTTTCCCTTCAAC
CTTTCCATGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGACTATCCATCTTTTGGATACAACAAACCAAATGGTTCTTAGATTTGAGACTCCAAGTCATGATGTG
CCACCATTGCATCATGAATTGGCATTGTCACCTCCCCAAGCAGAGAATTTAGGGCAAGTTGAATATGGAAACTTTTTCACAGTTACTTCTAGAGAGCTGAGAAGGATCAT
AAAAGAATTACCTCTCTTCCATCAAGATACTGTTAGTGTTACTGTAACTGGTTCTCAAGTCAAGTTCTCTATTCAATCTAAGGAGATTATACTTACCAAAGAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTAGTAAGGCTTGAGCAATTTGAACCTCTCATTGATGCAACCTCCCTGTTGGCTCAAGTTGCCAAGGATGCCGACGTGAAATTCACACCATTGATGCTCATGAT
AATCGTATCGAACCGTTCCCCTCAGTTCGTTGCAACGTTGCAATTGTCGCGACGATTGTTCACCAACTTTTCTGTCGATCATAATAAAAGCTCCAAGGTTTCCCTTCAAC
CTTTCCATGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGACTATCCATCTTTTGGATACAACAAACCAAATGGTTCTTAGATTTGAGACTCCAAGTCATGATGTG
CCACCATTGCATCATGAATTGGCATTGTCACCTCCCCAAGCAGAGAATTTAGGGCAAGTTGAATATGGAAACTTTTTCACAGTTACTTCTAGAGAGCTGAGAAGGATCAT
AAAAGAATTACCTCTCTTCCATCAAGATACTGTTAGTGTTACTGTAACTGGTTCTCAAGTCAAGTTCTCTATTCAATCTAAGGAGATTATACTTACCAAAGAG
Protein sequenceShow/hide protein sequence
MFLVRLEQFEPLIDATSLLAQVAKDADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTNFSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSHDV
PPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE