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MELO3C035207 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035207
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:28887496..28888552
RNA-Seq ExpressionMELO3C035207
SyntenyMELO3C035207
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575236.1 hypothetical protein SDJN03_25875, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2542.62Show/hide
Query:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD
        M FF L Q H   EA+ V+   ++  + LKFS    SIM +ASP + CII++QL P  F+TY C  LH+ ++        M +    GFSSL FSF   +
Subjt:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD

Query:  PHDT--YGCHMIKTV--RLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEIILTQESIR
          +    G   ++     L PS+   D+G +D+ TFV++ES+EFINII  F  +  VLVTL+SSQVKFSY R + I+T+ES R
Subjt:  PHDT--YGCHMIKTV--RLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEIILTQESIR

XP_008458680.1 PREDICTED: uncharacterized protein LOC103498008 [Cucumis melo]1.1e-7792.12Show/hide
Query:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD
        MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD
Subjt:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD

Query:  PHDTY-------------GCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDN
        PHDTY             GCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDN
Subjt:  PHDTY-------------GCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDN

XP_022958855.1 uncharacterized protein LOC111460009 [Cucurbita moschata]4.8e-3846.57Show/hide
Query:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----
        +H  ++A SVL ET +D FD+KFSP +FSIM A +PSS CII LQLSPQ F  Y+C  LH+KF++   F D M   +  GFSSL F+F E D  D+    
Subjt:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----

Query:  ----------YGC---------------------HMIKT-VRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEII
                  Y C                     H  +  + ++PS + +DVG FD GTFVSI+SQEFINI+  F DFD VLVTL +SQV FSYG+T+I+
Subjt:  ----------YGC---------------------HMIKT-VRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEII

Query:  LTQE
        LT+E
Subjt:  LTQE

XP_023006011.1 uncharacterized protein LOC111498888 [Cucurbita maxima]8.0e-4149.02Show/hide
Query:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----
        +H  ++A SVL ET +D FD+KFSP +FSIM A +PSSRCII+LQLSPQ F  Y+C  LH+KF++  +F D M   +  GFSSL F+F E D  D+    
Subjt:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----

Query:  ----------YGC---------------------HMIKT-VRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEII
                  Y C                     H  +  + ++PSS+ +DVG FDFGTFVSI+SQEFINI+  F DFD VLVTL++SQV FSYG+T+II
Subjt:  ----------YGC---------------------HMIKT-VRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEII

Query:  LTQE
        LTQE
Subjt:  LTQE

XP_023548336.1 uncharacterized protein LOC111807004 [Cucurbita pepo subsp. pepo]3.0e-4048.53Show/hide
Query:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----
        +H  ++A SVL ET +D FD+KFSP +FSIM A +PSSRCII+LQLSPQ F  Y+C  LH+KF++   F D M   +  GFSSL F+F E D  D+    
Subjt:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----

Query:  ----------YGC---------------------HMIKT-VRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEII
                  Y C                     H  +  + ++PSS+ +DVG FDFGTFVSI+SQEFINI+  F DFD VLVTL +SQV FSYG+T+I+
Subjt:  ----------YGC---------------------HMIKT-VRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEII

Query:  LTQE
        LTQE
Subjt:  LTQE

TrEMBL top hitse value%identityAlignment
A0A1S3C9N3 uncharacterized protein LOC1034980085.1e-7892.12Show/hide
Query:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD
        MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD
Subjt:  MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQD

Query:  PHDTY-------------GCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDN
        PHDTY             GCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDN
Subjt:  PHDTY-------------GCHMIKTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDN

A0A6J1H4N0 uncharacterized protein LOC1114600092.3e-3846.57Show/hide
Query:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----
        +H  ++A SVL ET +D FD+KFSP +FSIM A +PSS CII LQLSPQ F  Y+C  LH+KF++   F D M   +  GFSSL F+F E D  D+    
Subjt:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----

Query:  ----------YGC---------------------HMIKT-VRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEII
                  Y C                     H  +  + ++PS + +DVG FD GTFVSI+SQEFINI+  F DFD VLVTL +SQV FSYG+T+I+
Subjt:  ----------YGC---------------------HMIKT-VRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEII

Query:  LTQE
        LT+E
Subjt:  LTQE

A0A6J1H678 uncharacterized protein LOC1114603981.3e-2044.22Show/hide
Query:  SIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT--YGCHMIKTV--RLYPSSEKIDVGEFDFGTF
        SIM +ASP + CII++QL P  F+TY C  LH+ ++        M +    GFSSL FSF   +  +    G   ++     L PS+   D+G +D+ TF
Subjt:  SIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT--YGCHMIKTV--RLYPSSEKIDVGEFDFGTF

Query:  VSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEIILTQESIR
        V++ES+EFINII  F  +  VLVTL+SSQVKFSY R + I+T+ES R
Subjt:  VSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEIILTQESIR

A0A6J1KWL1 uncharacterized protein LOC1114988883.8e-4149.02Show/hide
Query:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----
        +H  ++A SVL ET +D FD+KFSP +FSIM A +PSSRCII+LQLSPQ F  Y+C  LH+KF++  +F D M   +  GFSSL F+F E D  D+    
Subjt:  IHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDT----

Query:  ----------YGC---------------------HMIKT-VRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEII
                  Y C                     H  +  + ++PSS+ +DVG FDFGTFVSI+SQEFINI+  F DFD VLVTL++SQV FSYG+T+II
Subjt:  ----------YGC---------------------HMIKT-VRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEII

Query:  LTQE
        LTQE
Subjt:  LTQE

A0A6J1KYD4 uncharacterized protein LOC1114993193.2e-1942.86Show/hide
Query:  SIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDTY--GCHMIK--TVRLYPSSEKIDVGEFDFGTF
        SIM +ASP + CII++QL P  F+ Y C  LH+ ++        M +    GFSSL FSF   +  +    G   ++     L P     D+G +D+ TF
Subjt:  SIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDTY--GCHMIK--TVRLYPSSEKIDVGEFDFGTF

Query:  VSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEIILTQESIR
        V++ES+EFINII  F  +  VLVTL+SSQVKFSY R + I+T+ES R
Subjt:  VSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEIILTQESIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTTTTTGAGCTTCCCCAAATCCATGGCTTCCTCGAAGCCATTTCCGTCCTTACCGAGACATCCGAGGATGAGTTTGATCTCAAATTCTCACCGGCAATATTCTC
GATAATGGTCGCTGCATCACCTTCCTCTCGTTGCATCATTTCCCTACAATTATCCCCTCAAATCTTTAGGACATATGTCTGCCCAACACTTCACCATAAATTCCTTTTCT
TCCGAGCCTTTTGTGATACCATGCAAGAATGCCAAAGTACAGGCTTTTCTTCATTGATTTTCAGTTTTCAAGAACAAGATCCCCACGATACGTATGGTTGTCATATGATA
AAAACTGTTCGATTGTACCCTTCTTCTGAAAAGATAGATGTGGGTGAATTTGATTTTGGAACTTTTGTGTCAATTGAATCACAAGAATTCATAAATATTATCAAACGGTT
TGTTGATTTTGATAATGTTCTTGTTACTCTATCAAGTTCACAAGTCAAATTCTCTTATGGAAGGACAGAGATTATTCTAACTCAAGAGAGTATTAGAACGCGACGGGGTG
ATAAGGAAGTGACAATCTAA
mRNA sequenceShow/hide mRNA sequence
GATTCATTTCTCCCATTTCCGATGATCTTTTTTGAGCTTCCCCAAATCCATGGCTTCCTCGAAGCCATTTCCGTCCTTACCGAGACATCCGAGGATGAGTTTGATCTCAA
ATTCTCACCGGCAATATTCTCGATAATGGTCGCTGCATCACCTTCCTCTCGTTGCATCATTTCCCTACAATTATCCCCTCAAATCTTTAGGACATATGTCTGCCCAACAC
TTCACCATAAATTCCTTTTCTTCCGAGCCTTTTGTGATACCATGCAAGAATGCCAAAGTACAGGCTTTTCTTCATTGATTTTCAGTTTTCAAGAACAAGATCCCCACGAT
ACGTATGGTTGTCATATGATAAAAACTGTTCGATTGTACCCTTCTTCTGAAAAGATAGATGTGGGTGAATTTGATTTTGGAACTTTTGTGTCAATTGAATCACAAGAATT
CATAAATATTATCAAACGGTTTGTTGATTTTGATAATGTTCTTGTTACTCTATCAAGTTCACAAGTCAAATTCTCTTATGGAAGGACAGAGATTATTCTAACTCAAGAGA
GTATTAGAACGCGACGGGGTGATAAGGAAGTGACAATCTAA
Protein sequenceShow/hide protein sequence
MIFFELPQIHGFLEAISVLTETSEDEFDLKFSPAIFSIMVAASPSSRCIISLQLSPQIFRTYVCPTLHHKFLFFRAFCDTMQECQSTGFSSLIFSFQEQDPHDTYGCHMI
KTVRLYPSSEKIDVGEFDFGTFVSIESQEFINIIKRFVDFDNVLVTLSSSQVKFSYGRTEIILTQESIRTRRGDKEVTI