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MELO3C035208 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035208
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:28874458..28876216
RNA-Seq ExpressionMELO3C035208
SyntenyMELO3C035208
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.2e-8072.77Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKL  F+PLLD+TS+LAQ S DNAD+KF P K F+I  +RSPRF ATLQLSP+WF+ +SVD+ HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV
         LRFDTPSS+IQP HHELTLSPPQ+ED QI +HELD  K+ IVKSK+LRR+IK+LPIF NDSII V VT S++KFSIASK I+L+ EG+HCKIEGF  EV
Subjt:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV

Query:  ESQFRINLCPMLF
        E+QF+I LCPM++
Subjt:  ESQFRINLCPMLF

TYK02994.1 uncharacterized protein E5676_scaffold46G00830 [Cucumis melo var. makuwa]3.3e-98100Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEE
        FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEE
Subjt:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEE

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]2.2e-10274.31Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKL  F+PLLD+TS+LAQ S DNAD+KF P K F+I  +RSPRF ATLQLSP+WF+ +SVD+ HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV
         LRFDTPSS+IQP HHELTLSPPQ+ED QI +HELD  K+ IVKSK+LRR+IK+LPIF NDSII V VT S++KFSIASK I+L+ EG+HCKIEGF  EV
Subjt:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV

Query:  ESQFRINLCPMLFFLNFTYKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFP
        E+QF+I LCPM+FFLNFTYKA+++WFYKTKNNAYT+M+VPA+GI+GQY IYFP
Subjt:  ESQFRINLCPMLFFLNFTYKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFP

XP_031743957.1 uncharacterized protein LOC116404737 [Cucumis sativus]1.2e-11383.53Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLTEFEPLLDST +LA YSN+NA +KF PGKLFLIV NR P F ATLQLSPRWF+N+SVDHVHSSKVSLESFHDAMLDGG+FS+MSIHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV
         LRFDTPSSQIQP H ELTLSPPQSED +I +HEL+L KF IV SKSLRRVIKELPIF NDSIICV VT SQIKFSIAS  IV S EG HC+IEGF  EV
Subjt:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV

Query:  ESQFRINLCPMLFFLNFTYKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTT
        E+QF+INLCPMLFFLNFTY+AS++WFYKTKNNAYTVMMVPAFGIYGQYAIYFPTT
Subjt:  ESQFRINLCPMLFFLNFTYKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTT

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]9.5e-9070.2Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLT FEPLLD+TSYLAQ SN  AD+KF P + +LI P  SPRF ATLQLS + F+NYSVDH H+SKV LESFHDA+LDGG F+SM+IHLL+K NQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV
         LRF TPSS+I P HHELT SPPQ  D  I   +L+  KF IVKS++LRR+IKELPIF +DS++CV VT+SQIKFSIASK IVL  + QHC+I GF  EV
Subjt:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV

Query:  ESQFRINLCPMLFFLNFTYKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTT
        E+QF+I L PMLFFLNFTYKA+K+WFYKTKNN+Y+VM VPAFGI GQY IYFP T
Subjt:  ESQFRINLCPMLFFLNFTYKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTT

TrEMBL top hitse value%identityAlignment
A0A0A0K902 Uncharacterized protein5.3e-6274.07Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLT F+PLLD+TS+ AQ S D+AD+KF P K F+I  +RSPRF ATLQLSP+WF+++SVDH HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQ+
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDS
         LRFDTPSS+IQP HHEL LSPPQ+ED QI +HELD  K+ IVKSK+LRR+IKELPIF NDS
Subjt:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDS

A0A1S3C8J1 uncharacterized protein LOC1034980109.4e-6761.43Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLV+L +FEPL+D+TS LAQ + D AD+KF P  L +IV NRSP+F ATLQLS R F+N+SVDH  SSKVSL+ FHDAMLDGG FSSM+IHLLD TNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV
         LRF+TPS  + P HHEL LSPPQ+E++     +++   F  V S+ LRR+IKELP+FH D+ + V+VT SQ+KFSI SK I+L++EG HCKI G+ GEV
Subjt:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV

Query:  ESQFRINLCPMLFFLNFTYKASK
        E++ ++ L PM+FFLNFTY+A+K
Subjt:  ESQFRINLCPMLFFLNFTYKASK

A0A1S3CL88 uncharacterized protein LOC1035022501.1e-10274.31Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKL  F+PLLD+TS+LAQ S DNAD+KF P K F+I  +RSPRF ATLQLSP+WF+ +SVD+ HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV
         LRFDTPSS+IQP HHELTLSPPQ+ED QI +HELD  K+ IVKSK+LRR+IK+LPIF NDSII V VT S++KFSIASK I+L+ EG+HCKIEGF  EV
Subjt:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV

Query:  ESQFRINLCPMLFFLNFTYKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFP
        E+QF+I LCPM+FFLNFTYKA+++WFYKTKNNAYT+M+VPA+GI+GQY IYFP
Subjt:  ESQFRINLCPMLFFLNFTYKASKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFP

A0A5D3BV00 Uncharacterized protein1.6e-98100Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEE
        FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEE
Subjt:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEE

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein2.5e-8072.77Show/hide
Query:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM
        MFLVKL  F+PLLD+TS+LAQ S DNAD+KF P K F+I  +RSPRF ATLQLSP+WF+ +SVD+ HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQM

Query:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV
         LRFDTPSS+IQP HHELTLSPPQ+ED QI +HELD  K+ IVKSK+LRR+IK+LPIF NDSII V VT S++KFSIASK I+L+ EG+HCKIEGF  EV
Subjt:  FLRFDTPSSQIQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGF-GEV

Query:  ESQFRINLCPMLF
        E+QF+I LCPM++
Subjt:  ESQFRINLCPMLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTCAAGCTTACAGAATTTGAGCCTCTTCTTGACTCAACCTCCTATCTTGCTCAATATTCGAACGACAATGCCGACATAAAATTCGCACCTGGGAAGCTCTT
CCTAATCGTCCCGAACCGTTCCCCTCGCTTCTTTGCAACGCTACAATTGTCGCCAAGATGGTTCTCCAACTATTCCGTCGATCATGTTCATAGTTCCAAGGTTTCCCTTG
AATCCTTCCATGATGCTATGTTGGATGGTGGAGATTTTTCTTCAATGTCAATCCATCTTTTGGACAAAACAAACCAAATGTTTCTTAGATTTGATACTCCTTCGAGCCAA
ATCCAACCTTCGCATCATGAATTGACATTGTCACCTCCCCAATCAGAAGACATTCAAATTTGCGAACATGAACTTGATCTAGATAAATTTGTCATAGTTAAATCTAAGTC
ATTAAGAAGAGTTATAAAAGAGTTACCTATCTTCCACAATGATTCAATCATTTGTGTTAGCGTAACCACTTCTCAAATCAAGTTCTCCATTGCATCAAAGGCGATTGTTC
TTAGTGAGGAGGGTCAACATTGTAAGATTGAAGGTTTTGGAGAAGTTGAAAGTCAATTCCGGATCAATCTTTGTCCTATGTTGTTTTTCCTGAATTTTACATATAAAGCA
AGCAAGATTTGGTTTTATAAGACAAAGAATAATGCTTATACTGTAATGATGGTTCCAGCTTTTGGAATTTATGGTCAATATGCAATCTATTTTCCCACCACATGA
mRNA sequenceShow/hide mRNA sequence
TATTGTTTTCGTAGTTAATTAATATATGAACTAAGATGTGTTTATAAAAGAAAAGGCTAGCCATTATTCTCCCCTTCATTTTCATTTTCATTCTCACATTTACTACACCA
CCATGTTCTTGGTCAAGCTTACAGAATTTGAGCCTCTTCTTGACTCAACCTCCTATCTTGCTCAATATTCGAACGACAATGCCGACATAAAATTCGCACCTGGGAAGCTC
TTCCTAATCGTCCCGAACCGTTCCCCTCGCTTCTTTGCAACGCTACAATTGTCGCCAAGATGGTTCTCCAACTATTCCGTCGATCATGTTCATAGTTCCAAGGTTTCCCT
TGAATCCTTCCATGATGCTATGTTGGATGGTGGAGATTTTTCTTCAATGTCAATCCATCTTTTGGACAAAACAAACCAAATGTTTCTTAGATTTGATACTCCTTCGAGCC
AAATCCAACCTTCGCATCATGAATTGACATTGTCACCTCCCCAATCAGAAGACATTCAAATTTGCGAACATGAACTTGATCTAGATAAATTTGTCATAGTTAAATCTAAG
TCATTAAGAAGAGTTATAAAAGAGTTACCTATCTTCCACAATGATTCAATCATTTGTGTTAGCGTAACCACTTCTCAAATCAAGTTCTCCATTGCATCAAAGGCGATTGT
TCTTAGTGAGGAGGGTCAACATTGTAAGATTGAAGGTTTTGGAGAAGTTGAAAGTCAATTCCGGATCAATCTTTGTCCTATGTTGTTTTTCCTGAATTTTACATATAAAG
CAAGCAAGATTTGGTTTTATAAGACAAAGAATAATGCTTATACTGTAATGATGGTTCCAGCTTTTGGAATTTATGGTCAATATGCAATCTATTTTCCCACCACATGACAT
ACATTGTGGGAAAATATATAGGTTTACATTGACATTGTTT
Protein sequenceShow/hide protein sequence
MFLVKLTEFEPLLDSTSYLAQYSNDNADIKFAPGKLFLIVPNRSPRFFATLQLSPRWFSNYSVDHVHSSKVSLESFHDAMLDGGDFSSMSIHLLDKTNQMFLRFDTPSSQ
IQPSHHELTLSPPQSEDIQICEHELDLDKFVIVKSKSLRRVIKELPIFHNDSIICVSVTTSQIKFSIASKAIVLSEEGQHCKIEGFGEVESQFRINLCPMLFFLNFTYKA
SKIWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTT