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MELO3C035219 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035219
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:28898519..28900115
RNA-Seq ExpressionMELO3C035219
SyntenyMELO3C035219
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575236.1 hypothetical protein SDJN03_25875, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2547.37Show/hide
Query:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL
        MF FIL++ H   +A+ V+A +  +  LKFS E  SIM + +P  +C IA+QL PP+F Q Y+C  LHYSWI I+  FP M D+ R GFSSL+FSF    
Subjt:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL

Query:  HADLTFCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVT
         A+L F      LRE DF +  S+GS D      D+ TFV+  S+EFINI+T
Subjt:  HADLTFCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVT

KGN45638.2 hypothetical protein Csa_005465, partial [Cucumis sativus]5.4e-5294.55Show/hide
Query:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL
        MFVFIL+EIHSFVDAVS LAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYIN FFPEMF +ERTGFSSLTFSFADS 
Subjt:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL

Query:  HADLTFCSRD
        HADLTFCSRD
Subjt:  HADLTFCSRD

TYK02997.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.9e-8798.15Show/hide
Query:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL
        MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL
Subjt:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL

Query:  HADLTFCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVTLNNFDSAGMM
        HADLTFCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVTLNNFDS  +M
Subjt:  HADLTFCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVTLNNFDSAGMM

WP_217833378.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.2e-2781.58Show/hide
Query:  ILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPE
        +L+EIH FVDA+S+LAGL YVF+LKFSP+MFSIM N TPS  CTIALQLFPPFFNQ YSCQQLHYSWIYIN FFPE
Subjt:  ILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPE

XP_023548336.1 uncharacterized protein LOC111807004 [Cucurbita pepo subsp. pepo]3.7e-2443.96Show/hide
Query:  IHSFVDAVSVLA-GLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSLHADLT--
        +H  VDA SVLA     +F++KFSP MFSIMA  TPS  C IALQL P FFN  Y C QLHY +IYI  F+  M + ER GFSSLTF+F +    D    
Subjt:  IHSFVDAVSVLA-GLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSLHADLT--

Query:  -----------------------------FCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVT-LNNFD
                                     F   +GH  E++ PM+ S   MD      D+ TFVS  SQEFINIVT  N+FD
Subjt:  -----------------------------FCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVT-LNNFD

TrEMBL top hitse value%identityAlignment
A0A0A0K833 Uncharacterized protein5.3e-5394.59Show/hide
Query:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL
        MFVFIL+EIHSFVDAVS LAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYIN FFPEMF +ERTGFSSLTFSFADS 
Subjt:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL

Query:  HADLTFCSRDG
        HADLTFCSRDG
Subjt:  HADLTFCSRDG

A0A5D3BU35 LINE-1 retrotransposable element ORF2 protein4.3e-8798.15Show/hide
Query:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL
        MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL
Subjt:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL

Query:  HADLTFCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVTLNNFDSAGMM
        HADLTFCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVTLNNFDS  +M
Subjt:  HADLTFCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVTLNNFDSAGMM

A0A6J1H4N0 uncharacterized protein LOC1114600095.7e-2343.41Show/hide
Query:  IHSFVDAVSVLA-GLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSLHADLT--
        +H  VDA SVLA     +F++KFSP MFSIMA  TPS  C I LQL P FFN  Y C QLHY +IYI  F+  M + ER GFSSLTF+F +    D    
Subjt:  IHSFVDAVSVLA-GLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSLHADLT--

Query:  -----------------------------FCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVT-LNNFD
                                     F   +GH  E++ PM+ S   MD      D  TFVS  SQEFINIVT  N+FD
Subjt:  -----------------------------FCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVT-LNNFD

A0A6J1KWL1 uncharacterized protein LOC1114988882.3e-2443.96Show/hide
Query:  IHSFVDAVSVLA-GLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSLHADLT--
        +H  VDA SVLA     +F++KFSP MFSIMA  TPS  C IALQL P FFN  Y C QLHY +IYI  F+  M + ER GFSSLTF+F +    D    
Subjt:  IHSFVDAVSVLA-GLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSLHADLT--

Query:  -----------------------------FCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVT-LNNFD
                                     F   +GH  E++ PM+ S   MD      D+ TFVS  SQEFINIVT  N+FD
Subjt:  -----------------------------FCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVT-LNNFD

A0A6J1L2R2 uncharacterized protein LOC1114993081.0e-1939.47Show/hide
Query:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL
        +F F+L ++   VDA SV+A    + ++KFS EMF+IMA+  P+    IAL L+P FF+ +Y C +L  SW ++   FP M DME +GF+SL+F+     
Subjt:  MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSL

Query:  HADLTFCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVT
         A+L F + +G   E++F +  S   ++      D+ +FVS  S+EF+NIVT
Subjt:  HADLTFCSRDGHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGTCTTTATACTGGAAGAAATCCACAGCTTCGTCGATGCCGTCTCCGTCCTCGCCGGCCTTGGCTACGTTTTCAATCTCAAATTCTCACCAGAAATGTTCTCAAT
AATGGCCAACCCCACACCTTCCCCTTCTTGTACCATAGCCCTTCAACTATTCCCTCCATTCTTCAATCAACAATATTCCTGCCAACAACTTCACTACTCATGGATTTACA
TCAACCCCTTTTTCCCTGAAATGTTCGATATGGAACGAACCGGTTTTTCTTCCCTCACGTTCTCTTTCGCAGATTCGCTCCATGCCGACCTCACATTTTGCAGTCGTGAT
GGCCATCTTCGAGAGATTGATTTCCCAATGTATCATTCGGACGGGTCAATGGATGCCTGCTATGATCAGTTGGATTGGGAAACTTTCGTCTCCTTCAGTTCACAAGAGTT
CATTAACATTGTAACGTTGAATAATTTTGATTCTGCGGGAATGATGATGGTGCTAAGGGGGTGTCCACCTAGTGGAGATGCCCGG
mRNA sequenceShow/hide mRNA sequence
TTTTCTTATTAACTTGTGAGAACAAACCTAATTGCAAAATCGTTTAACATTGAAATAAAAGAACCCCAAGCTCTTTGCCATTTAAACACCAAGAAACTAAAACCCCAAAT
GGCAGAAGTAGTGATCTCATAACACAATGTTCGTCTTTATACTGGAAGAAATCCACAGCTTCGTCGATGCCGTCTCCGTCCTCGCCGGCCTTGGCTACGTTTTCAATCTC
AAATTCTCACCAGAAATGTTCTCAATAATGGCCAACCCCACACCTTCCCCTTCTTGTACCATAGCCCTTCAACTATTCCCTCCATTCTTCAATCAACAATATTCCTGCCA
ACAACTTCACTACTCATGGATTTACATCAACCCCTTTTTCCCTGAAATGTTCGATATGGAACGAACCGGTTTTTCTTCCCTCACGTTCTCTTTCGCAGATTCGCTCCATG
CCGACCTCACATTTTGCAGTCGTGATGGCCATCTTCGAGAGATTGATTTCCCAATGTATCATTCGGACGGGTCAATGGATGCCTGCTATGATCAGTTGGATTGGGAAACT
TTCGTCTCCTTCAGTTCACAAGAGTTCATTAACATTGTAACGTTGAATAATTTTGATTCTGCGGGAATGATGATGGTGCTAAGGGGGTGTCCACCTAGTGGAGATGCCCG
GGT
Protein sequenceShow/hide protein sequence
MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANPTPSPSCTIALQLFPPFFNQQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSLHADLTFCSRD
GHLREIDFPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVTLNNFDSAGMMMVLRGCPPSGDAR