; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C035258 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035258
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Genome locationchr12:203440..204577
RNA-Seq ExpressionMELO3C035258
SyntenyMELO3C035258
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004252 - Probable transposase, Ptta/En/Spm, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046306.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]9.5e-5561.14Show/hide
Query:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV
        MNRFVEHQMLTTFKEFR DC+RHFKKYSDPEEARANPPN L                    EQS TNKAARQ       +GSKSFLQRQ+ELAE+KG+ V
Subjt:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV

Query:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLM
        DR+ELF E HVR GTF+S              P    S   +    MRYAIRCWVDDQ TQKALVGDPSRRPA  +VQA+ R+LV  P K RLNY LN M
Subjt:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLM

Query:  KLWNGLKCKIE
        KLWN LK KIE
Subjt:  KLWNGLKCKIE

KAA0048153.1 reverse transcriptase [Cucumis melo var. makuwa]2.0e-6061.36Show/hide
Query:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV
        MNRFVEHQ +TTFKEFRADC+RHFKKYSDPEEARANPPN L                    +QSRTNKA RQ       +GSKSFLQRQ+EL E++G+ +
Subjt:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV

Query:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSG-------MRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRL
        DR+ELF E H+R GTF+SQAA++AH +             SQP  G       MRYAIRCWVDDQ TQKALVGDPSRRPA ++VQAV RHLV  P K RL
Subjt:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSG-------MRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRL

Query:  NYNLNLMKLWNGLKCKIEIT
        NY LN MKLWNGLK KIEIT
Subjt:  NYNLNLMKLWNGLKCKIEIT

KAA0053771.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.4e-6067.51Show/hide
Query:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNILEQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELVDRMELFWEIHVRVGTFMSQA
        MN+FVEHQMLTTFKEF  DC+RHFKKYSDPEEARANPPN LEQSRTNKAARQ       +GSKSFLQRQ+ELAE++G+ VD +ELF E HVR GTF+SQA
Subjt:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNILEQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELVDRMELFWEIHVRVGTFMSQA

Query:  AKNAHVK----SNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLMKLWNGLKCKIEIT
         ++AH +     +  TP      GSQPL       +  VDDQ TQKALVGDPSRRPA +RVQAV RHLV  P K RLNY LN MKLWNGLK KIEIT
Subjt:  AKNAHVK----SNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLMKLWNGLKCKIEIT

TYK08102.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]1.4e-5860.37Show/hide
Query:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV
        MNRFVEHQ +TTFKEFRADC+RHFKKYSDPEEARANPPN L                    +QSRTNKA RQ       +GSKSFLQRQ+EL E++G+ +
Subjt:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV

Query:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSG-------MRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRL
        DR+ELF E H+R GTF+SQAA++AH +             SQP  G       MRYAIRCWVDDQ TQKALVGDPSRRPA ++VQAV RHLV  P K RL
Subjt:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSG-------MRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRL

Query:  NYNLNLMKLWNGLKCKI
        NY LN MKLWNGLK K+
Subjt:  NYNLNLMKLWNGLKCKI

TYK30471.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]9.5e-5561.14Show/hide
Query:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV
        MNRFVEHQMLTTFKEFR DC+RHFKKYSDPEEARANPPN L                    EQS TNKAARQ       +GSKSFLQRQ+ELAE+KG+ V
Subjt:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV

Query:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLM
        DR+ELF E HVR GTF+S              P    S   +    MRYAIRCWVDDQ TQKALVGDPSRRPA  +VQA+ R+LV  P K RLNY LN M
Subjt:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLM

Query:  KLWNGLKCKIE
        KLWN LK KIE
Subjt:  KLWNGLKCKIE

TrEMBL top hitse value%identityAlignment
A0A5A7TVZ5 CACTA en-spm transposon protein4.6e-5561.14Show/hide
Query:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV
        MNRFVEHQMLTTFKEFR DC+RHFKKYSDPEEARANPPN L                    EQS TNKAARQ       +GSKSFLQRQ+ELAE+KG+ V
Subjt:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV

Query:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLM
        DR+ELF E HVR GTF+S              P    S   +    MRYAIRCWVDDQ TQKALVGDPSRRPA  +VQA+ R+LV  P K RLNY LN M
Subjt:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLM

Query:  KLWNGLKCKIE
        KLWN LK KIE
Subjt:  KLWNGLKCKIE

A0A5A7TX19 Reverse transcriptase9.6e-6161.36Show/hide
Query:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV
        MNRFVEHQ +TTFKEFRADC+RHFKKYSDPEEARANPPN L                    +QSRTNKA RQ       +GSKSFLQRQ+EL E++G+ +
Subjt:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV

Query:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSG-------MRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRL
        DR+ELF E H+R GTF+SQAA++AH +             SQP  G       MRYAIRCWVDDQ TQKALVGDPSRRPA ++VQAV RHLV  P K RL
Subjt:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSG-------MRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRL

Query:  NYNLNLMKLWNGLKCKIEIT
        NY LN MKLWNGLK KIEIT
Subjt:  NYNLNLMKLWNGLKCKIEIT

A0A5D3C9X5 Transposon Ty3-I Gag-Pol polyprotein6.9e-5960.37Show/hide
Query:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV
        MNRFVEHQ +TTFKEFRADC+RHFKKYSDPEEARANPPN L                    +QSRTNKA RQ       +GSKSFLQRQ+EL E++G+ +
Subjt:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV

Query:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSG-------MRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRL
        DR+ELF E H+R GTF+SQAA++AH +             SQP  G       MRYAIRCWVDDQ TQKALVGDPSRRPA ++VQAV RHLV  P K RL
Subjt:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSG-------MRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRL

Query:  NYNLNLMKLWNGLKCKI
        NY LN MKLWNGLK K+
Subjt:  NYNLNLMKLWNGLKCKI

A0A5D3DPN3 CACTA en-spm transposon protein2.1e-6067.51Show/hide
Query:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNILEQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELVDRMELFWEIHVRVGTFMSQA
        MN+FVEHQMLTTFKEF  DC+RHFKKYSDPEEARANPPN LEQSRTNKAARQ       +GSKSFLQRQ+ELAE++G+ VD +ELF E HVR GTF+SQA
Subjt:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNILEQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELVDRMELFWEIHVRVGTFMSQA

Query:  AKNAHVK----SNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLMKLWNGLKCKIEIT
         ++AH +     +  TP      GSQPL       +  VDDQ TQKALVGDPSRRPA +RVQAV RHLV  P K RLNY LN MKLWNGLK KIEIT
Subjt:  AKNAHVK----SNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLMKLWNGLKCKIEIT

A0A5D3E4H2 CACTA en-spm transposon protein4.6e-5561.14Show/hide
Query:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV
        MNRFVEHQMLTTFKEFR DC+RHFKKYSDPEEARANPPN L                    EQS TNKAARQ       +GSKSFLQRQ+ELAE+KG+ V
Subjt:  MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNIL--------------------EQSRTNKAARQ-------NGSKSFLQRQHELAEKKGELV

Query:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLM
        DR+ELF E HVR GTF+S              P    S   +    MRYAIRCWVDDQ TQKALVGDPSRRPA  +VQA+ R+LV  P K RLNY LN M
Subjt:  DRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTYSRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLM

Query:  KLWNGLKCKIE
        KLWN LK KIE
Subjt:  KLWNGLKCKIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGGTTTGTTGAGCATCAAATGCTCACCACCTTTAAAGAGTTCCGGGCCGACTGTTACAGACACTTCAAAAAGTACAGCGACCCCGAGGAAGCTCGTGCCAACCC
ACCAAACATATTGGAGCAATCACGGACGAACAAGGCTGCTAGACAGAATGGGTCAAAGTCGTTTCTACAACGACAGCACGAGCTCGCTGAGAAGAAAGGGGAGTTGGTCG
ACCGTATGGAGTTGTTTTGGGAAATACATGTTCGAGTTGGGACGTTCATGTCACAGGCCGCAAAGAATGCGCATGTAAAATCAAATGCTGGAACTCCAGTCTCAACCTAC
TCCAGAGGTAGTCAGCCACTCTCTGGGATGAGATATGCGATCAGGTGTTGGGTAGACGACCAGATTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCGCAAG
ACAACGAGTGCAAGCAGTTTCACGACATCTTGTTCATCGTCCACACAAAAATAGATTGAATTACAATCTAAACTTAATGAAGCTTTGGAACGGATTGAAGTGCAAGATAG
AAATCACGTAG
mRNA sequenceShow/hide mRNA sequence
TGTAGCGATTTTTTGTGCTTGATTTTAATAATCAAGCAATGAATAGGTTTGTTGAGCATCAAATGCTCACCACCTTTAAAGAGTTCCGGGCCGACTGTTACAGACACTTC
AAAAAGTACAGCGACCCCGAGGAAGCTCGTGCCAACCCACCAAACATATTGGAGCAATCACGGACGAACAAGGCTGCTAGACAGAATGGGTCAAAGTCGTTTCTACAACG
ACAGCACGAGCTCGCTGAGAAGAAAGGGGAGTTGGTCGACCGTATGGAGTTGTTTTGGGAAATACATGTTCGAGTTGGGACGTTCATGTCACAGGCCGCAAAGAATGCGC
ATGTAAAATCAAATGCTGGAACTCCAGTCTCAACCTACTCCAGAGGTAGTCAGCCACTCTCTGGGATGAGATATGCGATCAGGTGTTGGGTAGACGACCAGATTACTCAA
AAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCGCAAGACAACGAGTGCAAGCAGTTTCACGACATCTTGTTCATCGTCCACACAAAAATAGATTGAATTACAATCTAAA
CTTAATGAAGCTTTGGAACGGATTGAAGTGCAAGATAGAAATCACGTAGCGTTAGCTTCACAAGTAGAACAAATGCAAAAGTTGATAAAAGACTTGACTCGGGCACAGCA
AGGACCACCCATGATCCCTAACTTTGCAGTACGTATATATGTCTCCATTATTCTTAAGTTTTTTGCAATGATAGTATACAGAGAACATATGGATATATGTACTAAACTTA
CTTGCTTTTGTATCATTGTAGGACCTAAGGTGTAGAATGGCGCGTACGAGCCTCGTTAGAAGACGTATGACTTTGTTTGCAGTTTTTTGTATTATAACTACATTTTTTGT
ATTATGAACAC
Protein sequenceShow/hide protein sequence
MNRFVEHQMLTTFKEFRADCYRHFKKYSDPEEARANPPNILEQSRTNKAARQNGSKSFLQRQHELAEKKGELVDRMELFWEIHVRVGTFMSQAAKNAHVKSNAGTPVSTY
SRGSQPLSGMRYAIRCWVDDQITQKALVGDPSRRPARQRVQAVSRHLVHRPHKNRLNYNLNLMKLWNGLKCKIEIT