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MELO3C035264 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035264
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Description50S ribosomal protein L2, chloroplastic
Genome locationchr12:907760..908911
RNA-Seq ExpressionMELO3C035264
SyntenyMELO3C035264
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR012340 - Nucleic acid-binding, OB-fold
IPR022666 - Ribosomal Proteins L2, RNA binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064006.1 ribosomal protein L2 [Cucumis melo var. makuwa]1.8e-3397.18Show/hide
Query:  MTIHLYKTSSPSPSCNGAVDNPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISFGMKKTYMVES
        M IHLYKTSSPSPSCNGAVDNPRKNWIYGQHRCGKGRNARGIITA HRGGGHKRLYRPISFGMKKTYMVES
Subjt:  MTIHLYKTSSPSPSCNGAVDNPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISFGMKKTYMVES
QSX27942.1 ribosomal protein L2 [Brachystegia eurycoma]8.5e-2080.3Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPRKNWIYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
QSX28107.1 ribosomal protein L2 [Brachystegia kennedyi]8.5e-2080.3Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPRKNWIYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
QSX28335.1 ribosomal protein L2 [Julbernardia paniculata]8.5e-2080.3Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPRKNWIYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
YP_009715588.1 ribosomal protein L2 [Saraca indica]8.5e-2080.3Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPRKNWIYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
TrEMBL top hitse value%identityAlignment
A0A5A7VC43 Ribosomal protein L2 (Chloroplast)8.5e-3497.18Show/hide
Query:  MTIHLYKTSSPSPSCNGAVDNPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISFGMKKTYMVES
        M IHLYKTSSPSPSCNGAVDNPRKNWIYGQHRCGKGRNARGIITA HRGGGHKRLYRPISFGMKKTYMVES
Subjt:  MTIHLYKTSSPSPSCNGAVDNPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISFGMKKTYMVES
A0A6H0E0M4 Ribosomal protein L24.1e-2080.3Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPRKNWIYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
A0A6H0E204 Ribosomal protein L24.1e-2080.3Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPRKNWIYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
A0A6H0E4D2 Ribosomal protein L24.1e-2080.3Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPRKNWIYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
A0A6H0EBR6 Ribosomal protein L24.1e-2080.3Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPRKNWIYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
SwissProt top hitse value%identityAlignment
A4QJF6 50S ribosomal protein L2, chloroplastic1.4e-2077.27Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPR N IYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
A4QJP0 50S ribosomal protein L2, chloroplastic1.4e-2077.27Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPR N IYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
P60406 50S ribosomal protein L2, chloroplastic3.6e-2178.79Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPRKN IYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
Q09FY3 50S ribosomal protein L2, chloroplastic7.9e-2174.29Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISFGMKK
        M IHLYKTS+PS + NGAVD     NPR N IYGQHRCGKGRNARGIITA HRGGGHKRLYR I F   K
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISFGMKK
Q09MB2 50S ribosomal protein L2, chloroplastic1.4e-2077.27Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPR N IYGQHRCGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
Arabidopsis top hitse value%identityAlignment
ATCG00830.1 ribosomal protein L24.0e-2074.24Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPR N I GQH CGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
ATCG01310.1 ribosomal protein L24.0e-2074.24Show/hide
Query:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF
        M IHLYKTS+PS + NGAVD     NPR N I GQH CGKGRNARGIITA HRGGGHKRLYR I F
Subjt:  MTIHLYKTSSPSPSCNGAVD-----NPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATACATTTATACAAAACTTCTAGCCCGAGCCCGAGTTGCAATGGAGCCGTAGACAATCCACGAAAGAATTGGATCTATGGACAGCATCGTTGTGGTAAAGGTCG
TAATGCCAGAGGAATCATTACTGCAGTGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTCCAATCTCTTTTGGAATGAAAAAGACATATATGGTAGAATCGTAA
mRNA sequenceShow/hide mRNA sequence
ATATTCCTTAGACTGATAATGTTGAATCAGGATCAACTAGGACTTAAGTCAAGAGGATGGGTCGAACTCTTCTTTGGTGTCAAGATAATAGCTATGAATAGTCATTGACT
TCCGAAAAAGGGTAGAAGAATGAGACCTATTATGGAACATACAATGCATTACAGACGTGAATATGGAATGTCATGACTTATAACGAAGTGGTCTGAAATCAAAATACTGA
ATAGCATGACGATACATTTATACAAAACTTCTAGCCCGAGCCCGAGTTGCAATGGAGCCGTAGACAATCCACGAAAGAATTGGATCTATGGACAGCATCGTTGTGGTAAA
GGTCGTAATGCCAGAGGAATCATTACTGCAGTGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTCCAATCTCTTTTGGAATGAAAAAGACATATATGGTAGAATCGTA
ACCATAGAATACGACCCTAATCGAAATGAATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGAGATATTTGACATCCCAGAGGGGCTATAATTGGTGATACCAT
TCTTTCTGGTATAGAAGTTCCTATCAAAATGGGAAATACCCTACTGGTCTAAACTATTGATTTACATAATTGGAAGTAACCAATTAGGTTGACGATAAAACCTAGAAATC
GATCACTGATCCAATTTGAGTACCTCCACAGGATAGACCTCAACAGAAAACTGAAGAGTAACGGCAGCAAGTGATTGAGTTCAGTAGTTCCTCATATCAAATTATTGACT
CTAGAGATATAGTAATATGGAGAAGACTAAATTGTTTCAAGCACCGACAGAACCAGAAGCGTCCCTTGTTTCAAAGAGAGGAGGACTTTCATTGACATTTGATGGTCAGA
GGCAAATTGAAAGCTAAGCAGTGGTAATTCTAAGGATTCCTGAAGGAAAAAAGAGAGATGTCTCCTACATTGCTCGTAATATGTGGAAGTATCGACGTCATTTCATAGAG
TCATTCGGTCTGAATGCTACATGAGAACATAAGCCAGATGAAGGAACGGGAAGACCTAGGATGTAGAAGATCATAACATGAGTGATTCGGCAGATTTGGA
Protein sequenceShow/hide protein sequence
MTIHLYKTSSPSPSCNGAVDNPRKNWIYGQHRCGKGRNARGIITAVHRGGGHKRLYRPISFGMKKTYMVES