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MELO3C035290 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035290
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionvacuolar protein-sorting-associated protein 33 homolog isoform X1
Genome locationchr12:2512786..2515242
RNA-Seq ExpressionMELO3C035290
SyntenyMELO3C035290
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445756.1 PREDICTED: uncharacterized protein LOC103488684 isoform X7 [Cucumis melo]7.2e-0976.09Show/hide
Query:  ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL
        +  +LFSF AIPNVR KGRA V VA+ILNHLQR+EPVNSNDV+VEL
Subjt:  ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL
XP_008457513.1 PREDICTED: vacuolar protein-sorting-associated protein 33 homolog isoform X2 [Cucumis melo]3.1e-36100Show/hide
Query:  CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELE
        CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELE
Subjt:  CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELE
XP_016900092.1 PREDICTED: uncharacterized protein LOC103488684 isoform X3 [Cucumis melo]7.2e-0976.09Show/hide
Query:  ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL
        +  +LFSF AIPNVR KGRA V VA+ILNHLQR+EPVNSNDV+VEL
Subjt:  ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL
XP_016902108.1 PREDICTED: vacuolar protein-sorting-associated protein 33 homolog isoform X1 [Cucumis melo]1.0e-47100Show/hide
Query:  MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV
        MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV
Subjt:  MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV
XP_031741425.1 vacuolar protein-sorting-associated protein 33 homolog isoform X5 [Cucumis sativus]2.8e-0858.57Show/hide
Query:  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNV
        SF L+ S    + +  T SL  I+  +    FSF AIPNVR KGRASV VA+ILNHLQ EEPVNSNDVN+
Subjt:  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNV
TrEMBL top hitse value%identityAlignment
A0A1S3BE53 uncharacterized protein LOC103488684 isoform X73.5e-0976.09Show/hide
Query:  ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL
        +  +LFSF AIPNVR KGRA V VA+ILNHLQR+EPVNSNDV+VEL
Subjt:  ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL
A0A1S3BGU5 vacuolar protein-sorting-associated protein 33 homolog isoform X11.3e-0858.57Show/hide
Query:  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNV
        SF L+ S    + +  T SL  I+  +    FSF AIPNVR KGRASV VA+ILNHLQ EEPVNSNDVN+
Subjt:  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNV
A0A1S3C5U0 vacuolar protein-sorting-associated protein 33 homolog isoform X21.5e-36100Show/hide
Query:  CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELE
        CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELE
Subjt:  CIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELE
A0A1S4DVT2 uncharacterized protein LOC103488684 isoform X33.5e-0976.09Show/hide
Query:  ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL
        +  +LFSF AIPNVR KGRA V VA+ILNHLQR+EPVNSNDV+VEL
Subjt:  ISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVEL
A0A1S4E1K7 vacuolar protein-sorting-associated protein 33 homolog isoform X15.0e-48100Show/hide
Query:  MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV
        MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV
Subjt:  MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV
SwissProt top hitse value%identityAlignment
Q94KJ7 Vacuolar protein-sorting-associated protein 33 homolog3.2e-0750Show/hide
Query:  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDV
        SF LELS    + +    SL  I+  +    FSF  I  +R KG+ASV VA+ILN +Q EEPVNSNDV
Subjt:  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDV
Arabidopsis top hitse value%identityAlignment
AT3G54860.1 Sec1/munc18-like (SM) proteins superfamily2.2e-0850Show/hide
Query:  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDV
        SF LELS    + +    SL  I+  +    FSF  I  +R KG+ASV VA+ILN +Q EEPVNSNDV
Subjt:  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDV
AT3G54860.2 Sec1/munc18-like (SM) proteins superfamily2.2e-0850Show/hide
Query:  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDV
        SF LELS    + +    SL  I+  +    FSF  I  +R KG+ASV VA+ILN +Q EEPVNSNDV
Subjt:  SFLLELSAFGAIAEPSTKSLGIISTYL----FSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTCTGAACTTTTCCCTTTAATGTTCTTTCATGCTCATTTGGTACAGTGCATCATGCTGAATGGCATGGATCGATGGAATGCTAGTTTTCTTTTGGAG
TTGTCAGCTTTTGGAGCCATTGCAGAGCCCTCTACCAAATCGCTTGGTATAATAAGTACATATCTGTTTTCCTTTGAGGCAATACCAAATGTGAGAACCAAAGGG
AGAGCATCAGTACATGTTGCTAACATTCTAAATCATTTGCAAAGAGAGGAACCTGTTAACTCAAATGATGTAAATGTTGAACTTGAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
CTTTTTTTTTCTTTTTTTTTTTGCGCATTGTCATCGTTCGTCTGAAGGGGTCTGAAGAACGAAAGGGGCTGCTCTGAAGAACGAAAATCCCTTGTCCCTAGCTCT
CACGATCTCTGTTCGTCTCTTTACTGCCGATGGCCATTCTCGACGACGGTCGTTCTATCGACGACCGTTCAACCGAAAAACAGAGCGAAAGAAAAATCCCTCCCT
CTCTCGATGGCTGTTCGACCGACGACGACGACAACGTCTCTCCTGTTGTGTTTGCGAAGTCATATTTTTGCGCCTGCCCAATATCAACCTTCCTTTGTCTGCTGA
GCGCAAGTCACTGCAACAATGGACTGGCTGGAAATTTCATGGGATGAATTACATATAAAGGAGCATGTTGGAGCTAGTAATTTCACATCTTGTCATATCTGCTCG
TATTAAATTTATAAACAGATGGCGGATTCTGAACTTTTCCCTTTAATGTTCTTTCATGCTCATTTGGTACAGTGCATCATGCTGAATGGCATGGATCGATGGAAT
GCTAGTTTTCTTTTGGAGTTGTCAGCTTTTGGAGCCATTGCAGAGCCCTCTACCAAATCGCTTGGTATAATAAGTACATATCTGTTTTCCTTTGAGGCAATACCA
AATGTGAGAACCAAAGGGAGAGCATCAGTACATGTTGCTAACATTCTAAATCATTTGCAAAGAGAGGAACCTGTTAACTCAAATGATGTAAATGTTGAACTTGAA
GTTTAAGGAAATTGGCAGAAGTAGTAGGCCTGCTGAATCTTTTAAGGCGTCTGAGCAGGCTACAGAGAAGAAGAAAGGATTGGTTGAAAATAATACTAACTTTAA
CATTCATATCAAAAATGACTTGGAGCATTGAATAACCAAAACCAAATTCAAAAAAGTTACCCTATTTGGTATTTCTCCACCTACCTTTACCCTATTAGTCGTATA
ATCGGACTAACGACTCAGGAAAGTGATATGATATATAGTTCCTTGTTAAAAGTACCACACACTCTTATGGTGAGTCGTGACA
Protein sequenceShow/hide protein sequence
MADSELFPLMFFHAHLVQCIMLNGMDRWNASFLLELSAFGAIAEPSTKSLGIISTYLFSFEAIPNVRTKGRASVHVANILNHLQREEPVNSNDVNVELEV