CuGenDBv2

Gene ID	MELO3C035312
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	ATP synthase subunit alpha
Genome location	chr12:4403742..4404008
RNA-Seq Expression	MELO3C035312
Synteny	MELO3C035312
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005739 - mitochondrion (cellular component) GO:0031090 - organelle membrane (cellular component) GO:0031967 - organelle envelope (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR004100 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPR023366 - ATP synthase subunit alpha, N-terminal domain-like superfamily IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AUD38671.1 ATP synthase F1 subunit 1 [Colletoecema dewevrei]

2.5e-16

87.04

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEF NGVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

KAA0051941.1 ATPase subunit 1 [Cucumis melo var. makuwa]

2.7e-18

92.59

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEFVN VKGIALNLENE+VWIVVFGSDTAIKEGDL+KR GSIMDIPARKVMLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

KAA0051944.1 ATPase subunit 1 [Cucumis melo var. makuwa]

3.9e-17

90.74

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEFVNGVKGI LNLENE+V IVVFGSD AIKEGDLVKRTGSIMDIP RKVMLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

KAA0051946.1 ATPase subunit 1 [Cucumis melo var. makuwa]

1.7e-20

100

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

TYK12216.1 ATPase subunit 1 [Cucumis melo var. makuwa]

3.9e-17

90.74

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEFVNGVKGI LNLENE+V IVVFGSD AIKEGDLVKRTGSIMDIP RKVMLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U9C2 ATPase subunit 1 (Mitochondrion)

1.9e-17

90.74

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEFVNGVKGI LNLENE+V IVVFGSD AIKEGDLVKRTGSIMDIP RKVMLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

A0A5A7UCL8 ATPase subunit 1 (Mitochondrion)

8.2e-21

100

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

A0A5A7UEG9 ATPase subunit 1 (Mitochondrion)

1.3e-18

92.59

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEFVN VKGIALNLENE+VWIVVFGSDTAIKEGDL+KR GSIMDIPARKVMLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

A0A5D3CP90 ATPase subunit 1 (Mitochondrion)

1.9e-17

90.74

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEFVNGVKGI LNLENE+V IVVFGSD AIKEGDLVKRTGSIMDIP RKVMLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

Q8SIE4 ATP synthase subunit alpha (Fragment)

1.2e-16

87.04

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEF NGVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

SwissProt top hits

e value

%identity

Alignment

P05494 ATP synthase subunit alpha, mitochondrial

1.3e-18

85.19

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

P05495 ATP synthase subunit alpha, mitochondrial

1.3e-18

85.19

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

P0C520 ATP synthase subunit alpha, mitochondrial

1.3e-18

85.19

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

P18260 ATP synthase subunit alpha, mitochondrial

1.3e-18

85.19

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

Q06735 ATP synthase subunit alpha, mitochondrial

1.3e-18

85.19

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

1.3e-18

81.48

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MV F NGVKG+ALNLENE+V IVVFG DTAIKEGDLVKRTGSI+D+PA K MLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

ATCG00120.1 ATP synthase subunit alpha

1.8e-07

48.15

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        +VEF  G  GIALNLE+ +V +V+ G    I+EG  VK TG I  IP  +  LG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

ATMG01190.1 ATP synthase subunit 1

1.3e-18

81.48

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG
        MV F NGVKG+ALNLENE+V IVVFG DTAIKEGDLVKRTGSI+D+PA K MLG
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

Sequences

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CDS sequence

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ATGGTAGAATTTGTCAACGGTGTCAAAGGAATAGCCTTAAATCTTGAGAATGAGAGTGTATGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAGGAGAT
CTTGTCAAGCGCACTGGATCGATTATGGATATTCCAGCAAGAAAGGTTATGCTTGGG

mRNA sequence

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ACAAACTTCAAAACGTCTTTGAAAGTGGATGAAATGGGTTGAGTTCTATCTATAGGAGATGGAATTGCTTACGTTTATGGATTGAAGGAGATTCAAAGTAGGGAA
ATGGTAGAATTTGTCAACGGTGTCAAAGGAATAGCCTTAAATCTTGAGAATGAGAGTGTATGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAGGAGAT
CTTGTCAAGCGCACTGGATCGATTATGGATATTCCAGCAAGAAAGGTTATGCTTGGG

Protein sequence

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MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLG

MELO3C035312 (gene) of Melon (DHL92) v4 genome