; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C035340 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035340
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionHomeobox domain-containing protein
Genome locationchr12:2107895..2109404
RNA-Seq ExpressionMELO3C035340
SyntenyMELO3C035340
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0099402 - plant organ development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607233.1 Inner membrane protein ALBINO3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1547.52Show/hide
Query:  LPL-PLLPLLPIMNIKILKTWVSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGP
        LPL P  P  P  N+       SPYYVHQN VG+YP  Q+NS +              RR+       +S  N+N     TT+TLSLFPTHPTGDLQAGP
Subjt:  LPL-PLLPLLPIMNIKILKTWVSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGP

Query:  ---QSPPPP--TLTTVSASASDGISDDDSAGGRQPYFEFFM
            SPPPP     T +ASAS G+S D+S+GG + YFEFF+
Subjt:  ---QSPPPP--TLTTVSASASDGISDDDSAGGRQPYFEFFM

KGN65708.1 hypothetical protein Csa_019930 [Cucumis sativus]1.6e-4485.96Show/hide
Query:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDD
        SPYYVHQN+VGLYP YQNNSMVIQS GI  KRSKSERRNCIININEESTIN+NNLSYQTTETLSLFPTHPTGDLQA PQSPPPP++  V  SASD IS D
Subjt:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDD

Query:  DSAGGRQPYFEFFM
        DSA GRQPYFEFFM
Subjt:  DSAGGRQPYFEFFM

XP_022158904.1 WUSCHEL-related homeobox 2 [Momordica charantia]4.9e-2257.89Show/hide
Query:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDD
        SPYYVHQN+VGLYPPY NNS  +QSSGI ++RSKSERRN     N E  ++  NL+ Q TETLSLFPTHPTGDLQ GP  P      T S +++D  S  
Subjt:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDD

Query:  DSAGGRQPYFEFFM
         S+ GR  YF+FF+
Subjt:  DSAGGRQPYFEFFM

XP_022998665.1 WUSCHEL-related homeobox 2-like [Cucurbita maxima]3.6e-1745.89Show/hide
Query:  LPL-PLLPLLPIMNIKILKTWVSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQT-------TETLSLFPTHPT
        LPL P  P  P  N+       SPYYVHQN VG+YP  Q+NS          +RS SERR+C          NN    YQ+       T+TL LFPTHPT
Subjt:  LPL-PLLPLLPIMNIKILKTWVSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQT-------TETLSLFPTHPT

Query:  GDLQAGPQSP---PPPTLTTVSASASDGISDDDSAGGRQPYFEFFM
        GDLQ GP  P   PP  + + SAS+S G+S D+S+GG + YFEFF+
Subjt:  GDLQAGPQSP---PPPTLTTVSASASDGISDDDSAGGRQPYFEFFM

XP_031742465.1 WUSCHEL-related homeobox 2 [Cucumis sativus]1.6e-4485.96Show/hide
Query:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDD
        SPYYVHQN+VGLYP YQNNSMVIQS GI  KRSKSERRNCIININEESTIN+NNLSYQTTETLSLFPTHPTGDLQA PQSPPPP++  V  SASD IS D
Subjt:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDD

Query:  DSAGGRQPYFEFFM
        DSA GRQPYFEFFM
Subjt:  DSAGGRQPYFEFFM

TrEMBL top hitse value%identityAlignment
A0A0A0LVA9 Homeobox domain-containing protein7.5e-4585.96Show/hide
Query:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDD
        SPYYVHQN+VGLYP YQNNSMVIQS GI  KRSKSERRNCIININEESTIN+NNLSYQTTETLSLFPTHPTGDLQA PQSPPPP++  V  SASD IS D
Subjt:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDD

Query:  DSAGGRQPYFEFFM
        DSA GRQPYFEFFM
Subjt:  DSAGGRQPYFEFFM

A0A1Q3AQ94 Homeobox domain-containing protein3.8e-0431.06Show/hide
Query:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININ------------EESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSP-------
        SPYY+ Q+++G+YPPYQ+  + + + G  ++R++ ++    I                E T +N+  S Q  ETL+LFP HPTG    G + P       
Subjt:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININ------------EESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSP-------

Query:  -PPPTLTTVSASASDGISDDDSAGGRQPYFEF
          P T +  S    DG SD       +P+F+F
Subjt:  -PPPTLTTVSASASDGISDDDSAGGRQPYFEF

A0A6J1E0T1 WUSCHEL-related homeobox 22.4e-2257.89Show/hide
Query:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDD
        SPYYVHQN+VGLYPPY NNS  +QSSGI ++RSKSERRN     N E  ++  NL+ Q TETLSLFPTHPTGDLQ GP  P      T S +++D  S  
Subjt:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDD

Query:  DSAGGRQPYFEFFM
         S+ GR  YF+FF+
Subjt:  DSAGGRQPYFEFFM

A0A6J1KD41 WUSCHEL-related homeobox 2-like1.7e-1745.89Show/hide
Query:  LPL-PLLPLLPIMNIKILKTWVSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQT-------TETLSLFPTHPT
        LPL P  P  P  N+       SPYYVHQN VG+YP  Q+NS          +RS SERR+C          NN    YQ+       T+TL LFPTHPT
Subjt:  LPL-PLLPLLPIMNIKILKTWVSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQT-------TETLSLFPTHPT

Query:  GDLQAGPQSP---PPPTLTTVSASASDGISDDDSAGGRQPYFEFFM
        GDLQ GP  P   PP  + + SAS+S G+S D+S+GG + YFEFF+
Subjt:  GDLQAGPQSP---PPPTLTTVSASASDGISDDDSAGGRQPYFEFFM

M1CZ36 WOX22.9e-0440.43Show/hide
Query:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASAS
        SPYY  QN +G Y  Y   SM+I   G  K+R+   +    +N+ E++ I N N  +   ETL+LFP HPTG LQ         T TT S+S+S
Subjt:  SPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSKSERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATATCGAAGGCAAAAATGTGTTCTATTGGTTTCAAAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACAGCATCATCATCATCATCATCATTTTAATTCC
TCTTTCCCTTTTTATAATCACTTCCTTCACTTCAATCACACCAACTCTCCTTTCCCTCCCCCTCCCCCTCCTCCCCCTCCTCCCAATAATGAATATTAAAATTTTGAAAA
CGTGGGTTAGCCCATACTACGTACATCAAAACGAAGTCGGACTGTATCCACCATACCAAAACAATTCAATGGTGATTCAAAGCAGTGGGATTGTGAAGAAAAGATCAAAA
AGTGAGAGAAGAAATTGTATTATTAATATCAATGAGGAATCAACTATCAATAATAATAACCTTAGCTATCAAACTACTGAAACTCTCTCCCTCTTTCCCACGCACCCAAC
TGGGGATTTACAAGCCGGCCCACAGTCGCCACCGCCACCGACACTGACGACGGTGTCCGCTTCGGCCTCTGATGGAATCTCTGACGACGATTCTGCTGGTGGCCGTCAAC
CTTACTTTGAATTTTTTATGTAG
mRNA sequenceShow/hide mRNA sequence
TTTATATATAATAATTGTTTGATGGAAAAGATGACGGCGGAGATGGGGGGCGGAGGTGGTGGTGGTGGGCCTCCGGTGAGTTCACGGTGGAATCCGACAAAAGAGCAAAT
AAGCATATTGGAGAATTTATATAGACAAGGAGTGAGAACGCCGAGTGCTGATCAAATACAACAAATAACGGTTAGGCTTAAGGATTATGGTCATATCGAAGGCAAAAATG
TGTTCTATTGGTTTCAAAATCATAAAGCTAGACAAAGGCAGAAGCAAAAACAACAGCATCATCATCATCATCATCATTTTAATTCCTCTTTCCCTTTTTATAATCACTTC
CTTCACTTCAATCACACCAACTCTCCTTTCCCTCCCCCTCCCCCTCCTCCCCCTCCTCCCAATAATGAATATTAAAATTTTGAAAACGTGGGTTAGCCCATACTACGTAC
ATCAAAACGAAGTCGGACTGTATCCACCATACCAAAACAATTCAATGGTGATTCAAAGCAGTGGGATTGTGAAGAAAAGATCAAAAAGTGAGAGAAGAAATTGTATTATT
AATATCAATGAGGAATCAACTATCAATAATAATAACCTTAGCTATCAAACTACTGAAACTCTCTCCCTCTTTCCCACGCACCCAACTGGGGATTTACAAGCCGGCCCACA
GTCGCCACCGCCACCGACACTGACGACGGTGTCCGCTTCGGCCTCTGATGGAATCTCTGACGACGATTCTGCTGGTGGCCGTCAACCTTACTTTGAATTTTTTATGTAG
Protein sequenceShow/hide protein sequence
MVISKAKMCSIGFKIIKLDKGRSKNNSIIIIIIILIPLSLFIITSFTSITPTLLSLPLPLLPLLPIMNIKILKTWVSPYYVHQNEVGLYPPYQNNSMVIQSSGIVKKRSK
SERRNCIININEESTINNNNLSYQTTETLSLFPTHPTGDLQAGPQSPPPPTLTTVSASASDGISDDDSAGGRQPYFEFFM