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MELO3C035377 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035377
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionU-box domain-containing protein 4
Genome locationchr12:8304985..8305227
RNA-Seq ExpressionMELO3C035377
SyntenyMELO3C035377
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032595.1 U-box domain-containing protein 2 [Cucumis melo var. makuwa]2.0e-1191.11Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        + +S+LAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

TYK08307.1 U-box domain-containing protein 3-like [Cucumis melo var. makuwa]1.7e-1091.11Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        MLLSSLAGIQEGKDAIVEEGGI ALVEAIED  VKGK+FAVLTLL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

TYK20890.1 U-box domain-containing protein 2 [Cucumis melo var. makuwa]2.0e-1191.11Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        + +S+LAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

XP_008467070.1 PREDICTED: U-box domain-containing protein 3-like [Cucumis melo]1.7e-1091.11Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        MLLSSLAGIQEGKDAIVEEGGI ALVEAIED  VKGK+FAVLTLL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

XP_023518630.1 U-box domain-containing protein 4-like [Cucurbita pepo subsp. pepo]2.3e-1088.89Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        ++LSSLAGIQEGKDAIVEEGGI ALVEAIED SVKGK+FAVLTLL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

TrEMBL top hitse value%identityAlignment
A0A1S3CTY9 U-box domain-containing protein 3-like8.4e-1191.11Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        MLLSSLAGIQEGKDAIVEEGGI ALVEAIED  VKGK+FAVLTLL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

A0A5A7STN7 U-box domain-containing protein 29.9e-1291.11Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        + +S+LAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

A0A5D3C8M0 U-box domain-containing protein 3-like8.4e-1191.11Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        MLLSSLAGIQEGKDAIVEEGGI ALVEAIED  VKGK+FAVLTLL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

A0A5D3CRG4 U-box domain-containing protein 41.1e-1088.89Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        ++LSSLAGIQEGKDAIVEEGGI ALVEAIED SVKGK+FAVLTLL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

A0A5D3DBP6 U-box domain-containing protein 29.9e-1291.11Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        + +S+LAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23140.1 RING/U-box superfamily protein with ARM repeat domain7.5e-0450Show/hide
Query:  LLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        +L++LA I EG++AI +EGGI  LVE +E  S +GK+ A   LL
Subjt:  LLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

AT2G23140.2 RING/U-box superfamily protein with ARM repeat domain7.5e-0450Show/hide
Query:  LLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        +L++LA I EG++AI +EGGI  LVE +E  S +GK+ A   LL
Subjt:  LLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

AT4G16490.1 ARM repeat superfamily protein3.4e-1277.78Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        ++LSSLA I +GK+AIVEEGGI ALVEAIED SVKGK+FA+LTLL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL

AT5G67340.1 ARM repeat superfamily protein2.0e-0451.11Show/hide
Query:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL
        ++L++LA ++EGK AI EEGGI  LVE +E  S +GK+ A   LL
Subjt:  MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTGAGTAGCCTGGCTGGGATTCAAGAGGGAAAGGATGCGATTGTGGAAGAGGGTGGAATTGTTGCGCTTGTAGAAGCAATTGAAGATGAGTCAGTGAAAGGGAA
AGACTTTGCAGTTTTGACACTCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTGAGTAGCCTGGCTGGGATTCAAGAGGGAAAGGATGCGATTGTGGAAGAGGGTGGAATTGTTGCGCTTGTAGAAGCAATTGAAGATGAGTCAGTGAAAGGGAA
AGACTTTGCAGTTTTGACACTCTTGTAATTGTGTGTTGAGAGTGTGAGAAATCGAGGGTTGCTCGTCAACGAAGGTGGAATTTCCCCTTTAGTTGCACTTTCTCATACTG
GAATCGTTTGAGCAAAGCATAAG
Protein sequenceShow/hide protein sequence
MLLSSLAGIQEGKDAIVEEGGIVALVEAIEDESVKGKDFAVLTLL