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MELO3C035393 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035393
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionF-box protein
Genome locationchr12:3211651..3216228
RNA-Seq ExpressionMELO3C035393
SyntenyMELO3C035393
Gene Ontology termsGO:0006013 - mannose metabolic process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0004559 - alpha-mannosidase activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047802.1 uncharacterized protein E6C27_scaffold133G00460 [Cucumis melo var. makuwa]3.0e-1186.36Show/hide
Query:  RWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
        R DHQSGIDIDI IIRVIRRDHSQPDCLSVSF+YTKDQ VL  P
Subjt:  RWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
KAA0066563.1 hypothetical protein E6C27_scaffold25G001330 [Cucumis melo var. makuwa]1.2e-1278.18Show/hide
Query:  MEYFVWLKSPVRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
        MEYFVWLKS VR D QSGIDID  +IRVI RD SQPDCLSVSF YT DQ VL VP
Subjt:  MEYFVWLKSPVRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
TYK06480.1 hypothetical protein E5676_scaffold70G00040 [Cucumis melo var. makuwa]7.7e-1564.71Show/hide
Query:  RIKLIGKFLLSAMEYFVWLKS------------------PVRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
        RIKLIG+FLLSA EY VWLKS                   VR D QS IDID  +IRVIRRDHSQPDCLSVSF YTKDQIVL VP
Subjt:  RIKLIGKFLLSAMEYFVWLKS------------------PVRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
TYK18658.1 F-box protein [Cucumis melo var. makuwa]3.3e-1078.85Show/hide
Query:  VWLKSPVRWDHQSGIDID-IYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
        V L   VR D QSGIDID I +IRVIRRDHSQPDCLSVSF YTKDQIVL VP
Subjt:  VWLKSPVRWDHQSGIDID-IYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
TYK27687.1 hypothetical protein E5676_scaffold225G00160 [Cucumis melo var. makuwa]6.5e-1462.35Show/hide
Query:  RIKLIGKFLLSAMEYFVWLKSP------------------VRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
        RIKLIG+FLLS  EY VWLKSP                  VR D QSGIDID  IIRVIRRD SQPDCLSVS  YT DQ VL VP
Subjt:  RIKLIGKFLLSAMEYFVWLKSP------------------VRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
TrEMBL top hitse value%identityAlignment
A0A5A7TWC9 Uncharacterized protein1.5e-1186.36Show/hide
Query:  RWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
        R DHQSGIDIDI IIRVIRRDHSQPDCLSVSF+YTKDQ VL  P
Subjt:  RWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
A0A5A7VEV4 Uncharacterized protein5.9e-1378.18Show/hide
Query:  MEYFVWLKSPVRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
        MEYFVWLKS VR D QSGIDID  +IRVI RD SQPDCLSVSF YT DQ VL VP
Subjt:  MEYFVWLKSPVRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
A0A5D3C571 Uncharacterized protein3.7e-1564.71Show/hide
Query:  RIKLIGKFLLSAMEYFVWLKS------------------PVRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
        RIKLIG+FLLSA EY VWLKS                   VR D QS IDID  +IRVIRRDHSQPDCLSVSF YTKDQIVL VP
Subjt:  RIKLIGKFLLSAMEYFVWLKS------------------PVRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
A0A5D3D540 F-box protein1.6e-1078.85Show/hide
Query:  VWLKSPVRWDHQSGIDID-IYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
        V L   VR D QSGIDID I +IRVIRRDHSQPDCLSVSF YTKDQIVL VP
Subjt:  VWLKSPVRWDHQSGIDID-IYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
A0A5D3DV76 Uncharacterized protein3.2e-1462.35Show/hide
Query:  RIKLIGKFLLSAMEYFVWLKSP------------------VRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
        RIKLIG+FLLS  EY VWLKSP                  VR D QSGIDID  IIRVIRRD SQPDCLSVS  YT DQ VL VP
Subjt:  RIKLIGKFLLSAMEYFVWLKSP------------------VRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19485.1 transferases;nucleotidyltransferases1.7e-0451.06Show/hide
Query:  QIDIRADLIDAYISA-----VQEVLYQNDTFHSLRQDVLSYLVRSPL
        +++IR+DL+D++I A     +QEVL Q   F SL+QDVL YLVR+ L
Subjt:  QIDIRADLIDAYISA-----VQEVLYQNDTFHSLRQDVLSYLVRSPL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAAGTTAGAAAGTAAAGTAAAAAGAAAAAGGATCAAGTTAATTGGAAAATTTTTACTGTCCGCTATGGAGTACTTTGTTTGGCTAAAATCTCCAGTCCGA
TGGGACCACCAGTCTGGCATTGACATTGATATATACATAATTCGAGTGATTCGACGGGATCACTCGCAGCCCGATTGTCTTAGTGTTTCCTTCATGTACACTAAA
GACCAGATTGTCCTAGATGTTCCTTCGTCCATTGCAATGATATCCGACAGAGAATGGCTGAGGATCCACCTAGGGCGGACAAACACTCAATATATACTCTTCTCC
TTGCTGAAAAGTATTTGTAAAAAGCATGGAGTTAAGGTTTATGCTTGTGTAGGTCGACAAAGAATTCGTGGAAGTTTTAGCATTCAGATAGATATCCGAGCTGAT
CTCATTGATGCATATATATCTGCTGTGCAAGAGGTTCTTTATCAAAATGATACTTTCCATAGCCTTAGGCAAGATGTGTTGTCCTATCTTGTGCGGAGCCCGTTG
GTTTTGCAAGAATCCATTGGAGCAGTAAAGTCATATTTGCGGCAATTGATTGATTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAAGTTAGAAAGTAAAGTAAAAAGAAAAAGGATCAAGTTAATTGGAAAATTTTTACTGTCCGCTATGGAGTACTTTGTTTGGCTAAAATCTCCAGTCCGA
TGGGACCACCAGTCTGGCATTGACATTGATATATACATAATTCGAGTGATTCGACGGGATCACTCGCAGCCCGATTGTCTTAGTGTTTCCTTCATGTACACTAAA
GACCAGATTGTCCTAGATGTTCCTTCGTCCATTGCAATGATATCCGACAGAGAATGGCTGAGGATCCACCTAGGGCGGACAAACACTCAATATATACTCTTCTCC
TTGCTGAAAAGTATTTGTAAAAAGCATGGAGTTAAGGTTTATGCTTGTGTAGGTCGACAAAGAATTCGTGGAAGTTTTAGCATTCAGATAGATATCCGAGCTGAT
CTCATTGATGCATATATATCTGCTGTGCAAGAGGTTCTTTATCAAAATGATACTTTCCATAGCCTTAGGCAAGATGTGTTGTCCTATCTTGTGCGGAGCCCGTTG
GTTTTGCAAGAATCCATTGGAGCAGTAAAGTCATATTTGCGGCAATTGATTGATTTATAA
Protein sequenceShow/hide protein sequence
MLKLESKVKRKRIKLIGKFLLSAMEYFVWLKSPVRWDHQSGIDIDIYIIRVIRRDHSQPDCLSVSFMYTKDQIVLDVPSSIAMISDREWLRIHLGRTNTQYILFS
LLKSICKKHGVKVYACVGRQRIRGSFSIQIDIRADLIDAYISAVQEVLYQNDTFHSLRQDVLSYLVRSPLVLQESIGAVKSYLRQLIDL