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MELO3C035443 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035443
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionendoribonuclease Dicer homolog 2 isoform X2
Genome locationchr12:4786406..4790671
RNA-Seq ExpressionMELO3C035443
SyntenyMELO3C035443
Gene Ontology termsGO:0010216 - maintenance of DNA methylation (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0051214 - RNA virus induced gene silencing (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038236.1 endoribonuclease Dicer-like protein 2 isoform X2 [Cucumis melo var. makuwa]3.6e-2666.97Show/hide
Query:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI
        +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEI
Subjt:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI

Query:  VEEFRCGKV
        VEEFRCGKV
Subjt:  VEEFRCGKV

TYK30635.1 endoribonuclease Dicer-like protein 2 isoform X2 [Cucumis melo var. makuwa]3.6e-2666.97Show/hide
Query:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI
        +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEI
Subjt:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI

Query:  VEEFRCGKV
        VEEFRCGKV
Subjt:  VEEFRCGKV

XP_008443670.1 PREDICTED: endoribonuclease Dicer homolog 2 isoform X1 [Cucumis melo]3.6e-2666.97Show/hide
Query:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI
        +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEI
Subjt:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI

Query:  VEEFRCGKV
        VEEFRCGKV
Subjt:  VEEFRCGKV

XP_008443674.1 PREDICTED: endoribonuclease Dicer homolog 2 isoform X2 [Cucumis melo]3.6e-2666.97Show/hide
Query:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI
        +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEI
Subjt:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI

Query:  VEEFRCGKV
        VEEFRCGKV
Subjt:  VEEFRCGKV

XP_008443676.1 PREDICTED: endoribonuclease Dicer homolog 2 isoform X3 [Cucumis melo]3.6e-2666.97Show/hide
Query:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI
        +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEI
Subjt:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI

Query:  VEEFRCGKV
        VEEFRCGKV
Subjt:  VEEFRCGKV

TrEMBL top hitse value%identityAlignment
A0A1S3B8K1 endoribonuclease Dicer homolog 2 isoform X21.7e-2666.97Show/hide
Query:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI
        +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEI
Subjt:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI

Query:  VEEFRCGKV
        VEEFRCGKV
Subjt:  VEEFRCGKV

A0A1S3B8N2 endoribonuclease Dicer homolog 2 isoform X31.7e-2666.97Show/hide
Query:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI
        +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEI
Subjt:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI

Query:  VEEFRCGKV
        VEEFRCGKV
Subjt:  VEEFRCGKV

A0A1S3B9B7 endoribonuclease Dicer homolog 2 isoform X11.7e-2666.97Show/hide
Query:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI
        +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEI
Subjt:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI

Query:  VEEFRCGKV
        VEEFRCGKV
Subjt:  VEEFRCGKV

A0A5A7T7P3 Endoribonuclease Dicer-like protein 2 isoform X21.7e-2666.97Show/hide
Query:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI
        +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEI
Subjt:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI

Query:  VEEFRCGKV
        VEEFRCGKV
Subjt:  VEEFRCGKV

A0A5D3E5P7 Endoribonuclease Dicer-like protein 2 isoform X21.7e-2666.97Show/hide
Query:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI
        +PL     Y    D + + +A+ L  P+V   C+    +    SIEDIRCIVFVERIVSA+ALQTLLSLLLPKHTCWKTKYIAGSTS LQTQSKKKQNEI
Subjt:  SPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEI

Query:  VEEFRCGKV
        VEEFRCGKV
Subjt:  VEEFRCGKV

SwissProt top hitse value%identityAlignment
Q10HL3 Endoribonuclease Dicer homolog 2a2.1e-0847.69Show/hide
Query:  IEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV
        ++D+RCIVFVER+++++ L+ LLS  + + + W  K++AGS   L +QS+K   EIVE FR GKV
Subjt:  IEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV

Q3EBC8 Endoribonuclease Dicer homolog 23.0e-1557.58Show/hide
Query:  SIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV
        S+E+IRCI+FV+R+++A+ L++LL+ +LP    WKTKY+AG+ S LQ Q++KKQNEIVE+FR G V
Subjt:  SIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV

Q69LX2 Endoribonuclease Dicer homolog 2b3.5e-0846.15Show/hide
Query:  IEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV
        ++D+RCIVFV+R+++++ L+ LLS  + + + W  K++AGS   L +QS+K   EIVE FR GKV
Subjt:  IEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV

Q94F27 Hydroxyproline O-galactosyltransferase HPGT13.9e-0774.19Show/hide
Query:  DALGSTLASYLHKPRVYVGCMKSGEVFSEPS
        DALG+TLA++L  PR Y+GCMKSGEVFSEP+
Subjt:  DALGSTLASYLHKPRVYVGCMKSGEVFSEPS

Arabidopsis top hitse value%identityAlignment
AT3G03300.1 dicer-like 22.1e-1657.58Show/hide
Query:  SIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV
        S+E+IRCI+FV+R+++A+ L++LL+ +LP    WKTKY+AG+ S LQ Q++KKQNEIVE+FR G V
Subjt:  SIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV

AT3G03300.2 dicer-like 22.1e-1657.58Show/hide
Query:  SIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV
        S+E+IRCI+FV+R+++A+ L++LL+ +LP    WKTKY+AG+ S LQ Q++KKQNEIVE+FR G V
Subjt:  SIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV

AT3G03300.3 dicer-like 22.1e-1657.58Show/hide
Query:  SIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV
        S+E+IRCI+FV+R+++A+ L++LL+ +LP    WKTKY+AG+ S LQ Q++KKQNEIVE+FR G V
Subjt:  SIEDIRCIVFVERIVSAMALQTLLSLLLPKHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKV

AT5G53340.1 Galactosyltransferase family protein2.8e-0874.19Show/hide
Query:  DALGSTLASYLHKPRVYVGCMKSGEVFSEPS
        DALG+TLA++L  PR Y+GCMKSGEVFSEP+
Subjt:  DALGSTLASYLHKPRVYVGCMKSGEVFSEPS

AT5G53340.2 Galactosyltransferase family protein2.8e-0874.19Show/hide
Query:  DALGSTLASYLHKPRVYVGCMKSGEVFSEPS
        DALG+TLA++L  PR Y+GCMKSGEVFSEP+
Subjt:  DALGSTLASYLHKPRVYVGCMKSGEVFSEPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCCACCTTTGCTTCAATCTACACCGCTGGCCGCGGCATCGTAGACTGTAATATGCATAGGGAAGAAGCGGTGGTTGATAGTTCCATGGAGATTTCCCCT
CTCTTGAAGGAATATTACTACATCGAGAAATTTGATGCCCTAGGGAGCACACTTGCTTCTTACTTGCACAAACCTCGTGTCTATGTTGGGTGCATGAAATCTGGT
GAAGTATTCTCAGAACCGTCTATTGAGGATATAAGATGTATAGTATTTGTCGAAAGAATTGTTTCTGCTATGGCTCTTCAAACCCTATTGAGCTTATTGCTCCCA
AAACACACTTGCTGGAAAACCAAATATATAGCTGGATCGACCTCTAGTTTGCAAACCCAGTCAAAGAAGAAACAAAATGAAATTGTGGAAGAGTTTCGTTGTGGC
AAGGTTTTGCCAGAATTTATTCGAGCAGCGAAGCTATATTTGCGGCAATTCATTGATGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCCACCTTTGCTTCAATCTACACCGCTGGCCGCGGCATCGTAGACTGTAATATGCATAGGGAAGAAGCGGTGGTTGATAGTTCCATGGAGATTTCCCCT
CTCTTGAAGGAATATTACTACATCGAGAAATTTGATGCCCTAGGGAGCACACTTGCTTCTTACTTGCACAAACCTCGTGTCTATGTTGGGTGCATGAAATCTGGT
GAAGTATTCTCAGAACCGTCTATTGAGGATATAAGATGTATAGTATTTGTCGAAAGAATTGTTTCTGCTATGGCTCTTCAAACCCTATTGAGCTTATTGCTCCCA
AAACACACTTGCTGGAAAACCAAATATATAGCTGGATCGACCTCTAGTTTGCAAACCCAGTCAAAGAAGAAACAAAATGAAATTGTGGAAGAGTTTCGTTGTGGC
AAGGTTTTGCCAGAATTTATTCGAGCAGCGAAGCTATATTTGCGGCAATTCATTGATGTATAGGCATTTTTGTAGGTTTGGTAGGAA
Protein sequenceShow/hide protein sequence
MFATFASIYTAGRGIVDCNMHREEAVVDSSMEISPLLKEYYYIEKFDALGSTLASYLHKPRVYVGCMKSGEVFSEPSIEDIRCIVFVERIVSAMALQTLLSLLLP
KHTCWKTKYIAGSTSSLQTQSKKKQNEIVEEFRCGKVLPEFIRAAKLYLRQFIDV