; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C035459 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035459
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionSmall ribosomal subunit protein S13
Genome locationchr07:16895037..16895340
RNA-Seq ExpressionMELO3C035459
SyntenyMELO3C035459
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045600.1 hypothetical protein E6C27_scaffold243G001060 [Cucumis melo var. makuwa]3.3e-0475Show/hide
Query:  MVLELSKVGLAIRGRRWSFHVSGNEIFLAAFD
        MVLE  +VGL+I+GRRWSF VSGN++FLAAFD
Subjt:  MVLELSKVGLAIRGRRWSFHVSGNEIFLAAFD
KAA0047526.1 small ribosomal subunit protein S13 [Cucumis melo var. makuwa]1.1e-0469.44Show/hide
Query:  MVLELSKVGLAIRGRRWSFHVSGNEIFLAAFDGIRR
        +VLE  +VGLAIRGRRWSF VS N++FLAAF+ +RR
Subjt:  MVLELSKVGLAIRGRRWSFHVSGNEIFLAAFDGIRR
TrEMBL top hitse value%identityAlignment
A0A5A7TR50 Uncharacterized protein1.6e-0475Show/hide
Query:  MVLELSKVGLAIRGRRWSFHVSGNEIFLAAFD
        MVLE  +VGL+I+GRRWSF VSGN++FLAAFD
Subjt:  MVLELSKVGLAIRGRRWSFHVSGNEIFLAAFD
A0A5D3DT03 Small ribosomal subunit protein S135.5e-0569.44Show/hide
Query:  MVLELSKVGLAIRGRRWSFHVSGNEIFLAAFDGIRR
        +VLE  +VGLAIRGRRWSF VS N++FLAAF+ +RR
Subjt:  MVLELSKVGLAIRGRRWSFHVSGNEIFLAAFDGIRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTAGAGCTGTCAAAGGTTGGTTTAGCCATCAGAGGAAGACGTTGGAGTTTCCACGTTAGTGGCAATGAGATTTTTTTAGCAGCATTTGACGGCATCCGACGTTA
A
mRNA sequenceShow/hide mRNA sequence
ACAGTTTCTGGTGTCCAATAAGAAGAGAGACGTTGGTCAATGGAGGGGAAGACATTAGAGGTTTAGTCATGGGTTTCGAGGCGGACAAAAGATATGGTTTTGCACCGTTT
ACGGAAGCTCCGACGTTCGTTTCAATAGTGTCGCAACGTGTTTAACGACTGGTTTAACCATGGTTTTAGAGCTGTCAAAGGTTGGTTTAGCCATCAGAGGAAGACGTTGG
AGTTTCCACGTTAGTGGCAATGAGATTTTTTTAGCAGCATTTGACGGCATCCGACGTTAATCGTGGGTTTGCGGCGGGTTCTAA
Protein sequenceShow/hide protein sequence
MVLELSKVGLAIRGRRWSFHVSGNEIFLAAFDGIRR