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MELO3C035478 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035478
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr03:5597949..5598205
RNA-Seq ExpressionMELO3C035478
SyntenyMELO3C035478
Gene Ontology termsGO:0090481 - pyrimidine nucleotide-sugar transmembrane transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015165 - pyrimidine nucleotide-sugar transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037133.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-1182.61Show/hide
Query:  ATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKE
        ATI VSSPWVS  EKKGRGDEKNGVKV VF++RRS F RGGILKKE
Subjt:  ATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKE
KAA0048509.1 CMP-sialic acid transporter 4 isoform X2 [Cucumis melo var. makuwa]2.1e-1585.45Show/hide
Query:  GEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSS
        GE IN GRRNEKRKIKNSP TI VSSPWVS AEKKGRGDEKNGVKV VFVV  SS
Subjt:  GEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSS
KAA0054034.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-0879.07Show/hide
Query:  VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKES
        VSSPWVS  +KKGRGDEKNG KV VFV+RRSSF R GILKKE+
Subjt:  VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKES
TYJ96889.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-0879.07Show/hide
Query:  VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKES
        VSSPWVS  +KKGRGDEKNG KV VFV+RRSSF R GILKKE+
Subjt:  VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKES
TYK21269.1 thioredoxin H1-like isoform X1 [Cucumis melo var. makuwa]2.9e-0977.08Show/hide
Query:  GEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEV
        GEEIN GRRNEKRKIKNS ATI VSS WVS ++KK  GDEKNGVK+ V
Subjt:  GEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEV
TrEMBL top hitse value%identityAlignment
A0A5A7T2E4 Retrotransposon protein2.0e-1182.61Show/hide
Query:  ATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKE
        ATI VSSPWVS  EKKGRGDEKNGVKV VF++RRS F RGGILKKE
Subjt:  ATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKE
A0A5A7U4Z1 CMP-sialic acid transporter 4 isoform X21.0e-1585.45Show/hide
Query:  GEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSS
        GE IN GRRNEKRKIKNSP TI VSSPWVS AEKKGRGDEKNGVKV VFVV  SS
Subjt:  GEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSS
A0A5A7UFR0 Ty3-gypsy retrotransposon protein5.4e-0979.07Show/hide
Query:  VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKES
        VSSPWVS  +KKGRGDEKNG KV VFV+RRSSF R GILKKE+
Subjt:  VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKES
A0A5D3BCV7 Ty3-gypsy retrotransposon protein5.4e-0979.07Show/hide
Query:  VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKES
        VSSPWVS  +KKGRGDEKNG KV VFV+RRSSF R GILKKE+
Subjt:  VSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKES
A0A5D3DDC9 Thioredoxin H1-like isoform X11.4e-0977.08Show/hide
Query:  GEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEV
        GEEIN GRRNEKRKIKNS ATI VSS WVS ++KK  GDEKNGVK+ V
Subjt:  GEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGGAAGAGATAAACAGAGGGAGAAGAAACGAAAAAAGAAAGATCAAGAACTCACCGGCAACGATATTGGTCTCCTCACCGTGGGTCTCCTTTGCCGAGAAGAAAGGACG
TGGAGATGAGAAGAATGGGGTTAAGGTTGAGGTTTTCGTCGTGCGTCGTTCGTCGTTCGGGAGGGGAGGGATTTTGAAGAAGGAAAGTGAGGGATTT
mRNA sequenceShow/hide mRNA sequence
AGGGGAAGAGATAAACAGAGGGAGAAGAAACGAAAAAAGAAAGATCAAGAACTCACCGGCAACGATATTGGTCTCCTCACCGTGGGTCTCCTTTGCCGAGAAGAAAGGAC
GTGGAGATGAGAAGAATGGGGTTAAGGTTGAGGTTTTCGTCGTGCGTCGTTCGTCGTTCGGGAGGGGAGGGATTTTGAAGAAGGAAAGTGAGGGATTTTG
Protein sequenceShow/hide protein sequence
GEEINRGRRNEKRKIKNSPATILVSSPWVSFAEKKGRGDEKNGVKVEVFVVRRSSFGRGGILKKESEGF