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MELO3C035498 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035498
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTranscriptional corepressor LEUNIG_HOMOLOG-like isoform X2
Genome locationchr12:6590262..6591644
RNA-Seq ExpressionMELO3C035498
SyntenyMELO3C035498
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0030117 - membrane coat (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042275.1 transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. makuwa]1.1e-1686.21Show/hide
Query:  HTLHFNCIFVELSYTIESEEEGSSGAEEFWLFFQ-----ELKEKGELQSGEEGNSGVI
        HT  FNCIFVELSYTIESEEEGSSGAEEFWLFFQ     ELKE+GELQSGEEGNSGVI
Subjt:  HTLHFNCIFVELSYTIESEEEGSSGAEEFWLFFQ-----ELKEKGELQSGEEGNSGVI

KAA0051724.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-06100Show/hide
Query:  NCIFVELSYTIESEEEGSSGAEEFWLFFQ
        NCIFVELSYTIESEEEGSSGAEEFWLFFQ
Subjt:  NCIFVELSYTIESEEEGSSGAEEFWLFFQ

TYK01301.1 hypothetical protein E5676_scaffold827G00010 [Cucumis melo var. makuwa]1.4e-06100Show/hide
Query:  NCIFVELSYTIESEEEGSSGAEEFWLFFQ
        NCIFVELSYTIESEEEGSSGAEEFWLFFQ
Subjt:  NCIFVELSYTIESEEEGSSGAEEFWLFFQ

TYK03061.1 putative beta-1,3-galactosyltransferase 2 [Cucumis melo var. makuwa]9.4e-1689.8Show/hide
Query:  NYKINAYTKADLQCTNAYTKEVESCLPSDANINNVVKIGSVVGGTYFGS
        +YK NAYTKADLQCTNAYTKEVESCLPSDANINNV KIGS VGGTYF S
Subjt:  NYKINAYTKADLQCTNAYTKEVESCLPSDANINNVVKIGSVVGGTYFGS

XP_008464326.1 PREDICTED: AP-3 complex subunit sigma-like [Cucumis melo]5.0e-0989.19Show/hide
Query:  NYKINAYTKADLQCTNAYTKEVESCLPSDANINNVVK
        NYK NAYTKADLQC NAYTKEVESC PSDANINNV K
Subjt:  NYKINAYTKADLQCTNAYTKEVESCLPSDANINNVVK

TrEMBL top hitse value%identityAlignment
A0A1S3CL75 AP-3 complex subunit sigma-like2.4e-0989.19Show/hide
Query:  NYKINAYTKADLQCTNAYTKEVESCLPSDANINNVVK
        NYK NAYTKADLQC NAYTKEVESC PSDANINNV K
Subjt:  NYKINAYTKADLQCTNAYTKEVESCLPSDANINNVVK

A0A5A7TLF6 Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X25.4e-1786.21Show/hide
Query:  HTLHFNCIFVELSYTIESEEEGSSGAEEFWLFFQ-----ELKEKGELQSGEEGNSGVI
        HT  FNCIFVELSYTIESEEEGSSGAEEFWLFFQ     ELKE+GELQSGEEGNSGVI
Subjt:  HTLHFNCIFVELSYTIESEEEGSSGAEEFWLFFQ-----ELKEKGELQSGEEGNSGVI

A0A5A7U8R8 Reverse transcriptase6.6e-07100Show/hide
Query:  NCIFVELSYTIESEEEGSSGAEEFWLFFQ
        NCIFVELSYTIESEEEGSSGAEEFWLFFQ
Subjt:  NCIFVELSYTIESEEEGSSGAEEFWLFFQ

A0A5D3BNC8 Uncharacterized protein6.6e-07100Show/hide
Query:  NCIFVELSYTIESEEEGSSGAEEFWLFFQ
        NCIFVELSYTIESEEEGSSGAEEFWLFFQ
Subjt:  NCIFVELSYTIESEEEGSSGAEEFWLFFQ

A0A5D3BTL5 Putative beta-1,3-galactosyltransferase 24.6e-1689.8Show/hide
Query:  NYKINAYTKADLQCTNAYTKEVESCLPSDANINNVVKIGSVVGGTYFGS
        +YK NAYTKADLQCTNAYTKEVESCLPSDANINNV KIGS VGGTYF S
Subjt:  NYKINAYTKADLQCTNAYTKEVESCLPSDANINNVVKIGSVVGGTYFGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTTATAGAAGTAGTAGTGAAGAAAAAGAAACTGCTTAAACATCACACACTACATTTCAACTGCATCTTTGTTGAATTATCATACACCATAGAATCTGAAGAAGA
AGGAAGTTCTGGAGCTGAGGAGTTCTGGCTTTTTTTCCAGGAACTGAAGGAGAAAGGAGAGTTACAGAGTGGGGAAGAGGGAAATTCGGGTGTTATTAATTACAAAATAA
ATGCATATACAAAAGCAGACTTGCAATGCACAAATGCATATACAAAAGAGGTTGAGAGTTGCTTGCCTTCTGATGCAAATATCAATAATGTTGTGAAGATTGGCTCTGTA
GTTGGTGGTACTTATTTTGGCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTTATAGAAGTAGTAGTGAAGAAAAAGAAACTGCTTAAACATCACACACTACATTTCAACTGCATCTTTGTTGAATTATCATACACCATAGAATCTGAAGAAGA
AGGAAGTTCTGGAGCTGAGGAGTTCTGGCTTTTTTTCCAGGAACTGAAGGAGAAAGGAGAGTTACAGAGTGGGGAAGAGGGAAATTCGGGTGTTATTAATTACAAAATAA
ATGCATATACAAAAGCAGACTTGCAATGCACAAATGCATATACAAAAGAGGTTGAGAGTTGCTTGCCTTCTGATGCAAATATCAATAATGTTGTGAAGATTGGCTCTGTA
GTTGGTGGTACTTATTTTGGCTCATGAATTGGAGGTAGTAGAGGATGCAGAATGCAAGTTTATTTGAAGCTAAGTTTCATTCAAGGTCATTGAGTTGGGTTGATAGAAGT
AATGTTTTGTATATGACAATA
Protein sequenceShow/hide protein sequence
MKVIEVVVKKKKLLKHHTLHFNCIFVELSYTIESEEEGSSGAEEFWLFFQELKEKGELQSGEEGNSGVINYKINAYTKADLQCTNAYTKEVESCLPSDANINNVVKIGSV
VGGTYFGS