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MELO3C035559 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035559
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr12:9417740..9419868
RNA-Seq ExpressionMELO3C035559
SyntenyMELO3C035559
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039149.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.4e-4836.84Show/hide
Query:  CVQVIALKDNFQYVTVKLNKEV--------------------------------------------------------NLIKNKISLVGSELSTPKDIVH
        C+Q I L+DNFQYV VK NKEV                                                        +LIKNKISL GS+LSTPK+IVH
Subjt:  CVQVIALKDNFQYVTVKLNKEV--------------------------------------------------------NLIKNKISLVGSELSTPKDIVH

Query:  YIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPSIS-------------------------
        +I  EHGLSISYQKAWRA +VALDDI GS EDSYKM+P+F+YIL+LNN G+VVEYKVD D RFLYFFMAL  SIS                         
Subjt:  YIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPSIS-------------------------

Query:  --------------------------------------------------------------------------DFKHEMRSLESSAPSICEELKSIGFA
                                                                                  +FKHEMR LESSAP I EEL+ IGFA
Subjt:  --------------------------------------------------------------------------DFKHEMRSLESSAPSICEELKSIGFA

Query:  K-----------------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV----------IDGTFQ
        K                                                     NEVDYQVT FTKTIEG LR+QIERSRSMKV          ID T Q
Subjt:  K-----------------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV----------IDGTFQ

Query:  YVIYLPTKVCSCGMWDILKISCAHACVVFTMKHLSIK
        YVIYLPTK                    FTMKHLSIK
Subjt:  YVIYLPTKVCSCGMWDILKISCAHACVVFTMKHLSIK

KAA0046937.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-4847.97Show/hide
Query:  CVQVIALKDNFQYVTVKLNKEV--------------------------------NLIKNKISLVGSELSTPKDIVHYIRAEHGLSISYQKAWRAREVALD
        CVQVIAL+DNFQYVTVK NKEV                                +LIKNK SL  SELSTPKDIVH+IRAEHGLSISYQKAW AR  A D
Subjt:  CVQVIALKDNFQYVTVKLNKEV--------------------------------NLIKNKISLVGSELSTPKDIVHYIRAEHGLSISYQKAWRAREVALD

Query:  DIHGSPEDSYKMIPQFSYILKLNNP-------GTVVEYKVDLDGRFLYFFMALKPSI---------------------SDFKHEMRSLESSAPSICEELK
        DI GSPE+SY+M+P+F+YIL+LNNP         V+EYKVD+DGRFLYFFMAL  SI                      DF+HEMR LESSA  I +E +
Subjt:  DIHGSPEDSYKMIPQFSYILKLNNP-------GTVVEYKVDLDGRFLYFFMALKPSI---------------------SDFKHEMRSLESSAPSICEELK

Query:  SIGFAKNEVDY----QVTTFTKTIEGILREQIERSRSM----------------KVIDGTFQYVIYLPTKV
        SI FAK    Y    +    T  I   L   + ++R +                +V D T QYVIYLPTKV
Subjt:  SIGFAKNEVDY----QVTTFTKTIEGILREQIERSRSM----------------KVIDGTFQYVIYLPTKV

KAA0062727.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]5.5e-5839.38Show/hide
Query:  LYTNLRSKLGSIIDMNNIDIYIYLGPIECVKKDLAIMNDNDCVQVIALKDNFQYVTVKLNKEVNLIKNKISLV---------------------GSELST
        +Y +LRS L SIIDMNNIDIY+ LGPIEC KKDLAI NDND      +K  +  +T  + + + LI + +  +                     GSELST
Subjt:  LYTNLRSKLGSIIDMNNIDIYIYLGPIECVKKDLAIMNDNDCVQVIALKDNFQYVTVKLNKEVNLIKNKISLV---------------------GSELST

Query:  PKDIVHYIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPS---------------------
        PKDIVH+IRAEHGLSISYQK WRARE ALDDI GS ED YKM+P+F+YIL+LNNPG V+EYKVD DGRFLYFFMAL  S                     
Subjt:  PKDIVHYIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPS---------------------

Query:  ----------------------------------------------------------------------------------ISDFKHEMRSLESSAPSI
                                                                                          I DF+HEM  LESSA  I
Subjt:  ----------------------------------------------------------------------------------ISDFKHEMRSLESSAPSI

Query:  CEELKSIGFAK-----------------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMK-------
         E+++SIGFAK                                                     NE DYQVT FTKTIEGILRE IE SRSMK       
Subjt:  CEELKSIGFAK-----------------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMK-------

Query:  ---VIDGTFQYVIYLPTKV
           VIDGT QYVIYLPTKV
Subjt:  ---VIDGTFQYVIYLPTKV

TYK22525.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]2.2e-5440.37Show/hide
Query:  LYTNLRSKLGSIIDMNNIDIYIYLGPIECVKKDLAIMNDNDCVQVIALKDNFQYVTVKLNKEVNLIKNKISLV---------------------GSELST
        +Y +LRS L SIIDMNNIDIY+ LGPIEC KKDLAI NDND      +K  +  +T  + + + LI + +  +                     GSELST
Subjt:  LYTNLRSKLGSIIDMNNIDIYIYLGPIECVKKDLAIMNDNDCVQVIALKDNFQYVTVKLNKEVNLIKNKISLV---------------------GSELST

Query:  PKDIVHYIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPS---------------------
        PKDIVH+IRAEHGLSISYQK WRARE ALDDI GS ED YKM+P+F+YIL+LNNPG V+EYKVD DGRFLYFFMAL  S                     
Subjt:  PKDIVHYIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPS---------------------

Query:  --------------------------------------------------------------ISDFKHEMRSLESSAPSICEELKSIGFAK---------
                                                                      I DF+HEM  LESSA  I E+++SIGFAK         
Subjt:  --------------------------------------------------------------ISDFKHEMRSLESSAPSICEELKSIGFAK---------

Query:  --------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV
                                                    NE DYQVT FTKTIEGILRE IE SRSMKV
Subjt:  --------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV

XP_008463110.1 PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo]1.8e-4838.18Show/hide
Query:  CVQVIALKDNFQYVTVKLNKEV--------------------------------------------------------NLIKNKISLVGSELSTPKDIVH
        C+Q I L+DNFQYV VK NKEV                                                        +LIKNKISL GS+LSTPK+IVH
Subjt:  CVQVIALKDNFQYVTVKLNKEV--------------------------------------------------------NLIKNKISLVGSELSTPKDIVH

Query:  YIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPSISDFKH---------------------
        +I  EHGLSISYQKAWRA +VALDDI GS EDSYKM+P+F+YIL+LNN G+VVEYKVD D RFLYFFMAL  SIS ++H                     
Subjt:  YIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPSISDFKH---------------------

Query:  -----------------------------------------------EMRSLESSAPSICEELKSIGFAK------------------------------
                                                         R  +SSAP I EEL+ IGFAK                              
Subjt:  -----------------------------------------------EMRSLESSAPSICEELKSIGFAK------------------------------

Query:  -----------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV----------IDGTFQYVIYLPTKVCSCGMWDILKISCAHACVVFTM
                               NEVDYQVT FTKTIEG LR+QIERSRSMKV          ID T QYVIYLPTK                    FTM
Subjt:  -----------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV----------IDGTFQYVIYLPTKVCSCGMWDILKISCAHACVVFTM

Query:  KHLSIK
        KHLSIK
Subjt:  KHLSIK

TrEMBL top hitse value%identityAlignment
A0A1S3CIV7 uncharacterized protein LOC1035013368.6e-4938.18Show/hide
Query:  CVQVIALKDNFQYVTVKLNKEV--------------------------------------------------------NLIKNKISLVGSELSTPKDIVH
        C+Q I L+DNFQYV VK NKEV                                                        +LIKNKISL GS+LSTPK+IVH
Subjt:  CVQVIALKDNFQYVTVKLNKEV--------------------------------------------------------NLIKNKISLVGSELSTPKDIVH

Query:  YIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPSISDFKH---------------------
        +I  EHGLSISYQKAWRA +VALDDI GS EDSYKM+P+F+YIL+LNN G+VVEYKVD D RFLYFFMAL  SIS ++H                     
Subjt:  YIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPSISDFKH---------------------

Query:  -----------------------------------------------EMRSLESSAPSICEELKSIGFAK------------------------------
                                                         R  +SSAP I EEL+ IGFAK                              
Subjt:  -----------------------------------------------EMRSLESSAPSICEELKSIGFAK------------------------------

Query:  -----------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV----------IDGTFQYVIYLPTKVCSCGMWDILKISCAHACVVFTM
                               NEVDYQVT FTKTIEG LR+QIERSRSMKV          ID T QYVIYLPTK                    FTM
Subjt:  -----------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV----------IDGTFQYVIYLPTKVCSCGMWDILKISCAHACVVFTM

Query:  KHLSIK
        KHLSIK
Subjt:  KHLSIK

A0A5A7TCZ3 Protein FAR-RED ELONGATED HYPOCOTYL 3-like6.6e-4936.84Show/hide
Query:  CVQVIALKDNFQYVTVKLNKEV--------------------------------------------------------NLIKNKISLVGSELSTPKDIVH
        C+Q I L+DNFQYV VK NKEV                                                        +LIKNKISL GS+LSTPK+IVH
Subjt:  CVQVIALKDNFQYVTVKLNKEV--------------------------------------------------------NLIKNKISLVGSELSTPKDIVH

Query:  YIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPSIS-------------------------
        +I  EHGLSISYQKAWRA +VALDDI GS EDSYKM+P+F+YIL+LNN G+VVEYKVD D RFLYFFMAL  SIS                         
Subjt:  YIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPSIS-------------------------

Query:  --------------------------------------------------------------------------DFKHEMRSLESSAPSICEELKSIGFA
                                                                                  +FKHEMR LESSAP I EEL+ IGFA
Subjt:  --------------------------------------------------------------------------DFKHEMRSLESSAPSICEELKSIGFA

Query:  K-----------------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV----------IDGTFQ
        K                                                     NEVDYQVT FTKTIEG LR+QIERSRSMKV          ID T Q
Subjt:  K-----------------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV----------IDGTFQ

Query:  YVIYLPTKVCSCGMWDILKISCAHACVVFTMKHLSIK
        YVIYLPTK                    FTMKHLSIK
Subjt:  YVIYLPTKVCSCGMWDILKISCAHACVVFTMKHLSIK

A0A5A7TYE6 Ty3-gypsy retrotransposon protein6.6e-4947.97Show/hide
Query:  CVQVIALKDNFQYVTVKLNKEV--------------------------------NLIKNKISLVGSELSTPKDIVHYIRAEHGLSISYQKAWRAREVALD
        CVQVIAL+DNFQYVTVK NKEV                                +LIKNK SL  SELSTPKDIVH+IRAEHGLSISYQKAW AR  A D
Subjt:  CVQVIALKDNFQYVTVKLNKEV--------------------------------NLIKNKISLVGSELSTPKDIVHYIRAEHGLSISYQKAWRAREVALD

Query:  DIHGSPEDSYKMIPQFSYILKLNNP-------GTVVEYKVDLDGRFLYFFMALKPSI---------------------SDFKHEMRSLESSAPSICEELK
        DI GSPE+SY+M+P+F+YIL+LNNP         V+EYKVD+DGRFLYFFMAL  SI                      DF+HEMR LESSA  I +E +
Subjt:  DIHGSPEDSYKMIPQFSYILKLNNP-------GTVVEYKVDLDGRFLYFFMALKPSI---------------------SDFKHEMRSLESSAPSICEELK

Query:  SIGFAKNEVDY----QVTTFTKTIEGILREQIERSRSM----------------KVIDGTFQYVIYLPTKV
        SI FAK    Y    +    T  I   L   + ++R +                +V D T QYVIYLPTKV
Subjt:  SIGFAKNEVDY----QVTTFTKTIEGILREQIERSRSM----------------KVIDGTFQYVIYLPTKV

A0A5A7V6U1 Protein FAR1-RELATED SEQUENCE 3-like2.7e-5839.38Show/hide
Query:  LYTNLRSKLGSIIDMNNIDIYIYLGPIECVKKDLAIMNDNDCVQVIALKDNFQYVTVKLNKEVNLIKNKISLV---------------------GSELST
        +Y +LRS L SIIDMNNIDIY+ LGPIEC KKDLAI NDND      +K  +  +T  + + + LI + +  +                     GSELST
Subjt:  LYTNLRSKLGSIIDMNNIDIYIYLGPIECVKKDLAIMNDNDCVQVIALKDNFQYVTVKLNKEVNLIKNKISLV---------------------GSELST

Query:  PKDIVHYIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPS---------------------
        PKDIVH+IRAEHGLSISYQK WRARE ALDDI GS ED YKM+P+F+YIL+LNNPG V+EYKVD DGRFLYFFMAL  S                     
Subjt:  PKDIVHYIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPS---------------------

Query:  ----------------------------------------------------------------------------------ISDFKHEMRSLESSAPSI
                                                                                          I DF+HEM  LESSA  I
Subjt:  ----------------------------------------------------------------------------------ISDFKHEMRSLESSAPSI

Query:  CEELKSIGFAK-----------------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMK-------
         E+++SIGFAK                                                     NE DYQVT FTKTIEGILRE IE SRSMK       
Subjt:  CEELKSIGFAK-----------------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMK-------

Query:  ---VIDGTFQYVIYLPTKV
           VIDGT QYVIYLPTKV
Subjt:  ---VIDGTFQYVIYLPTKV

A0A5D3DG45 Protein FAR1-RELATED SEQUENCE 3-like1.0e-5440.37Show/hide
Query:  LYTNLRSKLGSIIDMNNIDIYIYLGPIECVKKDLAIMNDNDCVQVIALKDNFQYVTVKLNKEVNLIKNKISLV---------------------GSELST
        +Y +LRS L SIIDMNNIDIY+ LGPIEC KKDLAI NDND      +K  +  +T  + + + LI + +  +                     GSELST
Subjt:  LYTNLRSKLGSIIDMNNIDIYIYLGPIECVKKDLAIMNDNDCVQVIALKDNFQYVTVKLNKEVNLIKNKISLV---------------------GSELST

Query:  PKDIVHYIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPS---------------------
        PKDIVH+IRAEHGLSISYQK WRARE ALDDI GS ED YKM+P+F+YIL+LNNPG V+EYKVD DGRFLYFFMAL  S                     
Subjt:  PKDIVHYIRAEHGLSISYQKAWRAREVALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPS---------------------

Query:  --------------------------------------------------------------ISDFKHEMRSLESSAPSICEELKSIGFAK---------
                                                                      I DF+HEM  LESSA  I E+++SIGFAK         
Subjt:  --------------------------------------------------------------ISDFKHEMRSLESSAPSICEELKSIGFAK---------

Query:  --------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV
                                                    NE DYQVT FTKTIEGILRE IE SRSMKV
Subjt:  --------------------------------------------NEVDYQVTTFTKTIEGILREQIERSRSMKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTATAAAGAATTGTACACTAACCTTAGATCCAAGTTAGGTAGTATTATTGATATGAACAATATTGATATATACATTTACCTAGGTCCTATAGAATGTGTTAAGAA
GGATTTGGCTATAATGAATGATAATGATTGCGTACAAGTCATTGCTCTTAAAGATAATTTTCAATACGTTACTGTGAAATTAAACAAGGAAGTTAACCTAATTAAGAACA
AAATATCTTTAGTTGGTTCTGAATTGTCAACTCCCAAAGATATAGTTCATTACATTCGTGCTGAACATGGTTTAAGTATATCTTACCAAAAAGCATGGCGTGCTCGTGAG
GTTGCATTGGATGATATTCACGGATCTCCAGAGGACTCTTACAAGATGATACCCCAATTTTCATACATATTGAAACTCAACAACCCAGGTACTGTTGTTGAATACAAAGT
TGATCTCGATGGTAGATTTCTTTACTTCTTCATGGCATTAAAGCCTTCCATTTCTGACTTCAAACACGAAATGCGTTCGTTGGAATCTTCTGCCCCTAGTATATGTGAGG
AGCTTAAATCCATTGGTTTTGCTAAAAATGAAGTTGATTATCAAGTGACTACTTTTACCAAAACCATTGAAGGTATATTAAGGGAACAGATTGAACGTAGTCGATCAATG
AAGGTCATAGATGGAACCTTCCAATATGTTATTTACTTACCTACAAAGGTTTGTAGTTGCGGGATGTGGGATATATTGAAAATATCTTGTGCGCATGCATGTGTTGTTTT
CACCATGAAACATTTATCAATTAAGTCATATGTCTCACCTCTTTACTTGAATAGCACTTTAAGTTCAATATATAAACGCGTAATAAATCCCTTAGGTGATCATCGTCTAT
GGCAAAGACCTGATAATATTATGTCCATTGTCATCATTCTACCTAATGTAAAACGTGCAGTTGGTCGATCGAAGAAGATTAGAATTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTATAAAGAATTGTACACTAACCTTAGATCCAAGTTAGGTAGTATTATTGATATGAACAATATTGATATATACATTTACCTAGGTCCTATAGAATGTGTTAAGAA
GGATTTGGCTATAATGAATGATAATGATTGCGTACAAGTCATTGCTCTTAAAGATAATTTTCAATACGTTACTGTGAAATTAAACAAGGAAGTTAACCTAATTAAGAACA
AAATATCTTTAGTTGGTTCTGAATTGTCAACTCCCAAAGATATAGTTCATTACATTCGTGCTGAACATGGTTTAAGTATATCTTACCAAAAAGCATGGCGTGCTCGTGAG
GTTGCATTGGATGATATTCACGGATCTCCAGAGGACTCTTACAAGATGATACCCCAATTTTCATACATATTGAAACTCAACAACCCAGGTACTGTTGTTGAATACAAAGT
TGATCTCGATGGTAGATTTCTTTACTTCTTCATGGCATTAAAGCCTTCCATTTCTGACTTCAAACACGAAATGCGTTCGTTGGAATCTTCTGCCCCTAGTATATGTGAGG
AGCTTAAATCCATTGGTTTTGCTAAAAATGAAGTTGATTATCAAGTGACTACTTTTACCAAAACCATTGAAGGTATATTAAGGGAACAGATTGAACGTAGTCGATCAATG
AAGGTCATAGATGGAACCTTCCAATATGTTATTTACTTACCTACAAAGGTTTGTAGTTGCGGGATGTGGGATATATTGAAAATATCTTGTGCGCATGCATGTGTTGTTTT
CACCATGAAACATTTATCAATTAAGTCATATGTCTCACCTCTTTACTTGAATAGCACTTTAAGTTCAATATATAAACGCGTAATAAATCCCTTAGGTGATCATCGTCTAT
GGCAAAGACCTGATAATATTATGTCCATTGTCATCATTCTACCTAATGTAAAACGTGCAGTTGGTCGATCGAAGAAGATTAGAATTCCTTAA
Protein sequenceShow/hide protein sequence
MCYKELYTNLRSKLGSIIDMNNIDIYIYLGPIECVKKDLAIMNDNDCVQVIALKDNFQYVTVKLNKEVNLIKNKISLVGSELSTPKDIVHYIRAEHGLSISYQKAWRARE
VALDDIHGSPEDSYKMIPQFSYILKLNNPGTVVEYKVDLDGRFLYFFMALKPSISDFKHEMRSLESSAPSICEELKSIGFAKNEVDYQVTTFTKTIEGILREQIERSRSM
KVIDGTFQYVIYLPTKVCSCGMWDILKISCAHACVVFTMKHLSIKSYVSPLYLNSTLSSIYKRVINPLGDHRLWQRPDNIMSIVIILPNVKRAVGRSKKIRIP