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MELO3C035572 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035572
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr04:22088451..22088651
RNA-Seq ExpressionMELO3C035572
SyntenyMELO3C035572
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026022.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]8.7e-1685.71Show/hide
Query:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK
        MLPD FS GIG EA+SL+GEL CDPKRSKRWPMLPTSGERSSG RNHWK
Subjt:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK

KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]2.1e-1479.59Show/hide
Query:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK
        MLPDTFSQGIG +ASSL+GE RCDPK+SK WPMLPT  +RSSGV+NHWK
Subjt:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK

KAA0066117.1 mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo var. makuwa]1.0e-1689.8Show/hide
Query:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK
        MLPDTFS GIG EASSL+GEL CDPKRSKRWP LPTSGERSSGVRNHWK
Subjt:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]1.1e-1585.71Show/hide
Query:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK
        MLPDTFS GIG EASSL+GEL CDPK SKRWPMLPT GERSSG RNHWK
Subjt:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK

TYK23424.1 gag/pol protein [Cucumis melo var. makuwa]2.8e-1483.67Show/hide
Query:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK
        MLPD FSQGIG EASSL+GELRCDPK  KRWPML TSGE SSGVRN+WK
Subjt:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK

TrEMBL top hitse value%identityAlignment
A0A5A7SLK2 Retrovirus-related Pol polyprotein from transposon 17.64.2e-1685.71Show/hide
Query:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK
        MLPD FS GIG EA+SL+GEL CDPKRSKRWPMLPTSGERSSG RNHWK
Subjt:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK

A0A5A7VGB1 Mitochondrial intermembrane space import and assembly protein 405.0e-1789.8Show/hide
Query:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK
        MLPDTFS GIG EASSL+GEL CDPKRSKRWP LPTSGERSSGVRNHWK
Subjt:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK

A0A5D3DFP2 Uncharacterized protein5.5e-1685.71Show/hide
Query:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK
        MLPDTFS GIG EASSL+GEL CDPK SKRWPMLPT GERSSG RNHWK
Subjt:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK

A0A5D3DIF8 Gag/pol protein1.4e-1483.67Show/hide
Query:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK
        MLPD FSQGIG EASSL+GELRCDPK  KRWPML TSGE SSGVRN+WK
Subjt:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK

A0A5D3E5W4 NBS-LRR type resistance protein1.0e-1479.59Show/hide
Query:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK
        MLPDTFSQGIG +ASSL+GE RCDPK+SK WPMLPT  +RSSGV+NHWK
Subjt:  MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCCTGATACGTTTTCCCAAGGTATAGGTTGGGAAGCGAGCTCGTTGAAGGGAGAACTGAGGTGCGACCCAAAACGGTCCAAAAGATGGCCAATGCTTCCA
ACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGA
mRNA sequenceShow/hide mRNA sequence
GGGACTCGTACTTCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGATACGTTTTCCCAAGGTATAGGTTGGGAAGCGAGCTCGTTGAAGGGAGAACTGAGG
TGCGACCCAAAACGGTCCAAAAGATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGAACTTACAACAAA
Protein sequenceShow/hide protein sequence
MLPDTFSQGIGWEASSLKGELRCDPKRSKRWPMLPTSGERSSGVRNHWK