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MELO3C035596 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035596
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptiontraB domain-containing protein
Genome locationchr12:12378581..12380241
RNA-Seq ExpressionMELO3C035596
SyntenyMELO3C035596
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140793.1 traB domain-containing protein isoform X1 [Cucumis sativus]4.5e-3474.36Show/hide
Query:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV
        ESDGNGSSLQLYEKL FSY SLLQPLIHERDT+LA SLK SKAVNKSKRVV VIGR HMN                   GKKA EGNSNGFVS+LLK LV
Subjt:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV

Query:  RDTIIGVILWVLYEQLK
        RDTIIGVI+WVLYEQLK
Subjt:  RDTIIGVILWVLYEQLK

XP_008439166.1 PREDICTED: traB domain-containing protein [Cucumis melo]2.4e-3576.92Show/hide
Query:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV
        ESDGNGSSLQLYEKLSFSY SLLQPLIHERDT+LA SLK SKAVNKSKRVV VIGR HMN                   GKKA EGNSNGFVS+LLKSLV
Subjt:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV

Query:  RDTIIGVILWVLYEQLK
        RDTIIGVILWVLYEQLK
Subjt:  RDTIIGVILWVLYEQLK

XP_011651134.1 traB domain-containing protein isoform X2 [Cucumis sativus]4.5e-3474.36Show/hide
Query:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV
        ESDGNGSSLQLYEKL FSY SLLQPLIHERDT+LA SLK SKAVNKSKRVV VIGR HMN                   GKKA EGNSNGFVS+LLK LV
Subjt:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV

Query:  RDTIIGVILWVLYEQLK
        RDTIIGVI+WVLYEQLK
Subjt:  RDTIIGVILWVLYEQLK

XP_038876484.1 traB domain-containing protein isoform X1 [Benincasa hispida]1.8e-3068.6Show/hide
Query:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDT----HLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLL
        ES GNGSSLQLYEKLSFSY SLLQPLIHERDT    +LA SLK SKAVNKSK VV VIGR HMN                   GKKA E NSNGFVS+L+
Subjt:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDT----HLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLL

Query:  KSLVRDTIIGVILWVLYEQLK
        +SLVRDTIIGV+LW+LYEQLK
Subjt:  KSLVRDTIIGVILWVLYEQLK

XP_038876488.1 traB domain-containing protein isoform X2 [Benincasa hispida]3.2e-3270.94Show/hide
Query:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV
        ES GNGSSLQLYEKLSFSY SLLQPLIHERDT+LA SLK SKAVNKSK VV VIGR HMN                   GKKA E NSNGFVS+L++SLV
Subjt:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV

Query:  RDTIIGVILWVLYEQLK
        RDTIIGV+LW+LYEQLK
Subjt:  RDTIIGVILWVLYEQLK

TrEMBL top hitse value%identityAlignment
A0A0A0L5T2 Uncharacterized protein2.2e-3474.36Show/hide
Query:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV
        ESDGNGSSLQLYEKL FSY SLLQPLIHERDT+LA SLK SKAVNKSKRVV VIGR HMN                   GKKA EGNSNGFVS+LLK LV
Subjt:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV

Query:  RDTIIGVILWVLYEQLK
        RDTIIGVI+WVLYEQLK
Subjt:  RDTIIGVILWVLYEQLK

A0A1S3AXQ2 traB domain-containing protein1.2e-3576.92Show/hide
Query:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV
        ESDGNGSSLQLYEKLSFSY SLLQPLIHERDT+LA SLK SKAVNKSKRVV VIGR HMN                   GKKA EGNSNGFVS+LLKSLV
Subjt:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV

Query:  RDTIIGVILWVLYEQLK
        RDTIIGVILWVLYEQLK
Subjt:  RDTIIGVILWVLYEQLK

A0A6J1CGK3 traB domain-containing protein isoform X11.6e-2966.39Show/hide
Query:  LCESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKS
        L ES  NGSSLQLYE+L FSY SLLQPLIHERDT+LA SLK SKAVNKSKRVV VIGR HMN                   GKKA +  SNGFVS L++S
Subjt:  LCESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKS

Query:  LVRDTIIGVILWVLYEQLK
        LVRDT+IGV+LWV+YEQLK
Subjt:  LVRDTIIGVILWVLYEQLK

A0A6J1CHI0 traB domain-containing protein isoform X21.6e-2966.67Show/hide
Query:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV
        ES  NGSSLQLYE+L FSY SLLQPLIHERDT+LA SLK SKAVNKSKRVV VIGR HMN                   GKKA +  SNGFVS L++SLV
Subjt:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV

Query:  RDTIIGVILWVLYEQLK
        RDT+IGV+LWV+YEQLK
Subjt:  RDTIIGVILWVLYEQLK

A0A6J1HYE5 traB domain-containing protein isoform X35.2e-2866.67Show/hide
Query:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV
        E+  +GSSLQLYE+LSFSY SLLQPLIHERDT++A SLK SKAVNKSKRVV VIGR HMN                   GK+A E  SNGFVS+LL+SLV
Subjt:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMN-------------------GKKAREGNSNGFVSNLLKSLV

Query:  RDTIIGVILWVLYEQLK
        RDTIIGV+ WVLYEQLK
Subjt:  RDTIIGVILWVLYEQLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G52030.1 TraB family protein7.7e-2452.5Show/hide
Query:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMNG------------------------KKAREGNSNGFVSNL
        E+D N  SLQLYE+LSFSY +LL PLIHERDT+LA SLK SKAVN  K VV VIG+ HMNG                               SNG++  +
Subjt:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMNG------------------------KKAREGNSNGFVSNL

Query:  LKSLVRDTIIGVILWVLYEQ
        LKS VRDTIIG +LW LYEQ
Subjt:  LKSLVRDTIIGVILWVLYEQ

AT5G52030.2 TraB family protein7.7e-2452.5Show/hide
Query:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMNG------------------------KKAREGNSNGFVSNL
        E+D N  SLQLYE+LSFSY +LL PLIHERDT+LA SLK SKAVN  K VV VIG+ HMNG                               SNG++  +
Subjt:  ESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMNG------------------------KKAREGNSNGFVSNL

Query:  LKSLVRDTIIGVILWVLYEQ
        LKS VRDTIIG +LW LYEQ
Subjt:  LKSLVRDTIIGVILWVLYEQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGGAGGATGGATGGATAGATGGCTGCCTTATTCTTACTACTCTCTTCTTATGTGAATCCGATGGAAATGGTAGTTCTTTGCAGCTCTATGAGAAGCTTAGTTT
TTCTTATTCATCCCTCCTTCAACCTCTCATTCATGAACGAGATACCCACCTTGCATTGTCTCTAAAGTGTAGCAAGGCGGTGAACAAGAGCAAGAGGGTGGTTGAGGTGA
TTGGAAGAGACCATATGAACGGTAAGAAAGCTAGAGAAGGTAATTCCAATGGCTTTGTTAGCAATCTCCTGAAAAGCTTGGTTAGAGACACTATAATTGGTGTTATTTTA
TGGGTTTTATATGAACAATTAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTGGAGGATGGATGGATAGATGGCTGCCTTATTCTTACTACTCTCTTCTTATGTGAATCCGATGGAAATGGTAGTTCTTTGCAGCTCTATGAGAAGCTTAGTTT
TTCTTATTCATCCCTCCTTCAACCTCTCATTCATGAACGAGATACCCACCTTGCATTGTCTCTAAAGTGTAGCAAGGCGGTGAACAAGAGCAAGAGGGTGGTTGAGGTGA
TTGGAAGAGACCATATGAACGGTAAGAAAGCTAGAGAAGGTAATTCCAATGGCTTTGTTAGCAATCTCCTGAAAAGCTTGGTTAGAGACACTATAATTGGTGTTATTTTA
TGGGTTTTATATGAACAATTAAAATAA
Protein sequenceShow/hide protein sequence
MGLEDGWIDGCLILTTLFLCESDGNGSSLQLYEKLSFSYSSLLQPLIHERDTHLALSLKCSKAVNKSKRVVEVIGRDHMNGKKAREGNSNGFVSNLLKSLVRDTIIGVIL
WVLYEQLK