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MELO3C035598 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C035598
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionNon-LTR retroelement reverse transcriptase-like protein
Genome locationchr12:12375944..12376490
RNA-Seq ExpressionMELO3C035598
SyntenyMELO3C035598
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037172.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.6e-1190.91Show/hide
Query:  VKSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQG
        VKS PPTVSSLCFVL ISLSIF A TLRTSTHTPGMLPDTFSQG
Subjt:  VKSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQG

KAA0040927.1 hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa]7.4e-1245.87Show/hide
Query:  IFRARTLRTSTHTPGMLPDTFSQG-------------KGNGLSSMTFSVRPKKMQAIMPQTQFSRPGVKSGLPTVSSFYF----------VLVKTLSIFG
        +  ART RTS HTP MLP TF +G             KGNGL S TF VRPKKM+A +P TQFS PGVKS  PT+SS +           V +K +   G
Subjt:  IFRARTLRTSTHTPGMLPDTFSQG-------------KGNGLSSMTFSVRPKKMQAIMPQTQFSRPGVKSGLPTVSSFYF----------VLVKTLSIFG

Query:  VVLKRWSML
           K W  L
Subjt:  VVLKRWSML

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]8.4e-2460Show/hide
Query:  KSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKG-------------NGLSSMTFSVRPKKMQAIMPQTQFSRPGVKSGLPTVSSFYFV
        K  PPT+SSLC VLVISL IFRARTLRTSTHTPGM+ DTF  G G             NGLSS   S RP K +A MP+TQFSRPG KSG PTVSS   V
Subjt:  KSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKG-------------NGLSSMTFSVRPKKMQAIMPQTQFSRPGVKSGLPTVSSFYFV

Query:  LVKTLSIFGVVLKRWS-----MLPT--SGE
        LV +LSIFG    R S     MLP   SGE
Subjt:  LVKTLSIFGVVLKRWS-----MLPT--SGE

TYK15439.1 uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]2.8e-1142.62Show/hide
Query:  WVKSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKGNGLSSMTFSV--RPKKMQAIMPQTQFSRPGVKSGLPTVSSFYFVLVKTLSIFG
        WVKS PPTVSS+C VLVI LSIF A   RTSTHTPGMLPD FS G      S+   +   PK+ +                                   
Subjt:  WVKSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKGNGLSSMTFSV--RPKKMQAIMPQTQFSRPGVKSGLPTVSSFYFVLVKTLSIFG

Query:  VVLKRWSMLPTSGERSSIVKNH
            RW MLPTSG+RSS V+NH
Subjt:  VVLKRWSMLPTSGERSSIVKNH

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]4.8e-1141.91Show/hide
Query:  KSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKGNGLSSMTFSVRPKKMQAIMPQTQFSRPGV--KSGLPTVSSFYFVLV---------
        KS PPTVS+LC VLV SLSIF A T RTSTHTPGMLPDTFS+ +   LS +    +        P  +     V  +   P  S+    ++         
Subjt:  KSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKGNGLSSMTFSVRPKKMQAIMPQTQFSRPGV--KSGLPTVSSFYFVLV---------

Query:  -KTLSIFGVVL------KRWSMLPTSGERSSIVKNH
         +  S+ G +L      KRW MLPT GERSS  +NH
Subjt:  -KTLSIFGVVL------KRWSMLPTSGERSSIVKNH

TrEMBL top hitse value%identityAlignment
A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein4.1e-2460Show/hide
Query:  KSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKG-------------NGLSSMTFSVRPKKMQAIMPQTQFSRPGVKSGLPTVSSFYFV
        K  PPT+SSLC VLVISL IFRARTLRTSTHTPGM+ DTF  G G             NGLSS   S RP K +A MP+TQFSRPG KSG PTVSS   V
Subjt:  KSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKG-------------NGLSSMTFSVRPKKMQAIMPQTQFSRPGVKSGLPTVSSFYFV

Query:  LVKTLSIFGVVLKRWS-----MLPT--SGE
        LV +LSIFG    R S     MLP   SGE
Subjt:  LVKTLSIFGVVLKRWS-----MLPT--SGE

A0A5D3CGX3 Uncharacterized protein3.6e-1245.87Show/hide
Query:  IFRARTLRTSTHTPGMLPDTFSQG-------------KGNGLSSMTFSVRPKKMQAIMPQTQFSRPGVKSGLPTVSSFYF----------VLVKTLSIFG
        +  ART RTS HTP MLP TF +G             KGNGL S TF VRPKKM+A +P TQFS PGVKS  PT+SS +           V +K +   G
Subjt:  IFRARTLRTSTHTPGMLPDTFSQG-------------KGNGLSSMTFSVRPKKMQAIMPQTQFSRPGVKSGLPTVSSFYF----------VLVKTLSIFG

Query:  VVLKRWSML
           K W  L
Subjt:  VVLKRWSML

A0A5D3CQ36 Putative nuclease HARBI18.0e-1290.91Show/hide
Query:  VKSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQG
        VKS PPTVSSLCFVL ISLSIF A TLRTSTHTPGMLPDTFSQG
Subjt:  VKSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQG

A0A5D3CZ27 ULP_PROTEASE domain-containing protein1.4e-1142.62Show/hide
Query:  WVKSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKGNGLSSMTFSV--RPKKMQAIMPQTQFSRPGVKSGLPTVSSFYFVLVKTLSIFG
        WVKS PPTVSS+C VLVI LSIF A   RTSTHTPGMLPD FS G      S+   +   PK+ +                                   
Subjt:  WVKSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKGNGLSSMTFSV--RPKKMQAIMPQTQFSRPGVKSGLPTVSSFYFVLVKTLSIFG

Query:  VVLKRWSMLPTSGERSSIVKNH
            RW MLPTSG+RSS V+NH
Subjt:  VVLKRWSMLPTSGERSSIVKNH

A0A5D3DFP2 Uncharacterized protein2.3e-1141.91Show/hide
Query:  KSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKGNGLSSMTFSVRPKKMQAIMPQTQFSRPGV--KSGLPTVSSFYFVLV---------
        KS PPTVS+LC VLV SLSIF A T RTSTHTPGMLPDTFS+ +   LS +    +        P  +     V  +   P  S+    ++         
Subjt:  KSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKGNGLSSMTFSVRPKKMQAIMPQTQFSRPGV--KSGLPTVSSFYFVLV---------

Query:  -KTLSIFGVVL------KRWSMLPTSGERSSIVKNH
         +  S+ G +L      KRW MLPT GERSS  +NH
Subjt:  -KTLSIFGVVL------KRWSMLPTSGERSSIVKNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATTTATCATTTTTCTCAACCGACATTAAAGCGTATATTTCTTCTAGTGTGGGTAAAAAGCAGTCCCCCGACGGTTTCTTCCCTTTGCTTCGTATTGGTCATAAG
TCTTTCAATCTTCAGGGCTCGTACTCTGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACATTTTCCCAAGGCAAAGGAAATGGGCTGAGCTCGATGACTTTCA
GTGTTCGTCCTAAGAAAATGCAAGCGATAATGCCCCAGACCCAGTTTTCTCGTCCTGGAGTAAAAAGCGGTCTCCCAACGGTTTCTTCCTTTTACTTCGTATTGGTCAAA
ACTCTTTCGATCTTCGGAGTCGTACTCAAAAGATGGTCAATGCTTCCAACAAGTGGCGAACGCTCCTCCATTGTCAAAAACCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCATTTATCATTTTTCTCAACCGACATTAAAGCGTATATTTCTTCTAGTGTGGGTAAAAAGCAGTCCCCCGACGGTTTCTTCCCTTTGCTTCGTATTGGTCATAAG
TCTTTCAATCTTCAGGGCTCGTACTCTGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACATTTTCCCAAGGCAAAGGAAATGGGCTGAGCTCGATGACTTTCA
GTGTTCGTCCTAAGAAAATGCAAGCGATAATGCCCCAGACCCAGTTTTCTCGTCCTGGAGTAAAAAGCGGTCTCCCAACGGTTTCTTCCTTTTACTTCGTATTGGTCAAA
ACTCTTTCGATCTTCGGAGTCGTACTCAAAAGATGGTCAATGCTTCCAACAAGTGGCGAACGCTCCTCCATTGTCAAAAACCACTAG
Protein sequenceShow/hide protein sequence
MFIYHFSQPTLKRIFLLVWVKSSPPTVSSLCFVLVISLSIFRARTLRTSTHTPGMLPDTFSQGKGNGLSSMTFSVRPKKMQAIMPQTQFSRPGVKSGLPTVSSFYFVLVK
TLSIFGVVLKRWSMLPTSGERSSIVKNH